BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg311315 Length=1620 Score E Sequences producing significant alignments: (Bits) Value AT1G01190.1 | Symbols: CYP78A8 | cytochrome P450, family 78, su... 2453 0.0 AT1G13710.1 | Symbols: CYP78A5, KLU | cytochrome P450, family 7... 75.0 2e-12 > AT1G01190.1 | Symbols: CYP78A8 | cytochrome P450, family 78, subfamily A, polypeptide 8 | chr1:83045-84864 REVERSE LENGTH=1608 Length=1608 Score = 2453 bits (1328), Expect = 0.0 Identities = 1512/1602 (94%), Gaps = 7/1602 (0%) Strand=Plus/Plus Query 16 ATGAGAACCGAAATAGAAAATTTGTGGGTATTTGCTCTTGCATCAAAATTCAATATTTTC 75 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 1 ATGAGAACCGAAATAGAAAGTTTGTGGGTATTTGCTCTTGCATCAAAATTCAATATTTAC 60 Query 76 ATGCAAGAACATTTTGCTTCCCTTCTTC-TCGCCATAGCTATCACTTGGTGTACCTTAAC 134 |||||| |||||||||||||||||| || ||||||| ||||||||||||| |||| |||| Sbjct 61 ATGCAACAACATTTTGCTTCCCTTC-TCGTCGCCATTGCTATCACTTGGTTTACCATAAC 119 Query 135 CATCGTATTTTGGTCTACTCCGGGTGGACCGGCTTGGGGAAAATACTTCTTCACTCGCCG 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 CATCGTATTTTGGTCTACTCCGGGTGGACCGGCTTGGGGAAAATACTTCTTCACTCGCCG 179 Query 195 GTTTAGTTCTCTCGGTCATAACCGAAAATCCAAGAATCTCATTCCCGGTCCTCGAGGGTT 254 ||||| |||||||| | | |||||||||| |||||||||||||||||||||| ||||||| Sbjct 180 GTTTATTTCTCTCGATTACAACCGAAAATACAAGAATCTCATTCCCGGTCCTAGAGGGTT 239 Query 255 TCCACTTGTTGGAAGCATGAGCCTCAGGTCAAGCCACGTGGCTCATCAGCGCATAGCGTC 314 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 240 TCCACTTGTGGGAAGCATGAGCCTTAGGTCAAGCCACGTGGCTCATCAGCGCATAGCGTC 299 Query 315 AGTGGCCGAGATGAGTAACGCCAAGCGGCTCATGGCGTTTAGCCTCGGCGATACTAAGGT 374 ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 300 TGTGGCTGAGATGAGTAACGCCAAGCGGCTCATGGCGTTTAGCCTCGGTGATACTAAGGT 359 Query 375 GGTGGTGACGTGTCATCCTGACGTGGCGAAAGAA-ATACTAAACAGTTCCGTTTTTGCAG 433 |||||||||||||||||||| |||||| |||| | |||||||||||||| |||||||| | Sbjct 360 GGTGGTGACGTGTCATCCTGCCGTGGC-AAAGGAGATACTAAACAGTTCGGTTTTTGCTG 418 Query 434 ACCGGCCGGTTGACGAAACCGCTTACGGTTTGATGTTTAATCGAGCCATGGGATTTGCTC 493 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 419 ACCGACCGGTTGACGAAACCGCTTACGGTTTGATGTTTAACCGAGCCATGGGATTTGCTC 478 Query 494 CCAATGGTACTTACTGGCGTACACTGCGTCGGTTAAGCTCGAACCATCTTTTCAACCCAA 553 ||||||||||||| |||||||| |||||||||||| |||||||||||||||| ||||| | Sbjct 479 CCAATGGTACTTATTGGCGTACGCTGCGTCGGTTAGGCTCGAACCATCTTTTTAACCCGA 538 Query 554 AGCAAATCAAACGCTCGGAGGAGCAGAGAAGAGTGATCGCGACTCAGATGGTTAATGCGT 613 |||||||||||| |||||||| |||||| | ||||| |||||||||||||| ||||||| Sbjct 539 AGCAAATCAAACAATCGGAGGATCAGAGACGGGTGATAGCGACTCAGATGGTGAATGCGT 598 Query 614 TTGCACGCAACGCTAAATCTGCGTTTGCAGTGCGTGATTTGCTCAAAACAGCGTCGTTGT 673 ||||||| ||| ||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 599 TTGCACGTAACCCTAAATCCGCGTGTGCAGTGCGTGATTTGCTCAAAACAGCGTCGTTGT 658 Query 674 GTAACATGATGGGATCGGTTTTTGGGAGAGAATATGAATTGGAGTCAAATAACAACGTGG 733 ||||||||||||| | |||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 659 GTAACATGATGGGTTTGGTTTTCGGGAGAGAGTATGAATTGGAGTCAAATAACAACTTGG 718 Query 734 AATCGGAATGCTTAAAGGGTTTGGTTGAAGAAGGGTACGATCTTCTCGGTACGTTAAATT 793 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 719 AATCTGAATGCTTAAAGGGTTTGGTTGAAGAAGGGTACGATCTTCTAGGTACGTTAAATT 778 Query 794 GGACCGACCATCTCCCTTGGTTAGCCGGTTTAGATTTCCAACAAATCCGGTTTAGGTGCT 853 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 779 GGACCGACCATCTTCCTTGGTTAGCCGGTTTAGATTTCCAACAAATCCGGTTTAGGTGCT 