BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg311286
Length=3747
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01510.1 | Symbols: AN | NAD(P)-binding Rossmann-fold superf... 3277 0.0
AT1G01500.1 | Symbols: | Erythronate-4-phosphate dehydrogenase... 1585 0.0
AT1G01520.1 | Symbols: | Homeodomain-like superfamily protein ... 523 4e-147
AT4G01280.2 | Symbols: | Homeodomain-like superfamily protein ... 252 2e-65
> AT1G01510.1 | Symbols: AN | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:187211-190056 FORWARD LENGTH=2155
Length=2155
Score = 3277 bits (1774), Expect = 0.0
Identities = 1863/1907 (98%), Gaps = 2/1907 (0%)
Strand=Plus/Plus
Query 976 AGCGAGAAGAAGAAGGAGATGAGCAAGATCCGTTCGTCTGCGACAATGCCACATCGCGAC 1035
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7 AGCGAGAAGAAGGAGGAGATGAGCAAGATCCGTTCGTCTGCGACAATGCCACATCGCGAC 66
Query 1036 CAGCCGTCACCGGCGTCGCCTCACGTCGTTACACTCAACTGTATAGAGGATTGTGCGCTC 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67 CAGCCGTCACCGGCGTCGCCTCACGTCGTTACACTCAACTGTATAGAGGATTGTGCGCTC 126
Query 1096 GAGCAAGACTCCCTCGCCGGCGTTGCTGGTGTCGAATACGTCCCGCTCAGCCGCATCGCC 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 127 GAGCAAGACTCCCTCGCCGGCGTTGCTGGTGTCGAATACGTCCCGCTCAGCCGCATCGCC 186
Query 1156 GATGGTAAGATCGAGTCCGCCACCGCCGTTCTCCTCCATTCCCTCGCGTATCTTCCACGA 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 GATGGTAAGATCGAGTCCGCCACCGCCGTTCTCCTCCATTCCCTCGCGTATCTTCCACGA 246
Query 1216 GCAGCTCAACGCCGACTCCGTCCTCACCAGCTCATTCTCTGCCTTGGCTCTGCTGATCGC 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 GCAGCTCAACGCCGACTCCGTCCTCACCAGCTCATTCTCTGCCTTGGCTCTGCTGATCGC 306
Query 1276 GCTGTCGATTCGACTCTCGCCGCCGACCTAGGTCTCCGACTTGTCCATGTCGATACTTCC 1335
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 307 GCTGTCGATTCGACTCTCGCCGCCGACCTAGGTCTCCGACTTGTCCATGTAGATACTTCA 366
Query 1336 CGAGCCGAGGAAATCGCGGACACTGTAATGGCGCTCATCCTTGGACTCCTTCGACGGACG 1395
|||||||||||||||||||| || || |||||||||||||||||||||||||||||||||
Sbjct 367 CGAGCCGAGGAAATCGCGGATACCGTCATGGCGCTCATCCTTGGACTCCTTCGACGGACG 426
Query 1396 CATTTACTCTCGCGACACGCTTTATCGGCGTCTGGATGGCTTGGATCGCTTCAGCCTCTT 1455
||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||
Sbjct 427 CATTTACTCTCGCGACACGCTCTATCGGCGTCTGGTTGGCTCGGATCGCTTCAGCCTCTT 486
Query 1456 TGCCGGGGAATGAGACGGTGCCGTGGTATGGTTTTGGGTATCGTTGGCAGATCTGTGTCT 1515
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 487 TGCCGGGGAATGAGACGGTGCCGTGGTATGGTTTTGGGTATCGTTGGCAGATCTGTATCG 546
Query 1516 GCTCGGTATTTGGCTAGTAGAAGCTTAGCTTTCAAGATGAGTGTGCTCTACTTCGATGTC 1575
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 547 GCTCGGTATTTAGCTAGTAGAAGCTTGGCTTTCAAGATGAGTGTGCTCTACTTCGATGTC 606
Query 1576 CCAGAGGGAGATGAAGATCGAATCAGGCCCTCGAGATTCCCACGTGCTGCTCGGAGAATG 1635
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 607 CCAGAGGGAGATGAAGAACGAATCAGGCCCTCGAGATTCCCACGTGCTGCTCGAAGAATG 666
Query 1636 GATACATTGAATGATCTTCTAGCAGCAAGTGATGTAATTTCGCTTCATTGTGCATTAACA 1695
