BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312617
Length=1614
Score E
Sequences producing significant alignments: (Bits) Value
AT1G16400.1 | Symbols: CYP79F2 | cytochrome P450, family 79, su... 2444 0.0
AT1G16410.1 | Symbols: CYP79F1, BUS1, SPS1 | cytochrome p450 79... 2228 0.0
> AT1G16400.1 | Symbols: CYP79F2 | cytochrome P450, family 79,
subfamily F, polypeptide 2 | chr1:5605159-5607473 FORWARD LENGTH=1878
Length=1878
Score = 2444 bits (1323), Expect = 0.0
Identities = 1524/1621 (94%), Gaps = 14/1621 (1%)
Strand=Plus/Plus
Query 1 ATGATGATGATGATGAGCTTTAACACAT-CATTTCAAATCATACTAGTCTTTATCCTCTT 59
|||||||||| ||| ||||||||||||| | ||||||||| |||||| |||||| ||||
Sbjct 73 ATGATGATGAAGATTAGCTTTAACACATGC-TTTCAAATCTTACTAGGATTTATCGTCTT 131
Query 60 CATCGCATCAATCACTTTACTAGGTCGAATACTCTCAAGGCCCTCCAAAA-CAAGAGACC 118
||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||
Sbjct 132 CATCGCATCAATCACTTTACTAGGTCGAATATTCTCAAGGCCTTCCAAAACCAA-AGACC 190
Query 119 GATCTCGCCAGCTTCCTCCTGGGCC-ACCAGGATGGCTCATCCTCGGCAATCTACCCGAA 177
| | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||
Sbjct 191 GGTGTCGCCAGCTTCCTCCT-GGCCGACCAGGATGGCCCATCCTCGGCAATCTACCCGAA 249
Query 178 CTAATCATGACTCGTCCTAGGTCGAAATATTTCCACCTTGCCATGAAAGAGCTAAAAACA 237
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 250 CTAATCATGACTCGTCCTAGGTCCAAATATTTCCACCTTGCCATGAAAGAGCTAAAAACG 309
Query 238 GATATTGCATGTTTCAATTTTGCCGGAACCCACACCATCACCATAACCTCCGACGAGATC 297
||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 310 GATATCGCATGTTTCAACTTTGCCGGAACCCACACCATCACCATAAACTCCGACGAGATC 369
Query 298 ACTAAAGAAGCGTTTAGAGAGAGAGACGCCGATTTGGCAGACCGGCCTCAACTTTCCAGC 357
||| |||||| ||||||||| ||||||| |||||||||||||||||||||||||||| |
Sbjct 370 GCTAGAGAAGCTTTTAGAGAGCGAGACGCAGATTTGGCAGACCGGCCTCAACTTTCCATC 429
Query 358 ATAGAGTCCATTGGAGACAATTACAAATCAATGGGAACCTCCCCGTACGGTGAACAATTC 417
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||
Sbjct 430 GTAGAGTCCATTGGAGACAATTACAAAACAATGGGAACCTCATCGTACGGTGAACATTTC 489
Query 418 ATGAAGATGAAAAAAGTGATTACAACGGAAATTATGTCCGTTAAAACGTTGAACATGTTG 477
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 490 ATGAAGATGAAAAAAGTGATCACAACGGAAATTATGTCCGTTAAAACGTTGAATATGTTG 549
Query 478 GAAGCTGCAAGAACCATCGAAGCTGATAATTTCATTGCTTACATTCACTCGATGTATCAA 537
|||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 550 GAAGCTGCGAGAACCATCGAAGCGGATAATCTCATTGCTTACATTCACTCGATGTATCAA 609
