BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg311263
Length=3516
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01790.1 | Symbols: KEA1, ATKEA1 | K+ efflux antiporter 1 | ... 5251 0.0
AT4G00630.2 | Symbols: KEA2 | K+ efflux antiporter 2 | chr4:261... 1284 0.0
> AT1G01790.1 | Symbols: KEA1, ATKEA1 | K+ efflux antiporter 1
| chr1:284610-291094 FORWARD LENGTH=3892
Length=3892
Score = 5251 bits (2843), Expect = 0.0
Identities = 3138/3280 (96%), Gaps = 21/3280 (1%)
Strand=Plus/Plus
Query 243 TGCCGATACTAGTAATGATCGAATCAGGGAATCTTCCGGAAGTAGTGATGAAAGTGATGC 302
|||||||| || | || |||| ||| |||||||||||| |||||||||||||| ||| ||
Sbjct 403 TGCCGATAGTAATGATCATCGGATCGGGGAATCTTCCGAAAGTAGTGATGAAACTGAAGC 462
Query 303 TACAGATTTGAAAGAAGAAAAAGATGTTAGAGTCGAAAACGAAACTGATAGTTTGGAGGA 362
||||||||| | ||||||| ||||| |||||||| |||||||||||||||||
Sbjct 463 TACAGATTT-------G--AAAGATGCGAGAGTGGAAAACGACACTGATAGTTTGGAGGA 513
Query 363 ACTCAAGGAGTTACTTCAAAAGGCAATTAAAGAGTTGGAAGTTGCTAGACTCAATAGTAC 422
||||||||||||||| || |||||||||||||| |||||||||||||| |||||||||||
Sbjct 514 ACTCAAGGAGTTACTACACAAGGCAATTAAAGAATTGGAAGTTGCTAGGCTCAATAGTAC 573
Query 423 CATGTTTGAGGAAAAGGCTCAGAGAATCTCAGAAAGAGCCATAGCACTCAAGGATGAAGC 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 CATGTTTGAGGAAAAGGCTCAGAGAATCTCAGAAAGAGCCATAGCACTCAAGGATGAAGC 633
Query 483 TGCTACTGCTTGGCATGACGTAAACAAAACCCTTGATGTCATTCGAGATACTGTTGATGA 542
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 634 TGCTACTGCTTGGCTTGACGTAAACAAAACCCTTGATGTCATTCGAGATACTGTTTATGA 693
Query 543 GGAATCTCTTGCTAAAGAAGCTGTTCAAAAGGCTACTATGGCGTTATCTCTTGCTGAAGC 602
||| |||||||||||||||||||||||| |||||||||||| | ||||| ||||||||
Sbjct 694 GGAGGCTCTTGCTAAAGAAGCTGTTCAAACGGCTACTATGGCCCTGTCTCTGGCTGAAGC 753
Query 603 TAGGCTCCAGGTTATAGTGGAATCACTTGAAGCTGGTGCAGGGAATGATATTCCACATGT 662
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 TAGGCTTCAGGTTATAGTGGAATCACTTGAAGCTGGTGCAGGGAATGATATTCCACATGT 813
Query 663 GTCTGAAGAGACTGAGAAAACAGAT-GATGTGAAAGATAAAGAAGAAGCTCTTTTAGCTG 721
|||||||||||||||| ||||| || ||||| || |||||||||||||||||||||||||
Sbjct 814 GTCTGAAGAGACTGAGGAAACA-ATAGATGTTAATGATAAAGAAGAAGCTCTTTTAGCTG 872
Query 722 CCAAGGATGATATTAAAGAATGTCAA-TTGAATTTAGA-AATTTGTGAGTCCCAACTAAG 779
|||||||||||||||||||||| ||| || |||||||| || ||||||||||||||| ||
Sbjct 873 CCAAGGATGATATTAAAGAATGCCAAGTT-AATTTAGATAA-TTGTGAGTCCCAACTGAG 930
Query 780 TTG-TTTGCAGAGCAAAAAAGACGAGCTGCAGAAGGAAGTGGACAAGTTGAATGAGTTCG 838
|| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 931 -TGCTTTGCTGAGCAAAAAAGACGAGCTGCAAAAGGAAGTGGACAAGTTGAATGAGTTCG 989
Query 839 CTGAGACAATACAGATCAGTGCGTTGAAAGCCGAGGAGGATGTCGCCAATATTATGAAAT 898
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 990 CTGAGACAATACAGATCAGTTCGTTGAAAGCCGAGGAGGATGTTACCAATATTATGAAAT 1049
Query 899 TGGCTGAACAAGCTGTAGCATTTGAGCTTGAGGCTACTCAACGTGTTAATGATGCAGAGA 958
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1050 TGGCTGAACAAGCTGTAGCATTTGAGCTTGAGGCTACTCAACGCGTTAATGATGCAGAGA 1109
