BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg312568 Length=927 Score E Sequences producing significant alignments: (Bits) Value AT1G15800.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 507 1e-142 > AT1G15800.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5441082-5443684 REVERSE LENGTH=1067 Length=1067 Score = 507 bits (274), Expect = 1e-142 Identities = 324/346 (94%), Gaps = 11/346 (3%) Strand=Plus/Plus Query 1 ATGACCGGCGGAGACTGGATTCACGAGGCTATGGGTGATGATTCATTGGTGGCGGAGGCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 101 ATGACCGGCGGAGACTGGATTCACGAGGCTATGGGTGATGATTCATTAGTGGCGGAGGCT 160 Query 61 CTGATCTGTCTCCTCCATGCTGAACCGTCACCTCCTGAGACGAAGAGCGGCGGCGCGTCG 120 |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||| Sbjct 161 CTGATCTGTCTCCTCCATGCCGAGCCGTCACTTCCTGAGACGAAGAGCGGCGGCGCGTCG 220 Query 121 GATCTCAAGCTGAAGTGGAGCGTGCGTCAGCGGAGGACCAAGGCGGC-ACCGTTAAGGAA 179 ||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||| Sbjct 221 GATCTCAAGCTGAAGTGGAGCGTGCGTCAGCCGAGGACCAAGGCGGCGAC-GTTAAGGAA 279 Query 180 GAAGGGAGATCATGATACGCGTGCTAGTCCCACGACGCCTCTTTCCTGGAGCGGCGCAAC 239 |||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct 280 GAAGGGAGATCATGATACGCGTGCTAGTCCCACGACCCCACTTTCATGGAGCGGCGCAAC 339 Query 240 CTCTTTTAGCGGCGGTGGAGGCGGAGGTAGCGGTGCTGCTGTTGCCGTTGATGGATTTGA 299 |||||||||||||||||||||||| | || |||||||| |||||||||||||||| Sbjct 340 CTCTTTTAGCGGCGGTGGAGGCGG---T-GC--TGCTGCTG---CCGTTGATGGATTTGA 390 Query 300 GGAGTCAAGCGGCGCCGTGAAACTGTCTGAGGCCGTTAGATCTAAG 345 ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct 391 GGAGTCAAGTGGCGTTGTGAAACTGTCTGAGGCCGTTAGATCTAAG 436 Score = 446 bits (241), Expect = 2e-124 Identities = 274/290 (94%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 639 GATATCTCAAACGAGTGTAACAACAAGCCCTTTCAAGAGATCAAGAAAGAAAAAGACACT 698 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 436 GATAACTCAAACGAGTGTTACAACAAGCCCTTTCAAGAGATCAAGAAAGAAAAAGACACT 495 Query 699 TGCTCAACTTAAAGAGGAGGAGAGTTTGCTCTTAAATGAAAGGAAAAGCTTGAAAAATGA 758 ||||||||||||||||||||||||| |||||||||| |||||||| |||||| |||||| Sbjct 496 TGCTCAACTTAAAGAGGAGGAGAGTGTGCTCTTAAAGGAAAGGAATGGCTTGAGAAATGA 555 Query 759 ACTCGCAACTATGCAAGATCTGGTCAAGCAACAAAGAGCAAGAAACGAGTCTTTAAAGAA 818 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 556 ACTCGCAACTATGCAGGATCTGCTCAAGCAACAAAGAGCAAGAAACGAGTCTTTAAAGAA 615 Query 819 TA-TCCAGGCTGAATCACAAAAGAATGATGATTCTTCCTTCTTGCTCCCTGACCTTAACA 877 | |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct 616 -ACTCCAGGCTGAGTCACAAAAGAATGATGATTCCTCCTTCTTGCTCCCTGACCTTAATA 674 Query 878 TACCTCTGGATAACAACCCGAGCCCTGAAAGTCTCTATGGAACCAGCTGA 927 || |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 675 TAGCTCTGGATAACAACTCGAGCCCTGAAAGTCTCTATGGAACCAGCTGA 724 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45311200594 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5