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 667 GATACATTGAATGATCTTCTAGCAGCAAGTGATGTCATTTCGCTACATTGTGCATTAACA 726
Query 1696 AATGACACGGTTCAGATACTCAATGCAGAGTGTTTGCAGCATATAAAACCTGGGGCTTTT 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 727 AATGACACGGTTCAGATACTCAATGCAGAGTGTTTGCAGCATATAAAACCTGGGGCTTTT 786
Query 1756 CTTGTAAATACTGGAAGCTGCCAGCTATTGGATGATTGTGCTGTGAAACAACTTCTAATT 1815
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 787 CTTGTAAATACTGGAAGCTGCCAGCTGTTGGATGATTGTGCTGTGAAACAACTTCTAATT 846
Query 1816 GACGGCACTATAGCTGGCTGCGCCCTTGACGGTGCTGAAGGTCCACAATGGATGGAAGCA 1875
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 847 GATGGCACTATAGCTGGCTGCGCCCTTGACGGTGCTGAAGGTCCACAATGGATGGAAGCA 906
Query 1876 TGGGTGAAGGAAATGCCAAATGTGTTAATTCTACCTCGCAGCGCAGATTACAGTGAGGAA 1935
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 907 TGGGTGAAGGAAATGCCAAATGTGTTAATTCTACCTCGCAGTGCAGATTACAGTGAGGAA 966
Query 1936 GTATGGATGGAGATAAGGGAGAAGGCCATCTCTATCTTGCATTCATTTTTCTTAGATGGT 1995
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 967 GTATGGATGGAGATAAGGGAGAAGGCTATCTCTATCTTGCATTCATTTTTCTTAGATGGT 1026
Query 1996 GTCATCCCAAGTAACACTGTTTCTGACGAGGAAGTTGAGGAAAGTGAAGCAAGTGAAGAA 2055
|| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1027 GTAATTCCAAGTAACACTGTTTCTGATGAGGAAGTTGAGGAAAGTGAAGCAAGTGAAGAA 1086
Query 2056 GAAGAACAATCACCTATCAAACACGAGAAATTAGCAATAGTGGAATCCACCAGTAGGCAA 2115
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1087 GAAGAACAATCACCTAGCAAACACGAGAAATTAGCAATAGTGGAATCCACCAGTAGGCAA 1146
Query 2116 CAGGGAGAAAGTACTCTCACCAGCACTGAGATCGTTCGTAGAGAGGCTAGTGAGTTAAAG 2175
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1147 CAGGGAGAAAGTACTCTCACCAGCACTGAGATCGTACGTAGAGAGGCTAGTGAGTTAAAA 1206
Query 2176 GAATCTCTGAGCCCTGGTCAGCAACACGTTTCTCAAAATACTGCCGTAAAACCTGAAGGA 2235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1207 GAATCTCTGAGCCCTGGTCAGCAACACGTTTCTCAAAATACTGCCGTAAAACCTGAAGGA 1266
Query 2236 AGACGTAGCAGATCCGGTAAGAAAGCCAAAAAGAGACATTCACAGCAAAAATACATGCAA 2295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1267 AGACGTAGCAGATCCGGTAAGAAAGCCAAAAAGAGACATTCACAGCAAAAATACATGCAA 1326
Query 2296 AAAGCGGAGGGTTCCTCAGGGTTAAATGAAGAAAGTACTTCACGAAGAGATGATATTGCT 2355
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1327 AAAACGGATGGTTCCTCAGGGTTAAATGAAGAAAGTACTTCACGAAGAGATGATATTGCT 1386
Query 2356 ATGAGTGACACGGAAGAAGTATTAAGTTCCAGTTCTAGATGTGCTTCTCCTGAAGATTCC 2415
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1387 ATGAGTGACACAGAAGAAGTATTAAGTTCCAGTTCTAGATGTGCTTCTCCTGAAGATTCC 1446
Query 2416 AGAAGTAGGAAAACACCTCTTGAAGTAATGCAAGAGTCTTCCCCAAGTCAGCTTGTAATG 2475
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1447 AGAAGTAGGAAAACACCTCTTGAAGTAATGCAAGAGTCTTCCCCAAATCAGCTTGTAATG 1506
Query 2476 TCAAGTAAGAAGTTCATTGGAAAGTCAAGTGAGCTGCTGAAAGATGGATATGTTGTAGCC 2535
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1507 TCAAGTAAGAAGTTCATTGGAAAGTCAAGTGAGCTACTGAAAGATGGATATGTAGTAGCC 1566