Query 959 TTGCTTTGCAGAGAGCTGAGAAGTCTCTCTCCATTTCTCAGACCCCAGAGGAAACTCAGG 1018
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110 TTGCTTTACAGAGAGCAGAGAAGTCTCTCTCCATTTCTCAGACCCCAGAGGAAACTCAGG 1169
Query 1019 GCCAACTCTCGGATGAAGAAA-GTCACGACGAGGATGAGGTGGTACTTTCAGGTAACGTT 1077
||||||||||||||||||||| || | | ||||||| | ||||||||||||||||||||
Sbjct 1170 GCCAACTCTCGGATGAAGAAACTTCTC-AGGAGGATGCGATGGTACTTTCAGGTAACGTT 1228
Query 1078 GAAGATGTTAGCCATCAGGTTGAAAAAGAATCACCTATTGATGGAGATCTATCAGTGGTA 1137
|||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 1229 GAAGATGTTACCCATCAGGTTGAAAAAGAATCACCTAAAGATGGAGATCTACCAGTGGTA 1288
Query 1138 CAGAACACATCTGATCTAGTGCCTGATTTAGTTGGTCAGAAGAATCAAAAACTAACTCAG 1197
|||| |||| |||| || ||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 1289 CAGATCACAGCTGAACTTGTGCCTGATATAGTTGGTCAGAGGAATAAAAAACTAACTCAG 1348
Query 1198 CCTTATGAGCCAAGCGATAATGAGAATGGAAAGCCAAGTGTAGAGTCTTCTAAAGTGGTT 1257
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1349 CCTTATGAGTCAAGCGATCATGAGAATGGAAAGCCAAGTGTAGAGTCTTCTAAAGTGGTT 1408
Query 1258 GAAGCAGAATGTGAAAAGCCAAAGATTAATGTTCAGACGAAAAAACAGGAAACACAGAAA 1317
|||||||| | ||||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 1409 GAAGCAGATTCTGAAAAGCCAAAGATTAATGTTCAGACAAAAAAACAGGAAACTCAAAAA 1468
Query 1318 GATCTGCCAAAGGAGGGTTCCTCTCTTAATTCTCCCAAGGCATCGTTTAATAAATCCTCC 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1469 GATCTGCCAAAGGAGGGTTCCTCTCTTAATTCTCCCAAGGCATCGTTTAATAAATCCTCC 1528
Query 1378 CGTTTCTTTTCTGCATCTTTCTTCTCTTCCAATCCAGATGGGACCGCGACAGTGTTTGCT 1437
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 1529 CGTTTCTTTTCTGCATCTTTCTTCTCTTCTAATCCAGATGGGACCGCGACAGTGTTTGGT 1588
Query 1438 AGTCTGGTTGGTTCTGTCAAACAGCAATGGCCCAAGCTAGTACTTGGGTTTGCTCTTCTT 1497
||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||
Sbjct 1589 AGTCTGGTTGGTTCTGTCAAACAGCAATGGCCCAAACTAGTTCTTGGGCTTGCTCTTCTT 1648
Query 1498 GGAGCAGGACTGACATTATACTCCAATGGAGTAGGGGGGAACAACCAGCTGCTTCAACAG 1557
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1649 GGAGCAGGACTGACATTATACTCCAATGGAGTAGGGGGGAACAACCAGTTGCTTCAACAG 1708
Query 1558 CCAGATGTTACCAGCACTAGTACAGAAGATATCTCTTCCAGTACGAAGCCATTGATCCGG 1617
|||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||
Sbjct 1709 CCAGATGTTACCAGCACTAGTACAGAAGATGTCTCTTCAAGTACGAAGCCACTGATCCGG 1768
Query 1618 CAAGTGCAGAAACTTCCCAAGAGATTTAAGAAACTACTTGAGATGCTCCCTCACCAGGAG 1677
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1769 CAAGTGCAGAAACTTCCCAAGAGAATTAAGAAACTACTTGAGATGATCCCTCACCAGGAG 1828
Query 1678 GTCAATGAGGAAGAAGCTTCCCtttttgattttttGTGGTTACTGCTAGCAAGCGTTATA 1737
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct 1829 GTCAATGAGGAAGAAGCTTCCCTCTTTGACTTTTTGTGGTTACTGCTAGCAAGCGTCATA 1888
Query 1738 TTTGTGCCTCTATTTCAGAAAATTCCTGGAGGCAGCCCTGTTCTTGGGTATTTGGCAGCT 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1889 TTTGTGCCTCTATTTCAGAAAATTCCTGGAGGCAGCCCTGTTCTTGGGTATTTGGCAGCT 1948