Query 538 CGGTCGGAGACGGTCGACGTTAGAGAGCTCTCGAGGGTTTATGGTTACGCAGTGACCATG 597
|||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 610 CGGTCGGAGACGGTCGACGTTAGAGAACTTTCGAGAGTTTATGGTTACGCAGTGACCATG 669
Query 598 AGGATGTTGTTTGGAAGGAGACATGTCACGAAAGAAAACGTGTTTTCGGATGATGGGAGA 657
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 670 AGAATGTTGTTTGGAAGGAGACATGTCACGAAAGAAAACATGTTTTCGGATGATGGGAGA 729
Query 658 CTAGGAAAAGCAGAAAAACATCATCTTGAGGTGATTTTCAACACTCTAAACTGTTTGCCA 717
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 CTAGGAAAAGCCGAAAAACATCATCTTGAGGTGATTTTCAACACTCTAAACTGTTTGCCA 789
Query 718 AGTTTTAGTCCCGTGGATTACGTGGAAAGATGGTTGA-GAGGTTGGAATATTGATGGTCA 776
||||||||||||||||||||||||| ||||||| | | |||||||||||||||||| |
Sbjct 790 GGTTTTAGTCCCGTGGATTACGTGGACCGATGGTT-AGGTGGTTGGAATATTGATGGTGA 848
Query 777 AGAGGAGATG-GCGAAAGTGAATGTTAATCTTGTTCGTAGTTACAACAATCCCATAATCG 835
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 849 AGAGGAGA-GAGCGAAAGTGAATGTTAATCTTGTTCGTAGTTACAACAATCCCATAATAG 907
Query 836 ACGAGAGGATTG-AATTATGGAGGGAAAAAGGTGGTAAGGCTGCTGTTGAAGATTGGCTT 894
|||||||| | | |||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 908 ACGAGAGGGTCGAAATT-TGGAGGGAAAAAGGTGGTAAGGCTGCTGTGGAAGATTGGCTT 966
Query 895 GATACGTTCATTACGTTAAAAGATCAAAACGGAAACTACTTGGTCACGCCAGACGAAATC 954
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 967 GATACGTTCATTACGCTAAAAGATCAAAACGGAAACTACTTGGTTACGCCAGACGAAATC 1026
Query 955 AAAGCTCAATGCGTTGAATTTTGTATAGCAACGATCGATAATCCGGCAAATAACATGGAG 1014
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1027 AAAGCTCAATGCGTCGAATTTTGTATAGCAGCGATCGATAATCCGGCAAATAACATGGAG 1086
Query 1015 TGGACACTTGCGGAAATGTTAAAGAACCCGGAGATTCTCAGAAAAGCTCTGAAAGAGTTA 1074
|||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1087 TGGACACTTGGGGAAATGTTAAAGAACCCGGAGATTCTTAGAAAAGCTCTGAAGGAGTTG 1146
Query 1075 GAGGAAGTAGTTGGAAAAGACAGGCTTGTGCAAGAATCTGACATACCAAATCTAAACTAC 1134
|| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct 1147 GATGAAGTAGTTGGAAAAGACAGGCTTGTGCAAGAATCAGACATACGAAATCTAAACTAC 1206
Query 1135 TTAAAAGCTTGTTGCAGAGAAACATTCAGGATTCACCCAAGCGCTCATTATGTCCCTCCT 1194
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1207 TTAAAAGCTTGTTGCAGAGAAACATTCAGGATTCACCCAAGCGCTCATTATGTCCCACCT 1266
Query 1195 CATGTGGCCCGTCAAGATACCACCCTCGGGGGTTATTTTATTCCCAAAGGTAGCCACATT 1254
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1267 CATGTTGCCCGTCAAGATACCACCCTTGGGGGTTATTTTATTCCCAAAGGTAGCCACATT 1326