Query 2536 TTATATGCGAAAGACCTCTCGGGCCTTCACGTTTCCAGGCAAAGAACGAAAAACGGGGGT 2595
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1567 TTGTATGCGAAAGACCTCTCGGGCCTCCACGTTTCCAGGCAAAGAACGAAAAACGGTGGC 1626
Query 2596 TGGTTCCTCGATACTTTGTCCAATGTATCCAAACGGGATCCTGCTGCACAATTCATCATC 2655
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1627 TGGTTCCTCGATACTTTGTCCAATGTATCCAAACGAGATCCTGCTGCACAATTCATTATC 1686
Query 2656 GCATACAGAAACAAGGACACTGTTGG-CTTGAGATCATTTGCTGCTGGTGGGAAGTTGCT 2714
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||
Sbjct 1687 GCATACAGAAACAAGGACACTGTTGGTCT-GAGATCATTTGCTGCTGGTGGGAAGTTACT 1745
Query 2715 GCAGATCAATAGAAGAATGGAGTTTGTGTTTGCTAGCCATAGTTTTGACGTGTGGGAGAG 2774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1746 GCAGATCAATAGAAGAATGGAGTTTGTGTTTGCTAGCCATAGTTTTGACGTGTGGGAGAG 1805
Query 2775 TTGGAGTCTAGAAGGTTCTCTGGACGAATGCCGGCTTGTTAACTGCAGGAATTCCTCTGC 2834
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1806 TTGGAGTCTAGAAGGTTCTCTGGACGAATGTCGGCTTGTTAACTGCAGGAATTCCTCTGC 1865
Query 2835 GGTGTTGGACGTTCGTGTGGAAATATTGGCAATGGTAGGAGACGATG 2881
||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1866 GGTGTTGGACGTTCGTGTGGAGATATTGGCAATGGTAGGAGACGATG 1912
> AT1G01500.1 | Symbols: | Erythronate-4-phosphate dehydrogenase
family protein | chr1:185133-186923 FORWARD LENGTH=1461
Length=1461
Score = 1585 bits (858), Expect = 0.0
Identities = 938/977 (96%), Gaps = 3/977 (0%)
Strand=Plus/Plus
Query 1 ATGATTTCGAAAGATCACAATCATCATCAGGATCCTCTGGGTACAACGAAATCGTACAAC 60
|||||||||||||||||| |||||||| |||||||||||||||||| ||||||||| ||
Sbjct 128 ATGATTTCGAAAGATCACCTTCATCATCTGGATCCTCTGGGTACAACCAAATCGTACCAC 187
Query 61 ATGAAAACCTCCGCCGTATCGCCGCCGCCGTCGTCGACATCATCAATTGCGTTGTCGCAA 120
||||| |||||| |||||||||||||| | || || ||||||||||| |||||||||||
Sbjct 188 ATGAATACCTCCACCGTATCGCCGCCGTC-TC--CGGCATCATCAATTTCGTTGTCGCAA 244
Query 121 TCGGCGTGGCTGGAGGTTCGTTTGTTCTACGTCCGTATCGCTCCTTGCGTCGTTGAGAAC 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245 TCGGCGTGGCTGGAGGTTCGTTTGTTCTACGTCCGTATCGCTCCTTGCGTCGTTGAGAAC 304
Query 181 GTCCCTGACTTTCTTACCCTCCGTCACCCTCGTCGCGAAACCGGTGCTTCTCTTGAGGTT 240
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 305 GTCCCTGACTTCCTCACCCTCCGTCACCCTCGTCGCGAAACCGGTGCTTCTCTTGAGGTT 364
Query 241 AACGGCGTTCGCGTTCCTTCGTCTCAGACGGCGTCGCTTAAACTTCGCCGTGACAGAGTC 300
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 365 AACGGCGTTCGCGTTCCTTCGTCGCAGACGGCGTCGCTTAAACTCCGCCGTGACAGAGTC 424
Query 301 GACCGGGAATCGTCGGAGGTGACGTACGTTAGCACTGAGACCGTTCGCGTTACCGGATGC 360
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 425 GACCGGGAATCGTCGGAGGTGACTTACGTGAGCACTGAGACCGTTCGCGTTACCGGATGC 484
Query 361 GTTGATTTCGAGGTTTATGATAACGACGATATGGTCTTGTGTGGGAACCTAGATAGAATC 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 485 GTTGATTTCGAGGTTTATGATAACGAGGATATGGTCTTGTGTGGGAACCTAGATAGAATC 544
Query 421 GAAGGTGCTTGGAACAATGGAACTGTGAGTGATCCCAAGACTGGATGGGGCATGGATTGT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 545 GAAGGTGCTTGGAACAATGGAACTGTGAGTGATCCCAAGACTGGATGGGGCATGGATTGT 604
