BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg314675
Length=2196
Score E
Sequences producing significant alignments: (Bits) Value
AT1G53590.1 | Symbols: NTMC2TYPE6.1, NTMC2T6.1 | Calcium-depend... 1755 0.0
AT3G14590.2 | Symbols: NTMC2TYPE6.2, NTMC2T6.2 | Calcium-depend... 1070 0.0
> AT1G53590.1 | Symbols: NTMC2TYPE6.1, NTMC2T6.1 | Calcium-dependent
lipid-binding (CaLB domain) family protein | chr1:19996315-20000265
FORWARD LENGTH=2635
Length=2635
Score = 1755 bits (950), Expect = 0.0
Identities = 1135/1217 (93%), Gaps = 42/1217 (3%)
Strand=Plus/Plus
Query 1 ATGGAGTCTTCGTTAATTCATCATATTATCATTGTGTTGTTGTTACTCTGGTTCATCTCT 60
||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 242 ATGGAGTCTTCTTTAATTCATCATATCATCATTGTGTTGCTGTTACTCTGGTTCATCTCT 301
Query 61 TCCTTGAATCGATCCCACGCCTTTTTCTATTTCCTCGCTCTCATTTATCTCTACCTGGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 TCCTTGAATCGATCCCACGCCTTTTTCTATTTCCTCGCTCTCATTTATCTCTACCTGGTT 361
Query 121 CACGAACGGTATGTGATGAGATTGAAGAGAACATTGCAGTTTGAAGAGAGGAAGCAAGCT 180
||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 362 CACGAACGGTATGTGATGAGATTGAAGAGAAAATTGCAGTTCGAAGAGAGGAAGCAAGCA 421
Query 181 AGTCAGAGACGGGTTCTATCTGATTCTGAATCTGTGAGATGGATGAATTATGCTGTGGAG 240
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 AATCAGAGAAGGGTTCTATCTGATTCTGAATCTGTGAGATGGATGAATTATGCTGTGGAG 481
Query 241 AAGATATGGCCTATATGCATGGAACAGATTGCCTCTCAGAAGATTCTGGGTCCAATAATA 300
||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||
Sbjct 482 AAGATATGGCCAATATGCATGGAACAGATAGCGTCTCAGAAGATTCTGGGTCCAATCATA 541
Query 301 CCTTGGTTCTTGGAAAAATATAGACCTTGGACAGCGAAAAAAGCTGTGATACAGCACCTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 CCTTGGTTCTTGGAAAAATATAGACCTTGGACAGCGAAAAAAGCTGTGATACAGCACCTT 601
Query 361 TACATGGGAAGAAACCCACCTCTGTTGACTCATATTAGGGTCCTTCGCCAATCTACGGGT 420
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 602 TACATGGGAAGAAACCCACCTCTGTTGACTGATATTAGGGTCCTTCGTCAATCTACGGGT 661
Query 421 GATGATCACTTGGTATTGGAACTTGGAATGAATTTTCTCGCAGCAGATGATATGAGTGCA 480
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 662 GATGATCACTTGGTACTGGAACTTGGTATGAATTTTCTCGCAGCAGATGATATGAGTGCA 721
Query 481 ATACTTGCTGTGAAATTAAGGAAAAGGCTTGGTTTTGGGATGTGGACAAAGTTGCATTTG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 722 ATACTTGCTGTGAAATTAAGGAAAAGGCTTGGTTTTGGGATGTGGACAAAGTTGCATTTG 781
Query 541 ACGGGGATGCACGTGGAAGGAAAGGTGCTAATCGGAGTGAAGTTCCTTCGTCGGTGGCCT 600
|| || ||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 782 ACAGGAATGCACGTGGAAGGAAAGGTGTTGATCGGAGTGAAGTTCCTTCGTCGGTGGCCT 841
Query 601 TTCTTGGGGCGTTTACGTGTGTGTTTTGCAGAGCCTCCATATTTCCAGATGACTGTTAAA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 TTCTTGGGGCGTTTACGTGTGTGTTTTGCAGAGCCTCCATATTTCCAGATGACTGTTAAA 901
Query 661 CCAATCTTCACTCACGGGCTTGATGTTGCTGTACTTCCAGGTATCGCAGGATGGCTAGAT 720
|||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 902 CCAATCTTCACTCATGGGCTTGATGTTGCAGTACTCCCAGGTATCGCAGGATGGCTAGAT 961