Query 1255 CATGTATCCCGCCCTGGATTAGGCCGGAACCCTAAAATATGGAAAGATCCATTGGTATAT 1314
||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||
Sbjct 1327 CATGTATGCCGCCCTGGGCTAGGCCGGAACCCTAAAATATGGAAAGATCCATTAGCATAC 1386
Query 1315 GAACCGGAGCGTCACCTCCAAGGAGAGGGAATCACAAAAGAGGTTACTCTGGTGGAAACA 1374
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 1387 GAACCGGAGCGTCACCTCCAAGGAGACGGAATCACAAAAGAGGTTACTCTGGTCGAAACA 1446
Query 1375 GAGATGCGTTTTGTCTCGTTTAGCACTGGTCGTCGTGGCTGCGTCGGTGTCAAAGTCGGG 1434
||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||
Sbjct 1447 GAGATGCGTTTTGTCTCATTTAGCACTGGTAGACGTGGCTGCGTCGGTGTCAAAGTCGGG 1506
Query 1435 ACAATTATGATGGTTATGATGTTGGCTAGGTTTCTTCAAGGGTTTAACTGGAAACTCTAC 1494
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1507 ACAATTATGATGGCTATGATGTTGGCTAGGTTTCTTCAAGGTTTTAACTGGAAACTCCAT 1566
Query 1495 CAAGGTTGT-GGACCGCTAAGCCTCGAGGAAGATGATGCATCATTGCTGATGGCTAAGCC 1553
| || || | |||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1567 CGAGATT-TCGGACCGTTAAGCCTCGAGGAAGATGATGCATCATTGCTTATGGCTAAGCC 1625
Query 1554 TCTTCTTTTGTCCGTTGAGCCACGCTTGGCACCAAACCTTTATCCAAAATTCCGCCCTTA 1613
|||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1626 TCTTCTTTTGTCTGTTGAGCCACGCTTGGCATCAAACCTTTATCCAAAATTCCGTCCTTA 1685
Query 1614 A 1614
|
Sbjct 1686 A 1686
> AT1G16410.1 | Symbols: CYP79F1, BUS1, SPS1 | cytochrome p450
79f1 | chr1:5608807-5611426 FORWARD LENGTH=1980
Length=1980
Score = 2228 bits (1206), Expect = 0.0
Identities = 1462/1588 (92%), Gaps = 8/1588 (1%)
Strand=Plus/Plus
Query 31 TTTCAAATCATACTAGTCTTTATCCTCTTCATCGCATCAATCACTTTACTAGGTCGAATA 90
||||| ||| |||||||||||||||||| ||| |||||||||||| |||| |||||||||
Sbjct 89 TTTCACATCCTACTAGTCTTTATCCTCTCCATGGCATCAATCACTCTACTGGGTCGAATA 148
Query 91 CTCTCAAGGCCCTCCAAAA-CAAGAGACCGATCTCGCCAGCTTCCTCCTGGGCCACCAGG 149
|||||||||||| |||||| ||| |||||||||| |||||||||||||||| ||||||||
Sbjct 149 CTCTCAAGGCCCACCAAAACCAA-AGACCGATCTTGCCAGCTTCCTCCTGGCCCACCAGG 207
Query 150 ATGGCTCATCCTCGGCAATCTACCCGAACTAATCATGACTCGTCCTAGGTCGAAATATTT 209
||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 208 ATGGCCCATCCTCGGCAATCTACCCGAACTATTCATGACTCGTCCTAGGTCCAAATATTT 267
Query 210 CCACCTTGCCATGAAAGAGCTAAAAACAGATATTGCATGTTTCAATTTTGCCGGAACCCA 269
|| |||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||
Sbjct 268 CCGCCTTGCCATGAAAGAGCTAAAAACAGATATAGCATGTTTCAACTTTGCCGGCATCCG 327
Query 270 CACCATCACCATAACCTCCGACGAGATCACTAAAGAAGCGTTTAGAGAGAGAGACGCCGA 329