Query 481 TACATTGCTATGGGAAACGGACACGTGTCAGGTCCTTCTTCTTCTGCGTTTTTCCAGCCA 540
||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct 605 TACATTGCTATGGGAAACGGACACGTGTCAGGTCCTTCTGCCTCTGTGTTTTTCCAGCCA 664
Query 541 AAGCTTGGAGTTTCGTCTCCATCCGTGGAGGTTTATATAGCTGGTTGTTGTGGTGGTGTT 600
||| ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 665 AAGTTTGGAGTCTCGTCTCCGTCCGTCGAGGTTTATATAGCTGGTTGTTGTGGTGGTGTC 724
Query 601 CCGGTGATATTGACCAAGACGATTCAGGCGAGTCCCAGGAGGAAGGTGGCTAGGCACGTG 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 725 CCGGTGATATTGACCAAGACGATTCAGGCGAGTCCGAGGAGGAAGGTGGCTAGGCACGTG 784
Query 661 ACACTCGACGCTATCCCTGAGGACGAGGAAGTTGGCAAAGGGCAAGACGTTGGTACCATT 720
||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||
Sbjct 785 ACACTCGACGCTATCCCTGAGGATGAGGAAGTTGGCAAAGAGCAAGACATTGGTACCATT 844
Query 721 GGTGATGAATTGGCCCGGCAAAGCAAAGTACATATGATGGAATCAGAAGTTGATGACTAC 780
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct 845 GGTGATGAATTGGCCCGTCAAAGCAAAGTACAGATGATGGAATCAGAAGTTGATGAATAC 904
Query 781 GATGACTCTGAGATGAAAATGGCACAGAGATATTACCCTGAAGGGATGTACGTTGATGAG 840
|||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 905 GATGACTCAGATATGAAAATGGCACAGAGATATTACCCTGAAGGAATGTACGTTGATGAG 964
Query 841 GATGGTCAGCTCTCATGGTTCAATGCAGGTGTCAGAGTCGGAGTTGGGATAGGCCTTGGG 900
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 965 GATGGTCAGCTCTCATGGTTCAATGCAGGAGTCAGAGTCGGAGTTGGGATAGGCCTTGGG 1024
Query 901 ATGTGTCTTGGTGTAGGCATTGGAGTTGGATTACTCATGCGTTCGTATCAAGCAACAACT 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1025 ATGTGTCTTGGTGTAGGCATTGGAGTTGGATTACTCATGCGTTCGTATCAAGCAACAACT 1084
Query 961 AGTAACCTTCGTAGGAG 977
|||||||||||||||||
Sbjct 1085 AGTAACCTTCGTAGGAG 1101
> AT1G01520.1 | Symbols: | Homeodomain-like superfamily protein
| chr1:190596-192139 FORWARD LENGTH=864
Length=864
Score = 523 bits (283), Expect = 4e-147
Identities = 329/351 (94%), Gaps = 3/351 (1%)
Strand=Plus/Plus
Query 2998 ATGGTGACTGTAAACCCTAGCCAAGCTCATTGTTTACCCATGAGTATGAATCTACCGGGT 3057
||||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||
Sbjct 1 ATGGTGACTGTAAACCCTAGCCAAGCTCATTGTTTGCCTATGAAAATGAGTCTACCGGGT 60
Query 3058 TACAATACTCTTGCCCACACGGCAACAACGATGCCGGTTTCCATACGGAGCAAT---ACG 3114
| |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 61 TTCAATACTCTTCCCCACACGGCAACAACGATACCGGTTTCCATACGGAGCAATAGGACG 120
Query 3115 ATGTCGTTTTTTGAGGATCCAACAAAGAAGATTAGGAAGCCTTACACTATCACCAAGTCT 3174
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||
Sbjct 121 ATGTCGTTTTTTGAGGATCCAACAAAGAAGGTTAGAAAGCCTTACACTATCACCAAATCT 180
Query 3175 AGAGAGAACTGGACGGAGCAAGAACACGACAAGTTTCTTGAAGCTCTTCATTTATTTGAC 3234
||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct 181 AGAGAGAACTGGACGGAGCAAGAACACGACAAGTTCCTTGAAGCCCTTCATCTATTTGAC 240
Query 3235 CGGGATTGGAAGAAAATCGAGGCCTTCGTTGGATCAAAAACAGTGATACAGATACGTAGC 3294
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||