Query 721 AAACTTCTTTCTATCGCATTTGAACAGACCCTTGTTCAGCCAAATATGCTTGTTGTTGAC 780
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 962 AAACTTCTTTCTATAGCATTTGAACAGACCCTTGTTCAGCCAAATATGCTTGTTGTTGAC 1021
Query 781 ATGGAGAAATTTGTTAGCC-AA----A-A---T-----C-------A-GA-AA-GAACCA 816
||||||||||||||||||| || | | | | | || || |||||
Sbjct 1022 ATGGAGAAATTTGTTAGCCCAACGTCAGAAAATTGGTTCTTTGTTGATGAGAAAGAACCG 1081
Query 817 GTTGCACACGTCTTAGTTGAAGTCTTTGAAGCATTAGATGTTAAACCATCTGATCTAAAT 876
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 1082 GTTGCACACGTCTTAGTTGAAGTCTTTGAAGCATCAGATCTTAAACCATCTGATCTAAAT 1141
Query 877 GGTTTGGCTGACCCTTATGTGAAAGGGAAACTTGGTGCTTACCGATTCAAAACCAAGACA 936
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1142 GGTTTGGCTGATCCTTATGTGAAAGGGAAACTTGGTGCTTACCGATTCAAAACCAAGATA 1201
Query 937 CAGAAGAAAACATTGTCCCCAAAATGGCAAGAAGAGTTTAAGATACCAATCTTTACATGG 996
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1202 CAGAAGAAAACATTGTCCCCGAAATGGCACGAAGAGTTTAAGATACCAATCTTTACATGG 1261
Query 997 GACTCTCCAAGTATACTTAACATTGAAGTTCGAGACAAAGACCGATTTGTGGATGATACC 1056
|| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1262 GATTCTCCTAGTATACTTAACATTGAAGTTGGAGACAAAGACCGATTTGTGGATGATACC 1321
Query 1057 CTTGGGTTTGTTCCTGAACCCTCTGAATGTTCAGTGAATATTGGAGAGTTTAGAGGCGGC 1116
||||| | | || | | | | |||||||||||| ||||||||||||||||
Sbjct 1322 CTTGG-T--G------AA---T--G--T-T-CAGTGAATATTGAAGAGTTTAGAGGCGGC 1363
Query 1117 CAAAGAAACGATATGTGGTTACCTCTTCAGGACATCAAAATGGGAAGGCTGCATCTTGCT 1176
|||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct 1364 CAAAGAAACGATATGTGGTTGTCTCTTCAGAACATCAAAATGGGAAGGCTTCATCTTGCT 1423
Query 1177 ATAACTGTAATTGAGGA 1193
||||| |||||||||||
Sbjct 1424 ATAACAGTAATTGAGGA 1440
Score = 1585 bits (858), Expect = 0.0
Identities = 961/1011 (95%), Gaps = 5/1011 (0%)
Strand=Plus/Plus
Query 1190 AGGAAGACATACAGACTTCTTTTGCTTCTGATACTACAAATCTAGGCTCTTTCTCGTCGG 1249
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1488 AGGAAGACATACAGACTTCTTTTGCTTCTGATACTACAAATTTAGGCTCTTTCTCGTCGG 1547
Query 1250 ACAAAGCTCCAAGTGTTGTGGATAACTTTGAGCCAATAACCATTGAAGGGCAAGAAGAGA 1309
||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1548 ACAAATCTCCAAGTGTTGTGGATAACTTTGAGCCAATAAAAATTGACGGGCAAGAAGAGA 1607
Query 1310 CTGGAATTTGGGTTCAAAAACCGGGAGCAGAAGTATCACAGATTTGGGAACCAAGAAAAG 1369
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1608 CTGCAATATGGGTTCAAAAACCGGGAGCAGAAGTATCACAGATTTGGGAACCAAGAAAAG 1667
Query 1370 GTAAGAGTAGACGTCTTGATAACCAAATACAAAGAAACCCTAATGATGGATCACTCAACA 1429
||||||||||||||||||||| |||||||||||||| ||||||||||| |||| | | ||
Sbjct 1668 GTAAGAGTAGACGTCTTGATAGCCAAATACAAAGAACCCCTAATGATGAATCATTGAGCA 1727
Query 1430 GTGGAAGCAGCAGCACCGACGACAATCAAGAGGGATCAAAGAATCCAATGAAGTCGGTTG 1489
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1728 ATGGAAGCAGCAGCACTGACGACAATCAAGAGGGATCAAAGAATCCAATGAAGTCTGTTG 1787