838 Query 854 CCCAGCTCGTACCGAAAGTAAATCTGTTACTGAGCCGTATCATTCATGAACA-C-TA-TG 910 | ||||||||||||||||||||||||||| ||||||||||||| |||||||| | | || Sbjct 839 CGCAGCTCGTACCGAAAGTAAATCTGTTATTGAGCCGTATCATACATGAACAACGTGCTG 898 Query 911 CCACCGGTAACTTTCTTGACGTGCTACTTTCACTTCAACGTTCAGAAAAATTATCAGATT 970 |||| ||||||||||||||| || ||||||| |||||| ||||||||||||||||||| | Sbjct 899 CCACGGGTAACTTTCTTGACATGTTACTTTCTCTTCAAGGTTCAGAAAAATTATCAGAAT 958 Query 971 CAGACATAGTTGCTGTTCTTTGGGAAATGATATTTAGGGGAACGGACACTGTTGCGGTTT 1030 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 959 CCGACATGGTTGCTGTTCTTTGGGAAATGATATTTAGGGGAACGGACACTGTTGCGGTTT 1018 Query 1031 TGATCGAGTGGGTCCTAGCGAGGATTGTGATGCATCCTAAAGTTCAATCAACGGTCCACG 1090 || |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 1019 TGGTCGAGTGGGTGCTAGCGAGGATTGTGATGCATCCCAAAGTTCAATTAACGGTCCACG 1078 Query 1091 ATGAGCTTGACCGAGTCGTTGGCAGATCAAGAACCGTCGATGAGTCAGACCTTCCATCGC 1150 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 1079 ATGAGCTTGACCGAGTCGTTGGCAGATCAAGAACCGTGGATGAGTCAGACCTTCCATCAC 1138 Query 1151 TCACGTATCTAACGGCTATGATCAAAGAAGTGTTGAGGCTGCATCCACCAGGCCCACTTC 1210 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1139 TCACGTATCTAACGGCTATGATCAAAGAAGTGTTGAGGCTGCATCCACCAGGTCCACTGC 1198 Query 1211 TTTCTTGGGCACGCCTCTCTATAACAGACACCACCGTAGACGGATATCACGTGCCGGCTG 1270 ||||||||||||| || |||||||||||||| ||||||| ||||||||||||||||||| Sbjct 1199 TTTCTTGGGCACGACTGTCTATAACAGACACTTCCGTAGATGGATATCACGTGCCGGCTG 1258 Query 1271 GGACCACCGCGATGGTCAACATGTGGGCTATAGCACGTGACCCGCACGTGTGGGAGGATC 1330 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1259 GGACCACCGCGATGGTCAACATGTGGGCTATAGCACGTGACCCACACGTGTGGGAGGATC 1318 Query 1331 CTTTAGAGTTTAAGCCTGAGAGGTTCGTGGCTAAAGATGGTGAAGCTGAGTTCTCTGTTT 1390 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1319 CTTTAGAGTTTAAGCCTGAGAGGTTCGTGGCTAAAGAGGGTGAAGCTGAGTTCTCTGTTT 1378 Query 1391 TCGGGTCGGATCTGAGGTTGGCACCGTTCGGGTCCGGTAAGAGGGTTTGCCCTGGAAAGA 1450 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1379 TCGGGTCGGATCTGAGGTTGGCACCGTTCGGGTCGGGTAAGAGGGTTTGCCCTGGAAAGA 1438 Query 1451 ATTTGGGGCTTACGACGGTGTCGTTTTGGGTTGCAACGCTCTTGCATGAGTTTGAGTGGC 1510 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 ATTTGGGACTTACAACGGTGTCGTTTTGGGTTGCAACGCTCTTGCATGAGTTTGAGTGGC 1498 Query 1511 TTCCAAGCGTCGAAGCAAACCCTCCAGATCTCTCGGAGGTTTTGAGGCTCTCGTGCGAGA 1570 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1499 TTCCTAGCGTCGAAGCTAACCCTCCAGATCTCTCGGAGGTTTTGAGGCTCTCGTGTGAGA 1558 Query 1571 TGGCTTGTCCTCTTATCGTTAACGTAAGCCCAAGGCGTAAGA 1612 |||||||||| || ||||||||||||||| |||||||||||| Sbjct 1559 TGGCTTGTCCACTCATCGTTAACGTAAGCTCAAGGCGTAAGA 1600 > AT1G13710.1 | Symbols: CYP78A5, KLU | cytochrome P450, family 78, subfamily A, polypeptide 5 | chr1:4702725-4704657 REVERSE LENGTH=1826 Length=1826 Score = 75.0 bits (40), Expect = 2e-12 Identities = 91/115 (79%), Gaps = 6/115 (5%) Strand=Plus/Plus Query 955 GAAAAATTATCAGATTCAGACATAG-TTGCTGTTCTTTGGGAAATGATATTTAG-GGGAA 1012 ||||| || || ||||| ||||| | |||||||||||||||||||||||||||| |||| Sbjct 966 GAAAAGTTGTCTGATTCTGACAT-GATTGCTGTTCTTTGGGAAATGATATTTAGAGGGA- 1023 Query 1013 CGGACACTGTTGCGGTTTT-GATCGAGTGGGTCCTAGCGAGGATTGTGATGCATC 1066 | || || |||||| || | | | || ||||| || || || || || |||||| Sbjct 1024 CAGATACAGTTGCGATTCTAG-TGGAATGGGTGCTTGCAAGAATGGTTTTGCATC 1077 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80019668730 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5