Sbjct 241 CGGGATTGGAAGAAAATAAAGGCCTTTGTTGGATCAAAAACAGTGATACAGATACGAAGC 300
Query 3295 CACGCACAGAAATACTTTCTCAAAGTTCAGAAGAATGGGACTAAAGAACAT 3345
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 301 CACGCACAGAAGTACTTTCTCAAAGTTCAGAAGAATGGGACTAAAGAACAT 351
Score = 507 bits (274), Expect = 4e-142
Identities = 346/380 (91%), Gaps = 8/380 (2%)
Strand=Plus/Plus
Query 3370 CCCTGTAAGCATGGATTAGTGCGTAGCGATGTTAATATACCAACTACTGTGATCAAAGAG 3429
||| |||||||||||||||||| | ||||||||| |||||||| | |||| |||||||||
Sbjct 491 CCC-GTAAGCATGGATTAGTGCATTGCGATGTTAGTATACCAAGTTCTGTTATCAAAGAG 549
Query 3430 GAATTGGGTGGT-TCAGAGAACTGTTGCAGCagtagtagtagtagtagAGATAAGCAGAG 3488
||||| ||| || |||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 550 GAATTTGGT-GTCTCAGAGAACTGTTGCAGC---ACTAGTAGTAGTAGAGATAAGCAGAG 605
Query 3489 GATTCA-AACCGTTACAGAGACAAATGACCAAGAAAGTTGTGGAAAGCCACATAGAGTGA 3547
|| | | || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 GACT-AGAATCGTTACAGAGACAAATGACCAAGAAAGTTGTGGAAAGCCACATAGAGTGG 664
Query 3548 CGCCGAATTTCGCTGAAGTTTACAGCTTCATAGGAAGTGTATTTGATCCAAAAACAACAG 3607
|||| ||||||||||||||||||| || ||||||||||| |||||||| ||||||||||
Sbjct 665 CGCCAAATTTCGCTGAAGTTTACAATTTTATAGGAAGTGTGTTTGATCCTAAAACAACAG 724
Query 3608 GTCATGTCCAGAGATTAAAGGAAATGGATCCAATAAATCTAGAAACGGTCCTCTTACTGA 3667
|||||||| ||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct 725 GTCATGTCAAGAGATTAAAGGAAATGGATCCAATAAATCTTGAGACGGTTCTCTTACTGA 784
Query 3668 TGAGAAATTTGTCTGTAAACCTGACGAGTCCCGAGTTTGAAGAACAACGGAAGTTGATAT 3727
||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 785 TGAAAAATTTATCTGTAAACCTGACGAGTCCCGAGTTTGATGAACAACGGAAGTTGATAT 844
Query 3728 CATCATACAACGCCAGATAG 3747
|||| ||||||||||| |||
Sbjct 845 CATCTTACAACGCCAGTTAG 864
> AT4G01280.2 | Symbols: | Homeodomain-like superfamily protein
| chr4:535241-537322 FORWARD LENGTH=1427
Length=1427
Score = 252 bits (136), Expect = 2e-65
Identities = 210/246 (85%), Gaps = 4/246 (2%)
Strand=Plus/Plus
Query 3102 ACGGAGCAATACGATGTCGTTTTTTGAGGATCCAACAAAGAAGATTAGGAAGCCTTACAC 3161
||||| || |||| ||||||||| ||||||||| || | ||||||| ||||||| |||||
Sbjct 149 ACGGACCAGTACGGTGTCGTTTTCTGAGGATCCGACGACGAAGATTCGGAAGCCGTACAC 208
Query 3162 TATCACCAAGTCTAGAGAGAACTGGACGGAGCAAGAACACGACAAGTTTCTTGAAGCTCT 3221
|||| ||||| |||||||| ||||| || ||||| ||||| || ||||| ||||||||
Sbjct 209 AATCAAGAAGTCGAGAGAGAATTGGACAGATCAAGAGCACGATAAATTTCTAGAAGCTCT 268
Query 3222 TCATTTATTTGACCGGGATTGGAAGAAAATCGAGGCCTTCGTTGGATCAAAAACAGTGA- 3280
||| ||||| || |||||||||||||||| || ||||| ||||||||||||||||| |
Sbjct 269 TCACTTATTCGATAGGGATTGGAAGAAAATAGAAGCCTTTGTTGGATCAAAAACAGT-AG 327
Query 3281 TACAGATACGTAGCCACGCACAGAAATACTTTCTCAAAGTTCAGAAGAATGG-GACTAAA 3339
| |||||||| |||||||| |||||||||||||||||||||||||||| ||| | ||||
Sbjct 328 TTCAGATACGAAGCCACGCTCAGAAATACTTTCTCAAAGTTCAGAAGAGTGGTG-CTAAC 386
Query 3340 GAACAT 3345
||||||
Sbjct 387 GAACAT 392
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 186621027960
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5