Query 1798 GGAATTCTGATTGGTCCTTATGGTCTTTCCATAATCCGTAATGTGCACGGAACCAGGGCC 1857
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1949 GGAATTCTGATTGGTCCGTATGGTCTTTCGATAATCCGTAATGTGCACGGAACCAGGGCC 2008
Query 1858 ATCGCAGAATTTGGAGTTGTTTTCTTGCTTTTCAACATCGGCCTTGAGCTATCTGTTGAA 1917
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2009 ATCGCAGAATTTGGAGTAGTTTTCTTGCTTTTCAACATCGGCCTTGAGCTATCTGTTGAA 2068
Query 1918 AGACTGAGTTCCATGAAGAAATATGTTTTTGGATTAGGCTCCGCTCAGGTTCTGGTCACA 1977
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2069 AGACTGAGTTCCATGAAGAAATATGTTTTTGGATTAGGCTCAGCTCAGGTTCTGGTGACG 2128
Query 1978 GCAGCAGTAGTTGGATTGATTGCCCATTATGTTGCTGGTCAGGCTGGTCCAGCAGCAATA 2037
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2129 GCAGCAGTAGTTGGATTGCTTGCCCATTATGTTGCTGGTCAGGCTGGTCCAGCAGCAATA 2188
Query 2038 GTGATTGGAAATGGCCTGGCTCTGTCCTCCACTGCTGTTGTCCTTCAGGTTCTACAAGAA 2097
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2189 GTGATTGGAAATGGCCTGGCTCTGTCGTCCACTGCTGTTGTCCTTCAGGTTCTACAAGAA 2248
Query 2098 CGAGGTGAGAGTACATCTAGACATGGAAGGGCTTCATTTTCCGTCTTGCTTTTCCAGGAT 2157
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2249 CGAGGCGAGAGTACATCTAGACATGGAAGGGCTTCATTTTCCGTCTTGCTTTTCCAGGAT 2308
Query 2158 CTAGCTGTAGTTGTTTTACTGATTCTCATCCCACTTATTTCACCTAATTCATCGAAAGGA 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2309 CTAGCTGTAGTTGTTTTACTGATTCTCATCCCACTTATTTCACCTAATTCATCGAAAGGA 2368
Query 2218 GGGATTGGATTCCAAGCCATTGCTGAAGCTCTTGGGCTTGCTGCAGTCAAAGCAGCAGTG 2277
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GGGATTGGATTTCAAGCCATTGCTGAAGCTCTTGGGCTTGCTGCAGTCAAAGCAGCAGTG 2428
Query 2278 GCTATTACTGCCATAATTGCTGGTGGCCGTCTTCTTCTTCGACCAATCTACAAGCAAATT 2337
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2429 GCTATTACTGCAATAATTGCTGGTGGCCGTCTACTTCTTCGACCAATCTACAAGCAAATT 2488
Query 2338 GCAGAAAATCGAAACGCCGAGATATTCTCTGCCAACACGCTTCTCGTTATTCTTGGGACT 2397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2489 GCAGAAAATCGAAACGCCGAGATATTCTCTGCCAACACGCTTCTCGTTATTCTTGGGACT 2548
Query 2398 AGTTTACTGACAGCTAGGGCTGGACTTTCCATGGCATTAGGAGCGTTTTTGGCTGGTCTA 2457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2549 AGTTTACTGACAGCTAGGGCTGGACTTTCCATGGCATTAGGAGCGTTTTTGGCTGGTCTA 2608
Query 2458 CTCCTTGCAGAGACAGAATTTTCGTTGCAAGTAGAATCAGATATTGCTCCATATCGTGGT 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2609 CTCCTTGCAGAGACAGAATTTTCGTTGCAAGTAGAATCAGATATTGCTCCATATCGTGGT 2668
Query 2518 CTTCTGCTGGGACTCTTCTTCATGACGGTTGGCATGTCAATTGATCCGAAATTACTTCTC 2577
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2669 CTTCTGTTGGGACTCTTCTTCATGACGGTTGGAATGTCAATTGATCCGAAATTACTTCTC 2728
Query 2578 TCCAACTTCCCTGTCATAGTGGGAACTTTGGGACTCTTGATTGTGGG-AAAGACTATGTT 2636
||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||
Sbjct 2729 TCCAACTTCCCTGTCATAGTGGGAACTTTGGGACTCTTGATAGTGGGCAAA-ACTATGTT 2787
Query 2637 AGTCGTGATTATGGGAAAAGTGTTTGGCATTTCAATTATATCTGCAATTCGAGTCGGTCT 2696
||||||||||||||||||| |||| ||||| ||||| |||||||||||||| ||||||||