Query 1490 GTAGAGGATTGAGAAAAATCGGGTCAGTGTTTCACAGGCATGGCAAAAAGGAAGAATTTT 1549
||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||||
Sbjct 1788 GTAGAGGATTGAGGAAAATCGGGTCAATGTTTCACAGGAATGTCAAAAAGGAAGAATTTT 1847
Query 1550 TAATAGGAAGCATTGAAGAAGAG---CAGTCTCAGTCTCCTCGGATCAATCTGAAGGCAG 1606
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1848 TAATAGGAAGCATTGAAGAAGAGTCACAGTCTCAGTCTCCTCGGATCAATCTGAAGGCAG 1907
Query 1607 TAAACCAAAAGGATGTTGGACTTAACTTCATCGTTGATGACAATCTCTCGGGTCCACTTT 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1908 TAAACCAAAAGGATGTTGGACTTAACTTCATCGTTGATGACAATCTCTCGGGTCCACTTT 1967
Query 1667 CAGGCAAGAGTTTAGATTGTGAGAGTTTGGATGCAGAGGAACATTCAGGTAAAGGCCATA 1726
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1968 CAGGCAAGAGTTTAGATGGTGAGAGTTTGGATGCAGAGGAAAATTCAGGTAAAGGCCATA 2027
Query 1727 TGAAGGATGTGGCAAAGAGCTTTCTAAAACAAGCTGAGAAATCTGCAAAACA-ATTTAAG 1785
||||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||
Sbjct 2028 TGAAGGATGTGGCAAAGAGTTTTCTGAAACAAGCTGAGAAATCTGCAAAACAGATA-AAG 2086
Query 1786 CATGCGTTTTCGCGTAAAGGATCCATGAAACCAAGAGATGGGCAAAAAGAAATCGTTCct 1845
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2087 CATGCGTTTTCCCGTAAAGGATCCATGAAACCAAGAGATGGGCATAAAGAAATCGTTCCT 2146
Query 1846 gaatctgattctggatctgattctgaatcttctgatgatgatgattcGTTTACCTGTGTA 1905
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2147 GAATCTGATTCTGGAACTGATTCTGAATCTTCTGATGATGATGATGCGTTTACCTGTGTA 2206
Query 1906 AAGAACCTGGCAACAGAAACAGGAAAACTTACACGCGATGGGAATATTGTTAGAACAGGA 1965
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 2207 AAGAACCTGGCAACAGAACCAGGAAAACTTACACGCGATGGGAATATTGAAAGAACAGGA 2266
Query 1966 GATGAAGATCATGTAGATTCAACAACATTAGCAAACGCTAAGGAAGATTCAAGTGGTGAT 2025
||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2267 GATGATGATCATGTAGATTCAACAACATTAGCAACCGCTAAGGAAGATTCAAGTGGTGAT 2326
Query 2026 ATGGCAGAGAATTCGACAGATGTTGAAGCTAAAGATGAGAAACTAGAGGAAGCAGCAGAG 2085
|| |||| ||||||||||||||||||||||||| |||||| || ||||||||||||||
Sbjct 2327 ATATTAGAGGATTCGACAGATGTTGAAGCTAAAGAGGAGAAATTAAAGGAAGCAGCAGAG 2386
Query 2086 TCAGAAACTAGAGATATTGACACCGCCATGAACATCAAAACTGAAGATGAGAAAGGAGAG 2145
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2387 TCAGAAACTAGAGATATGGACACCGCCATGAACATCAAAACTGAAGATGAGAAAGGAGAC 2446
Query 2146 ACGCTTAAAAATATCCAAGAAGGGGAAGAAAAGGAATCATCTTCAAACTAA 2196
||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 2447 ACGCTTAAAAATATCGAAGAAGGGGAAGAAAAGGAATCATCTTCAAAGTAA 2497
> AT3G14590.2 | Symbols: NTMC2TYPE6.2, NTMC2T6.2 | Calcium-dependent
lipid-binding (CaLB domain) family protein | chr3:4904278-4907992
REVERSE LENGTH=2635
Length=2635
Score = 1070 bits (579), Expect = 0.0
Identities = 1024/1230 (83%), Gaps = 65/1230 (5%)
Strand=Plus/Plus
Query 1 ATGGAGTCTTCGTTAATTCATCATATTATCATTGTGTTGTTGTTACTCT-GGTTCATCTC 59
||||||| |||| |||| |||||| | | |||||||| ||||||| | ||||| | ||
Sbjct 252 ATGGAGTGTTCGGTAATCCATCATGTGGTGATTGTGTTACTGTTACTTTGGGTTC-TATC 310
