BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg313311 Length=1197 Score E Sequences producing significant alignments: (Bits) Value AT1G26790.1 | Symbols: | Dof-type zinc finger DNA-binding fami... 1807 0.0 > AT1G26790.1 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr1:9273857-9275312 REVERSE LENGTH=1191 Length=1191 Score = 1807 bits (978), Expect = 0.0 Identities = 1133/1205 (94%), Gaps = 22/1205 (2%) Strand=Plus/Plus Query 1 ATGTGGCTCTCTCATCTCTTCATGTCCCTCTCTCAGCTGACGTGTAATTTCTCCATTTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1 ATGTGGCTCTCTCATCTCTTCATGTCCCTCTCTAAGCTGACGTGTAATTTCTCCATTTTC 60 Query 61 TCTGTCTTTATGGCTTGTGGCTCTATTATTGGTATGTCTCAAGTTAGAGATACTCCGGTT 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 61 TCTGTCTTTATGGCTTGTGGCTC---TATTGGTATGTCTCAAGTTAGAGATACTCCGGTT 117 Query 121 AAGTTGTTTGGCTGGACAATTACACCGGTTTCTCATGATCCACACtcttcttcgt-ccac 179 || ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 118 AAATTGTTTGGCTGGACAATTACACCGGTTTCTCATGATCCATACTCTTCTTCGTCCCA- 176 Query 180 tgttcttcctgattcttcctcgtcttcctcatcttcttctccatcacttcGACCACACAT 239 |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 177 TGTTCTTCCTGATTCTTCCTCGTCTTCCTCGTCTTCTTCTCTATCACTTCGACCACACAT 236 Query 240 GATGAATAACCAATCTGCTACTAACAATACAAGTCTTAAGATGTCATCTAATCTTAACAA 299 ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| Sbjct 237 GATGAATAACCAATCTGTTACTGACAATACAAGTCTTAAGCTGTCATCTAATCTTAACAA 296 Query 300 TGAGTCGAAAGAAACATCTGAGAACAGCGATGACCAACACAGCGAGATTACAACAATTAC 359 ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 297 CGAGTCAAAAGAAACATCTGAGAACAGTGATGACCAACACAGCGAGATCACAACAATTAC 356 Query 360 ATC-G--GAAGAGAAAACAACTGAACTGAAGAAACCAGACAAGATTCTTCCGTGTCCGAG 416 ||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 357 ATCGGAAGAAGAGAAAACAACTGAACTGAAGAAACCAGACAAGATTCTTCCATGTCCGAG 416 Query 417 ATGCAACAGCGCAGACACCAAATTCTGTTACTACAACAACTACAACGTTAACCAGCCACG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 417 ATGCAACAGCGCAGACACCAAATTCTGTTACTACAACAACTACAACGTTAACCAGCCACG 476 Query 477 TCACTTCTGTAGAAAATGCCAGAGGTATTGGACTGCTGGTGGATCCATGAGGACCGTCCC 536 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 477 TCACTTCTGTAGAAAATGCCAGAGGTATTGGACCGCTGGTGGATCCATGAGGATCGTCCC 536 Query 537 AGTAGGCTCAGGCCGTCGCAAGAACAAGGGATGGGTTTCTTCAGACCAGTACCTGCACAT 596 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 GGTTGGCTCAGGCCGTCGCAAGAACAAGGGATGGGTTTCTTCAGACCAGTACCTGCACAT 596 Query 597 CACTTCCGAGGATACTGACAATTACAATAGCTCCTCAACGAAGATTCTAAGCTTCGAGTC 656 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 597 CACTTCCGAGGATACTGACAATTACAATAGCTCCTCAACAAAGATTCTAAGCTTCGAGTC 656 Query 657 TTCGAACTCTTTGCTTACTGAGAA-CACTAAGCATCAATCAAGC-AATGTGAAGAAAAAC 714 |||| |||||||| | ||||||| | ||||||||||||||| | || ||||||| |||| Sbjct 657 TTCGGACTCTTTGGTAACTGAGAGGC-CTAAGCATCAATCAAACGAA-GTGAAGATAAAC 714 Query 715 GGC-GATTCTGTTTCACAAGAACTCAACAACTTCCAAGGGTTTCTTCCTCCGCAAGGATA 773 | | || ||||||||||||||| |||||||||||||||||| |||||||| |||| || Sbjct 715 G-CTGAACCTGTTTCACAAGAACCCAACAACTTCCAAGGGTTACTTCCTCCCCAAGCATC 773 Query 774 CCCTGTTTCGCCCCCTTGGCCTTGCCAATACCCTCCAAACCCTAGTTTCTACCACATGCC 833 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 774 CCCTGTTTCGCCTCCTTGGCCTTACCAATACCCTCCAAACCCTAGTTTCTACCACATGCC 833 Query 834 CGTCTACTGGGGCTGTGCGGTACCGGTTTGGTCTACCCTAGGCACTTCTACATGTCTTGG 893 ||||||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||| Sbjct 834 CGTCTACTGGGGCTGCGCGATACCGGTTTGGTCTACCCTCGACACTTCTACATGTCTTGG 893 Query 894 GAAAAGGACAAGAGACGAAGCTGAAGCTTCGCATGAAACTGTTAAAGAGAGCAAAAATGC 953 ||||||||||||||||||| | |||| |||||||||||||||||||| |||||||| Sbjct 894 GAAAAGGACAAGAGACGAA----A--CTTCTCATGAAACTGTTAAAGAGAGTAAAAATGC 947 Query 954 TTTTGTGAGAACAAGCTTGGTTTTGGAATCTCAGAGTATCAAAAATGAAACAATTATGAC 1013 ||||| ||||||||||||| |||||||||||||||| |||||||||||||||| |||| | Sbjct 948 TTTTGAGAGAACAAGCTTGCTTTTGGAATCTCAGAGCATCAAAAATGAAACAAGTATGGC 1007 Query 1014 TACAAATAACCATGTGTGGTATCCGGTACCGATGACCCGCGAGAAGACAGA-GCAATTCA 1072 |||||||||||||||||||||||| |||||||||||||||||||||||| | | |||||| Sbjct 1008 TACAAATAACCATGTGTGGTATCCAGTACCGATGACCCGCGAGAAGACACAAG-AATTCA 1066 Query 1073 GCTTTTTCAGTAATGGAGCTGAAACAAAGAGCAACAACCAGAGATTCGTCCCTGAAACGT 1132 ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| Sbjct 1067 GCTTTTTCAGTAATGGAGCTGAAACAAAGAGCAGCAACAACAGATTCGTCCCTGAAACGT 1126 Query 1133 ATCTTAAGCTGCAAGCAAACCCTGCAGCCATGGCAAGATCTATGAACTTCAGAGAGAGCA 1192 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1127 ATCTTAACCTGCAAGCAAACCCTGCAGCCATGGCAAGATCTATGAACTTCAGAGAGAGCA 1186 Query 1193 TATAA 1197 ||||| Sbjct 1187 TATAA 1191 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58784838195 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5