Sbjct 2788 AGTCGTGATTATGGGAAAATTGTTCGGCATATCAATAATATCTGCAATTCGGGTCGGTCT 2847
Query 2697 ACTATTGGCCCCAGGCGGAGAATTTGCATTTGTTGCTTTCGGAGAAGCTGTTAATCAGGG 2756
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2848 ACTATTGGCCCCAGGCGGAGAGTTTGCATTTGTTGCTTTCGGAGAAGCTGTTAATCAGGG 2907
Query 2757 TATAATGTCTCCTCAGTTATCTTCGTTGCTATTTCTTGTCGTGGGAATCTCAATGGCTAT 2816
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2908 TATAATGTCTCCTCAGTTATCTTCGTTGCTATTCCTTGTCGTGGGAATCTCAATGGCTAT 2967
Query 2817 CACACCCTGGTTAGCTGCTGGTGGCCAGTTAATTGCATCTCGATTTGAGTTGCATGATGT 2876
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2968 CACACCCTGGTTAGCTGCTGGTGGCCAGTTAATTGCATCTCGTTTTGAGTTGCATGATGT 3027
Query 2877 TCGAAGTTTATTGCCTGTTGAGAGTGAGACGGATGATTTACAGGATCACATAATTATTTG 2936
||||||||||||||| || ||||||||||| |||||||| |||| |||||||||||||||
Sbjct 3028 TCGAAGTTTATTGCCCGTCGAGAGTGAGACAGATGATTTGCAGGGTCACATAATTATTTG 3087
Query 2937 CGGATTTGGTCGAGTTGGTCAGATAATTGCTCAGCTTCTCTCGGAAAGACTTATCCCATT 2996
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3088 TGGATTTGGTCGAGTTGGTCAGATAATTGCTCAACTTCTCTCGGAAAGACTTATCCCATT 3147
Query 2997 TGTTGCCCTCGATGTCAGCAGTGATAGAGTGACTATTGGGCGTTCTTTGGATCTTCCTGT 3056
||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 3148 TGTTGCCCTTGATGTCAGCAGTGATAGAGTGACTATCGGGCGTTCCTTGGATCTTCCTGT 3207
Query 3057 TTATTTCGGAGACGCTGGTAGTAGAGAGGTTCTCCACAAAATTGGAGCTGAGAGAGCATG 3116
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 3208 TTATTTCGGAGACGCTGGTAGTAAAGAGGTTCTCCACAAAATTGGAGCTGGGAGAGCATG 3267
Query 3117 TGCTGCTGTGGTTGCCTTAGACGCACCAGGAGCAAACTACAGATGTGTCTGGGCTTTGAG 3176
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3268 TGCTGCTGTGGTTGCCTTAGACGCACCAGGAGCAAACTACAGATGTGTTTGGGCTTTGAG 3327
Query 3177 CAAGTATTACCCCAATGTCAAAACTTTTGTCCGTGCACACGATGTTGTTCATGGTCTTAA 3236
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3328 CAAGTTTTACCCCAATGTCAAAACTTTTGTCCGTGCTCACGATGTTGTTCATGGTCTTAA 3387
Query 3237 TCTAGAAAAAGCTGGTGCTACTGCGGTTGTCCCGGAGACTCTGGAGCCTAGTCTACAGTT 3296
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3388 TCTAGAAAAAGCCGGTGCTACTGCAGTTGTCCCGGAGACTCTGGAGCCTAGTCTACAGTT 3447
Query 3297 GGCAGCTGCTGTTCTTGCTCAGGCAAAATTACCGACATCGGAAATTGCAAACACGATTAA 3356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3448 GGCAGCTGCTGTTCTTGCTCAGGCAAAATTACCGACATCGGAAATTGCAAACACGATTAA 3507
Query 3357 CGAGTTCAGAACCCGTCACTTGTCTGAACTGACCGAGCTATGTGAAGCAAGCGGAAGCTC 3416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3508 CGAGTTCAGAACCCGTCACTTGTCTGAACTGACCGAGCTATGTGAAGCAAGCGGAAGCTC 3567
Query 3417 TCTAGGCTATGGGTACTCGAGGACGAGTAAGCCTAAACCTCAACCGTCGGATGCATCTGG 3476
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 3568 TCTAGGCTATGGGTACTCTAGGACGAGTAAGCCTAAACCTCAACCATCGGATGCATCTGG 3627
Query 3477 CGATAACCAGATAATCGAAGGAGGCACAGTAGCAATCTGA 3516
|||||||||||||||||||||||||||||| | |||||||
Sbjct 3628 CGATAACCAGATAATCGAAGGAGGCACAGTCGTAATCTGA 3667
Score = 202 bits (109), Expect = 2e-50