|||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||| ||
Sbjct 328 TGCCATCACCATAAACTCCGACGAGATCGCTAGAGAAGCGTTTAGAGAGCGAGACGCAGA 387
Query 330 TTTGGCAGACCGGCCTCAACTTTCCAGCATAGAGTCCATTGGAGACAATTACAAATCAAT 389
||||||||||||||||||||||| || ||| ||| | || ||||||||||||||||||||
Sbjct 388 TTTGGCAGACCGGCCTCAACTTTTCATCATGGAGACAATCGGAGACAATTACAAATCAAT 447
Query 390 GGGAACCTCCCCGTACGGTGAACAATTCATGAAGATGAAAAAAGTGATTACAACGGAAAT 449
||||| || ||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 448 GGGAATTTCACCGTACGGTGAACAATTCATGAAGATGAAAAGAGTGATCACAACGGAAAT 507
Query 450 TATGTCCGTTAAAACGTTGAACATGTTGGAAGCTGCAAGAACCATCGAAGCTGATAATTT 509
|||||||||||| |||||||| |||||||| |||||||||||||||||||| |||||| |
Sbjct 508 TATGTCCGTTAAGACGTTGAAAATGTTGGAGGCTGCAAGAACCATCGAAGCGGATAATCT 567
Query 510 CATTGCTTACATTCACTCGATGTATCAACGGTCGGAGACGGTCGACGTTAGAGAGCTCTC 569
||| |||||| ||||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct 568 CATAGCTTACGTTCACTCCATGTATCAACGGTCCGAGACGGTCGATGTTAGAGAGCTCTC 627
Query 570 GAGGGTTTATGGTTACGCAGTGACCATGAGGATGTTGTTTGGAAGGAGACATGTCACGAA 629
|||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||
Sbjct 628 GAGGGTTTATGGTTACGCAGTGACCATGCGAATGTTGTTTGGAAGGAGACATGTTACGAA 687
Query 630 AGAAAACGTGTTTTCGGATGATGGGAGACTAGGAAAAGCAGAAAAACATCATCTTGAGGT 689
||||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||
Sbjct 688 AGAAAACGTGTTTTCTGATGATGGAAGACTAGGAAACGCCGAAAAACATCATCTTGAGGT 747
Query 690 GATTTTCAACACTCTAAACTGTTTGCCAAGTTTTAGTCCCGTGGATTACGTGGAAAGATG 749
||||||||||||||| |||||||| || ||||||||||| | ||||||||||||| ||||
Sbjct 748 GATTTTCAACACTCTTAACTGTTTACCGAGTTTTAGTCCAGCGGATTACGTGGAACGATG 807
Query 750 GTTGAGAGGTTGGAATATTGATGGTCAAGAGGAGATGGCGAAAGTGAA-TGTTAATC-TT 807
|||||||||||||||| |||||||||||||| ||| || || || ||| || ||| | ||
Sbjct 808 GTTGAGAGGTTGGAATGTTGATGGTCAAGAGAAGAGGGTGACAGAGAACTG-TAA-CATT 865
Query 808 GTTCGTAGTTACAACAATCCCATAATCGACGAGAGGATTGAATTATGGAGGGAAAAAGGT 867
|||||||||||||||||||||||||||||||||||| | | || ||||||||| |||||
Sbjct 866 GTTCGTAGTTACAACAATCCCATAATCGACGAGAGGGTCCAGTTGTGGAGGGAAGAAGGT 925
Query 868 GGTAAGGCTGCTGTTGAAGATTGGCTTGATACGTTCATTACGTTAAAAGATCAAAACGGA 927
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 926 GGTAAGGCTGCTGTTGAAGATTGGCTTGATACGTTCATTACCCTAAAAGATCAAAACGGA 985
Query 928 AACTACTTGGTCACGCCAGACGAAATCAAAGCTCAATGCGTTGAATTTTGTATAGCAACG 987
|| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 986 AAGTACTTGGTCACACCAGACGAAATCAAAGCTCAATGCGTAGAATTTTGTATAGCAGCG 1045
Query 988 ATCGATAATCCGGCAAATAACATGGAGTGGACACTTGCGGAAATGTTAAAGAACCCGGAG 1047
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1046 ATTGATAATCCGGCAAATAACATGGAGTGGACACTTGGGGAAATGTTAAAGAACCCGGAG 1105
Query 1048 ATTCTCAGAAAAGCTCTGAAAGAGTTAGAGGAAGTAGTTGGAAAAGACAGGCTTGTGCAA 1107
||||| |||||||||||||| ||||| || ||||||||||||| ||||||||||||||||
Sbjct 1106 ATTCTTAGAAAAGCTCTGAAGGAGTTGGATGAAGTAGTTGGAAGAGACAGGCTTGTGCAA 1165
Query 1108 GAATCTGACATACCAAATCTAAACTACTTAAAAGCTTGTTGCAGAGAAACATTCAGGATT 1167
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1166 GAATCAGACATACCAAATCTAAACTACTTAAAAGCTTGTTGTAGAGAAACATTCAGAATT 1225
Query 1168 CACCCAAGCGCTCATTATGTCCC-TCCTCATGTGGCCCGTCAAGATACCACCCTCGGGGG 1226
|||||||| |||||||||||||| ||| ||| | || ||||||||||||||||| |||||
Sbjct 1226 CACCCAAGTGCTCATTATGTCCCTTCC-CATCTTGCGCGTCAAGATACCACCCTTGGGGG 1284
Query 1227 TTATTTTATTCCCAAAGGTAGCCACATTCATGTATCCCGCCCTGGATTAGGCCGGAACCC 1286
|||||| |||||||||||||||||||||||||||| |||||||||| |||| || |||||
Sbjct 1285 TTATTTCATTCCCAAAGGTAGCCACATTCATGTATGCCGCCCTGGACTAGGTCGTAACCC 1344
Query 1287 TAAAATATGGAAAGATCCATTGGTATATGAACCGGAGCGTCACCTCCAAGGAGAGGGAAT 1346
||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 1345 TAAAATATGGAAAGATCCATTGGTATACAAACCGGAGCGTCACCTCCAAGGAGACGGAAT 1404
Query 1347 CACAAAAGAGGTTACTCTGGTGGAAACAGAGATGCGTTTTGTCTCGTTTAGCACTGGTCG 1406
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1405 CACAAAAGAGGTTACTCTGGTGGAAACAGAGATGCGTTTTGTCTCGTTTAGCACCGGTCG 1464
Query 1407 TCGTGGCTGCGTCGGTGTCAAAGTCGGGACAATTATGATGGTTATGATGTTGGCTAGGTT 1466
||||||||| ||||||| ||||||||||| || |||||||||||| |||||||||||||
Sbjct 1465 ACGTGGCTGCATCGGTGTTAAAGTCGGGACGATCATGATGGTTATGTTGTTGGCTAGGTT 1524
Query 1467 TCTTCAAGGGTTTAACTGGAAACTCTACCAAGGTTGTGGACCGCTAAGCCTCGAGGAAGA 1526
||||||||||||||||||||||||| | |||| || ||||||| ||||||||||||||||
Sbjct 1525 TCTTCAAGGGTTTAACTGGAAACTCCATCAAGATTTTGGACCGTTAAGCCTCGAGGAAGA 1584
Query 1527 TGATGCATCATTGCTGATGGCTAAGCCTCTTCTTTTGTCCGTTGAGCCACGCTTGGCACC 1586
||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 1585 TGATGCATCATTGCTTATGGCTAAACCTCTTCACTTGTCCGTTGAGCCACGCTTGGCACC 1644
Query 1587 AAACCTTTATCCAAAATTCCGCCCTTAA 1614
||||||||||||||| ||||| ||||||
Sbjct 1645 AAACCTTTATCCAAAGTTCCGTCCTTAA 1672
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79718465460
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5