Identities = 133/145 (92%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 1 ATGGATTTTGCGTCTACTTTTCAACGGCCGACTCTATTTCATGGTGGAGACGGTGCGAGT 60
||||| | |||||||||||||||| |||||| |||||| ||||||||||| |||||||||
Sbjct 86 ATGGAGTATGCGTCTACTTTTCAAAGGCCGATTCTATTCCATGGTGGAGATGGTGCGAGT 145
Query 61 TACTGCTTTCCAAATCGATTTATAAGTCCCAAAGGAATCAACATTACGTTTGGGGATTCT 120
|||||||||||||||||||| |||||||| |||||||||| |||||| | ||||||||||
Sbjct 146 TACTGCTTTCCAAATCGATTGATAAGTCCTAAAGGAATCAGCATTACATCTGGGGATTCT 205
Query 121 AAAGTGCACTCGTGTTTTCGATTGA 145
|||||||| ||||||||||||||||
Sbjct 206 AAAGTGCATTCGTGTTTTCGATTGA 230
> AT4G00630.2 | Symbols: KEA2 | K+ efflux antiporter 2 | chr4:261449-268031
REVERSE LENGTH=4006
Length=4006
Score = 1284 bits (695), Expect = 0.0
Identities = 1036/1201 (86%), Gaps = 22/1201 (2%)
Strand=Plus/Plus
Query 2311 CTTCTTCGACCAATCTACAAGCAAATTGCAGAAAATCGAAACGCCGAGATATTCTCTGCC 2370
||||| || || || |||||||||||||||||||| ||||| || ||||||||||| |||
Sbjct 2592 CTTCTGCGGCCGATATACAAGCAAATTGCAGAAAACCGAAATGCTGAGATATTCTCCGCC 2651
Query 2371 AACACGCTTCTCGTTATTCTTGGGACTAGTTTACTGACAGCTAGGGCTGGACTTTCCATG 2430
|| || ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 2652 AATACACTTCTGGTTATTCTTGGGACTAGTTTACTTACAGCTAGGGCGGGACTTTCCATG 2711
Query 2431 GCATTAGGAGCGTTTTTGGCTGGTCTACTCCTTGCAGAGACAGAATTTTCGTTGCAAGTA 2490
||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 2712 GCATTAGGAGCGTTTTTGGCTGGTCTACTACTTGCAGAGACTGAATTTTCCTTGCAAGTT 2771
Query 2491 GAATCAGATATTGCTCCATATCGTGGTCTTCTGCTGGGACTCTTCTTCATGACGGTTGGC 2550
||||||||||| |||||||| |||||||||||| |||||||||||||||||||||| |||
Sbjct 2772 GAATCAGATATCGCTCCATACCGTGGTCTTCTGTTGGGACTCTTCTTCATGACGGTGGGC 2831
Query 2551 ATGTCAATTGATCCGAAA-TTACTTCTCTCCAACTTCCCTGTCATAGTGGGAACTTTGGG 2609
||||| |||||||| ||| || |||||| ||||||||||| ||||| |||| || || ||
Sbjct 2832 ATGTCCATTGATCCAAAACTT-CTTCTCGCCAACTTCCCTCTCATAATGGGGACCTTAGG 2890
Query 2610 ACTCTTGATT-GTGGGAAAGACTATGTTAGTCGTGATTATGGGAAAAGTGTTTGGCATTT 2668
|||||| ||| || || |||||||| ||||| ||||| || || ||| ||||||||||||
Sbjct 2891 ACTCTT-ATTAGTTGGCAAGACTATATTAGTGGTGATCATAGGCAAATTGTTTGGCATTT 2949
Query 2669 CAATTATATCTGCAATTCGAGTCGGTCTACTAT-TGGCCCCAGGCGGAGAATTTGCATTT 2727
|||| |||||||| | | |||||||| || | |||| ||||| |||||||| || |||
Sbjct 2950 CAATCATATCTGCCGTGAGGGTCGGTCTTCT-TCTGGCTCCAGGTGGAGAATTCGCGTTT 3008
Query 2728 GTTGCTTTCGGAGAAGCTGTTAATCAGGGTATAATGTCTCCTCAGTTATCTTCGTTGCTA 2787
|||||||| ||||||||||| ||||||||||||||| |||| ||| ||||||| || ||
Sbjct 3009 GTTGCTTTTGGAGAAGCTGTCAATCAGGGTATAATGACTCCGCAGCTATCTTCATTACTG 3068
Query 2788 TTTCTTGTCGTGGGAATCTCAATGGCTATCACACCCTGGTTAGCTGCTGGTGGCCAGTTA 2847
||||| ||||||||||| ||||||||| | || || |||||||||||||| ||||| |||
Sbjct 3069 TTTCTCGTCGTGGGAATATCAATGGCTCTTACTCCTTGGTTAGCTGCTGGCGGCCAATTA 3128
Query 2848 ATTGCATCTCGATTTGAGTTGCATGATGTTCGAAGTTTATTGCCTGTTGAGAGTGAGACG 2907
||||| |||||||||||||| || ||||||||||||||||| || ||||| || ||||||
Sbjct 3129 ATTGCGTCTCGATTTGAGTTACAAGATGTTCGAAGTTTATTACCAGTTGAAAGCGAGACG 3188
Query 2908 GATGATTTACAGGATCACATAATTATTTGCGGATTTGGTCGAGTTGGTCAGATAATTGCT 2967
||||||||||||| |||||| ||||||||||||||||| ||| |||| |||||||| |||
Sbjct 3189 GATGATTTACAGGGTCACATCATTATTTGCGGATTTGGACGAATTGGGCAGATAATCGCT 3248
Query 2968 CAGCTTCTCTCGGAAAGACTTATCCCATTTGTTGCCCTCGATGTCAGCAGTGATAGAGT- 3026
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3249 CAGCTTCTTTCTGAAAGACTTATCCCATTTGTTGCCCTCGATGTCAGCAGTGATAGAGTA 3308
Query 3027 GACTATTGGGCGTTCTTTGGATCTTCCTGTTTATTTCGGAGACGCTGGTAGTAGAGAGGT 3086
| | ||||| ||||| | |||||||| |||||||| |||||||||||||||||||||||
Sbjct 3309 G-CAATTGGTCGTTCCCTAGATCTTCCAGTTTATTTTGGAGACGCTGGTAGTAGAGAGGT 3367
Query 3087 TCTCCACAAAATTGGAGCTGAGAGAGCATGTGCTGCTG-TGGTTGCCTTAGACGCACCAG 3145
||||||||||| || || || |||||||||||||| | | |||| |||||| |||| |
Sbjct 3368 ACTCCACAAAATCGGGGCAGATAGAGCATGTGCTGCGGCTA-TTGCTTTAGACACACCTG 3426
Query 3146 GAGCAAACTACAGATGTGTCTGGGCT-TTGAGCAAGTATTACCCCAATGTCAAAACTTTT 3204
||||||| ||||| |||||||||||| || ||||| |||| ||||||||||||||| |||
Sbjct 3427 GAGCAAATTACAGGTGTGTCTGGGCTCTT-AGCAAATATTTCCCCAATGTCAAAACCTTT 3485
Query 3205 GTCCGTGCACACGATGTTGTTCATGGTCTTAATCTAGAAAAAGCTGGTGCTACTGCGGTT 3264
||||||||||| || |||| ||||||||| ||||| |||||||| || ||||| || |||
Sbjct 3486 GTCCGTGCACATGACGTTGATCATGGTCTCAATCTTGAAAAAGCCGGCGCTACCGCTGTT 3545
Query 3265 GTCCCGGAGACTCTGGAGCCTAGTCTACAGTTGGCAGCTGCTGTTCTTGCTCAGGCAAAA 3324
|| || ||||| ||||| || ||||| ||||| ||||||||||||||||| ||||| |||
Sbjct 3546 GTTCCTGAGACGCTGGAACCAAGTCTTCAGTTAGCAGCTGCTGTTCTTGCACAGGCCAAA 3605
Query 3325 TTACCGACATCGGAAATTGCAAACA-CGATTAACGAGTTCAGAACCCGTCACTTGTCTGA 3383
||||| ||||| ||||| |||| || |||| |||||||||||| | ||||||||||||||
Sbjct 3606 TTACCTACATCAGAAATAGCAA-CAACGATCAACGAGTTCAGATCTCGTCACTTGTCTGA 3664
Query 3384 ACTGACC-GAGCTATGTGAAGCAAGCGGAAGCTCTCTAGGCTATGGGTACTCGAG--G-A 3439
||| | | ||||||||||| ||||| |||||||||||||| || |||| ||| || | |
Sbjct 3665 ACT-AGCTGAGCTATGTGAGGCAAGTGGAAGCTCTCTAGGTTACGGGTTCTCAAGAAGTA 3723
Query 3440 CGAGTAAGCCTAAACCTC-A--ACCGTCGGATGCATCTGGCGATAACCAGATAATCGAAG 3496
|||| || || ||||| | | ||| || || |||||| |||||||||||| || ||||
Sbjct 3724 CGAGCAAACCAAAACCACCATCACCATCTGAAACATCTGACGATAACCAGATTATTGAAG 3783
Query 3497 G 3497
|
Sbjct 3784 G 3784
Score = 1182 bits (640), Expect = 0.0
Identities = 969/1129 (86%), Gaps = 18/1129 (2%)
Strand=Plus/Plus
Query 1192 ACTCAGCCTTATGAGCCAAGCGATAATGAGAATGGAAAGCCAAGTGTAGAGTCTT-CTAA 1250
|||||| |||| ||| | | ||||||||||| |||||||||| || ||| | || ||||
Sbjct 1443 ACTCAGTCTTACGAGTC-A--GATAATGAGAACGGAAAGCCAACTGCAGA-TTTTGCTAA 1498
Query 1251 AGTGGTTGAAGCAGAATG-TGAAAAGCCAAAGATTAATGTTCAGACGAAAAAACAGGAAA 1309
|| || ||||| |||| | || ||| |||||| | ||||| ||| ||||||||||||
Sbjct 1499 AGAGGCTGAAGGAGAA-GCAGAGAAGTCAAAGAATGTTGTTCTGACAAAAAAACAGGAAG 1557
Query 1310 CACAGAAAGATCTGCCAAAGGAGGGTTCCTCTCTTAATTCTCCCAAGGCATCGTTTAATA 1369
|||||||||||||||| |||| |||| |||| |||| | ||||| |||| || || |
Sbjct 1558 TGCAGAAAGATCTGCCAAGGGAGAGTTCATCTCATAATGGTACCAAGACATCATTGAAGA 1617
Query 1370 AATCCTCCCGTTTCTTTTCTGCATCTTTCTTCTCTTCCAATCCAGATGGGACCGCGACAG 1429
||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||| ||||
Sbjct 1618 AATCCTCTCGTTTCTTTCCTGCATCTTTCTTCTCTTCCAATGGGGATGGAACCGCAACAG 1677
Query 1430 TGTTTGCTAGTCTGGTTGGTTCTGTC-AAACAGCAATGGCCCAAGCTAGTACTTGGGTTT 1488
| |||| ||| | |||| |||| | |||||||| ||||| |||||| | ||||| |||
Sbjct 1678 TTTTTGAGAGTTTAGTTGAATCTG-CGAAACAGCAGTGGCCTAAGCTAATTCTTGGATTT 1736
Query 1489 GCTCTTCTTGGAGCAGGACTGACATTATACTCCAATGGAGTAGGGGGGAACAACCAGCTG 1548
| |||||||| |||||| || || | || ||||| |||||||| ||||||| ||||||
Sbjct 1737 ACACTTCTTGGGGCAGGAGTGGCAATCTATTCCAACGGAGTAGGAAGGAACAATCAGCTG 1796
Query 1549 CTTCAACAGCCAGATGTTACCAGCACTAGTACAGAAGATATCTCTTCCAGTACGAAGCCA 1608
| ||||||||| || || ||||||||| |||||||| | || ||||| || || ||
Sbjct 1797 CCACAACAGCCAAATATTGTCAGCACTAGCGCAGAAGATGTTTCCTCCAGCACAAAACC- 1855
Query 1609 T-TGATCCGGCAAG-TGCAGAAACTTCCCAAGAGATTTAAGAAACTACTTGAGATGCTCC 1666
| ||||||| | || ||||||||||||| |||||| | |||||||||||||||||| |||
Sbjct 1856 TCTGATCCGTC-AGATGCAGAAACTTCCAAAGAGAATAAAGAAACTACTTGAGATGTTCC 1914
Query 1667 CTCACCAGGAGGTCAATGAGGAAGAAGCTTCCCtttttgattttttGTGGTTACTGCTAG 1726
|||| || ||||| |||||||| |||||||||||| | ||| | |||||||||||||| |
Sbjct 1915 CTCAGCAAGAGGTTAATGAGGAGGAAGCTTCCCTTCTCGATGTGTTGTGGTTACTGCTTG 1974
Query 1727 CAAGCGTTATATTTGTGCCTCTATTTCAGAAAATTCCTGGAGGCAGCCCTGTTCTTGGGT 1786
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1975 CAAGCGTCATATTCGTGCCTCTATTTCAGAAAATTCCTGGAGGCAGCCCTGTTCTTGGGT 2034
Query 1787 ATTTGGCAGCTGGAATTC-TGATTGGTCCTTATGGTCTTTCCATAATCCGTAATGTGCAC 1845
||||||| || |||| || ||||||||||||||||||| || ||||| |||||||||||
Sbjct 2035 ATTTGGCGGCGGGAA-TCTTGATTGGTCCTTATGGTCTCTCAATAATTCGTAATGTGCAT 2093
Query 1846 GGAACCAGGGCCATCGCAGAATTTGGAGTTGTTTTCTTGCTTTTCAACATCGGCCTTGAG 1905
||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 2094 GGAACCAAGGCCATTGCAGAATTTGGAGTTGTCTTCTTGCTTTTCAACATTGGCCTTGAG 2153
Query 1906 CTATCTGTTGAAAGACTGAGTTCCATGAAGAAATATGTTTTTGGATTAGGCTCCGCTCAG 1965
|| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2154 CTCTCTGTCGAAAGGCTTAGTTCCATGAAGAAATATGTTTTTGGATTAGGCTCCGCGCAG 2213
Query 1966 GTTCTGGTCACAGCAGCAGTAGTTGGATTGATTGCCCATTATGTTGCTGGTCAGGCTGGT 2025
|||||||| || ||||||||| |||| ||||| | || |||||||||||||||||||||
Sbjct 2214 GTTCTGGTAACGGCAGCAGTAATTGGTTTGATCACTCACTATGTTGCTGGTCAGGCTGGT 2273
Query 2026 CCAGCAGCAATAGTGATTGGAAATGGCCTGGC-TCTGTCCTCCACTGCTGTTGTCCTTCA 2084
|||||||||||||| ||||| ||||||||||| | |||| ||||||||||||||||| ||
Sbjct 2274 CCAGCAGCAATAGTAATTGGCAATGGCCTGGCAT-TGTCTTCCACTGCTGTTGTCCTGCA 2332
Query 2085 GGTTCTACAAGAACGAGGTGAGAGTACATCTAGACATGGAAGGGCTTCATTTTCCGTCTT 2144
|||| |||||||||| |||||||| || || ||||||||| | ||| ||||||| |||||
Sbjct 2333 GGTTTTACAAGAACGGGGTGAGAGCACCTCGAGACATGGACGAGCTACATTTTCGGTCTT 2392
Query 2145 GCTTTTCCAGGATCTAGCTGTAGTTGTTTTACTGATTCTCATCCCACTTATTTCACCTAA 2204
|||||| |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct 2393 GCTTTTTCAGGATCTGGCTGTGGTCGTGTTACTGATTCTCATCCCACTTATTTCACCTAA 2452
Query 2205 TTCATCGAAAGGAGGGATTGGATTCCAAGCCATTGCTGAAGCTCTTGGGCTTGCTGCAGT 2264
|||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||| |
Sbjct 2453 TTCATCCAAAGGAGGGATTGGATTTCAAGCCATTGCTGAAGCTCTTGGACTAGCTGCAAT 2512
Query 2265 CAAAGCAGCAGTGGCTATTACTGCCATAATTGCTGGTGGCCGTCTTCTT 2313
|||||||||||| ||||| |||| ||||||||||||||||||||| |||
Sbjct 2513 CAAAGCAGCAGTTGCTATCACTGGCATAATTGCTGGTGGCCGTCT-CTT 2560
Score = 488 bits (264), Expect = 1e-136
Identities = 521/643 (81%), Gaps = 26/643 (4%)
Strand=Plus/Plus
Query 351 TAGTTTGGAGGAACTCAAGGAGT-TACTTCAA-AAGGCAATTAAAGAGTTGGAAGTTGCT 408
||||||||||||||||| ||| | ||| | || ||||||| |||||| |||||||| |||
Sbjct 665 TAGTTTGGAGGAACTCAGGGA-TCTAC-TGAATAAGGCAACTAAAGAATTGGAAGTGGCT 722
Query 409 AGACTCAATAGTACCATGTTTGAGGAAAAGGCTCAGAGAATCTCAGAAAG-AGCCATAGC 467
|| ||||| |||||||||||||| |||||||||||||| || |||| | | ||| |||||
Sbjct 723 AGTCTCAACAGTACCATGTTTGAAGAAAAGGCTCAGAGGATTTCAG-AGGTAGCGATAGC 781
Query 468 ACTCAAGGATGAAGCTGCTACTGCTTGGCATGACGTAAACAAAACCCTTGATGTCATTCG 527
||| ||||||||||| || | ||| ||| | || |||||| |||| ||| |||| |||
Sbjct 782 ACTTAAGGATGAAGCAGCCAGTGCGTGGAACGATGTAAACCAAACACTTAATGTGGTTCA 841
Query 528 AGATACTGTTGATGAGGAATCTC-TTGCTAAAGAAGCTGTTCAAAAGGCTACTATGGCGT 586
||| |||||||||| || || | ||||||||||||||||||| |||||||||||||| |
Sbjct 842 AGAGGCTGTTGATGAAGAGTC-CGTTGCTAAAGAAGCTGTTCAGAAGGCTACTATGGCAT 900
Query 587 TATCTCTTGCTGAAGCTAGGCTCCAGGTTATAGTGGAATCACTTGAAGCTGGTGCAGGGA 646
||||||| |||||||| ||||| |||||| | | |||||||| ||||| | ||||
Sbjct 901 TATCTCTGGCTGAAGCAAGGCTGCAGGTTGCACTTGAATCACTAGAAGC---AGAAGGG- 956
Query 647 ATGATATTCCACATGTGTCTGAAGAGACTGAGAAAACAGATGATGTGAAAGATAAAGAAG 706
| | | | || | |||||||||| |||| | ||||| ||| ||||||||||| |
Sbjct 957 -T-ACAAT--AC---T-TCTGAAGAGAGTGAGGTTAGAGATGGTGTTAAAGATAAAGAGG 1008
Query 707 AAGCTCTTTTAGCTGCCAAGGATGATATTAAAGAATGTCAATTGAATTTAGAAATTTGTG 766
|||| |||||| |||| |||| ||| || |||||||| ||| ||||||| || ||||
Sbjct 1009 AAGCCCTTTTATCTGCTAAGGCTGACATAAAAGAATGCCAAGAAAATTTAGCAAGCTGTG 1068
Query 767 AGTCCCAACTAAGTTGTTTGCAGAG-CAAAAAAGACGAGCTGCAGAAGGAAGTGGACAAG 825
|| ||||| || ||||||| || || || |||||||||||||||||||| || ||
Sbjct 1069 AGGAACAACTCAGGCGTTTGCA-AGTTAAGAAGGACGAGCTGCAGAAGGAAGTAGA-TAG 1126
Query 826 -TTGAATGA-GTTCGCTGAGACAATACAGATCAGTGCGTTGAAAGCCGAGGAGGATGTCG 883
|||||||| | | || |||| | |||||||| || |||||||||||||||||||| |
Sbjct 1127 ATTGAATGAGGCT-GCCGAGAGAGCGCAGATCAGCGCATTGAAAGCCGAGGAGGATGTTG 1185
Query 884 CCAATATTATGAAATTGGCTGAACAAGCTGTAGCATTTGAGCTTGAGGCTACTCAACGTG 943
| ||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1186 CAAATATCATGGTTTTGGCCGAACAAGCTGTGGCATTTGAGCTTGAGGCTACTCAACGTG 1245
Query 944 TTAATGATGCAGAGATTGCTTTGCAGAGAGCTGAGAAGTCTCT 986
| ||||||||||||||||||||||| ||||| |||||| ||||
Sbjct 1246 TGAATGATGCAGAGATTGCTTTGCAAAGAGCAGAGAAGACTCT 1288
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 175032464127
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5