Query 60 TTCCTTGAATCGATCCCACGCCTTTTTCTATTTCCTCGCTCTCATTTATCTCTACCTGGT 119
|| |||||||||||| ||||| |||||||| ||||| ||||| ||||||| ||||||||
Sbjct 311 TTACTTGAATCGATCACACGCGGTTTTCTATGTCCTCTCTCTCGTTTATCTTTACCTGGT 370
Query 120 TCACGAACGGTATGTGATGAGATTGAAG-AGAACATTGCAGTTTGAAGAGAGGAAGCAAG 178
||| ||||| |||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 371 TCATGAACGCTATGTGATGAGATTGAGGAAGAA-ATTGCAGTTTGAAGAGAGGAAGCAAG 429
Query 179 CTAGTCAGAGACGGGTTCTATCTGATTCTGAATCTGTGAGATGGATGAATTATGCTGTGG 238
||| |||||||| |||||||||||||||||||| ||| | ||| ||||| |||| ||||
Sbjct 430 CTAACCAGAGACGTGTTCTATCTGATTCTGAATCGGTGCGGTGGTTGAATCATGCCGTGG 489
Query 239 AGAAGATATGGCCTATATGCATGGAACAGATTGCCTCTCAGAAGATTCTGGGTCCAATAA 298
||| |||||||||||| || |||||||||||||| |||||||||||||| |||| || |
Sbjct 490 AGAGGATATGGCCTATTTGTATGGAACAGATTGCTTCTCAGAAGATTCTTCGTCCGATCA 549
Query 299 TACCTTGGTTCTTGGAAAAATATAGACCTTGGACAGCGAAAAAAGCTGTGATACAGCACC 358
|||||||||||||||| || |||||||||||||| |||||||||| ||||||||| ||||
Sbjct 550 TACCTTGGTTCTTGGACAAGTATAGACCTTGGACTGCGAAAAAAGTTGTGATACAACACC 609
Query 359 TTTACATGGGAAGAAACCCACCTCTGTTGACTCATATTAGGGTCCTTCGCCAATCTACGG 418
|||| ||||||||||||| ||| ||||||| |||||||||| || || ||||||||||
Sbjct 610 TTTATTTGGGAAGAAACCCTCCTTTGTTGACAGATATTAGGGTTCTACGGCAATCTACGG 669
Query 419 GTGATGATCACTTGGTATTGGAACTTGGAATGAATTTTCTCGCAGCAGATGATATGAGTG 478
||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||| |
Sbjct 670 GTGATGATCACTTGGTACTGGAACTTGGAATGAATTTCCTCACAGCAGATGATATGAGCG 729
Query 479 CAATACTTGCTGTGAAATTAAGGAAAAGGCTTGGTTTTGGGATGTGGACAAAGTTGCATT 538
||||||| |||||||| ||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct 730 CAATACTCGCTGTGAAGTTAAGAAAAAGACTTGGGTTTGGAATGTGGACAAAGTTGCATT 789
Query 539 TGACGGGGATGCACGTGGAAGGAAAGGTGCTAATCGGAGTGAAGTTCCTTCGTCGGTGGC 598
|||| || ||||| || |||||||||||| | || |||||||||||||||||||| ||||
Sbjct 790 TGACAGGAATGCATGTTGAAGGAAAGGTGTTGATTGGAGTGAAGTTCCTTCGTCGATGGC 849
Query 599 CTTT-CTTGGGGCGTTTACGTGTGTGTTTTGCAGAGCCTCCATATTTCCAGATGACTGTT 657
|||| || ||| |||||||| ||||||||||||||||| || |||||||| |||||||||
Sbjct 850 CTTTTCTCGGG-CGTTTACGAGTGTGTTTTGCAGAGCCACCTTATTTCCAAATGACTGTT 908
Query 658 AAACCAATCTTC-ACTCACGGGCTTGATGTTGCTGTACTTCCAGGTATCGCAGGATGGCT 716
|||||||| | | ||||| || |||||||||||||| |||||||| || |||||||||||
Sbjct 909 AAACCAAT-TACCACTCATGGACTTGATGTTGCTGTGCTTCCAGGGATTGCAGGATGGCT 967
Query 717 AGATAAACTTCTT-TCTATCGCATTTGAACAGACCCTTGTTCAGCCAAATATGCTTGTTG 775
||| |||||| || ||| | |||||||| ||||| |||||| ||||||||||||| || |
Sbjct 968 AGACAAACTT-TTGTCTGTTGCATTTGAGCAGACTCTTGTTGAGCCAAATATGCTGGTAG 1026
Query 776 TTGACATGGAGAAATTTGTTAGCCAAAA-TCAGAA-AGAAC-----CA--GTTGC--ACA 824
|||| ||||||||||||||||||| | | |||| | | || | |||| | |
Sbjct 1027 TTGATATGGAGAAATTTGTTAGCCCAGAGTCAGGAGATAATTGGTTCTTTGTTGATGAGA 1086
Query 825 C-GT-CTTAGTTG-A-A-G-TCTT-T-GAAG-CATT-A-G-ATGT--T---AAACCATCT 867
| | ||| | | | | |||| | |||| | || | | |||| | ||||||||
Sbjct 1087 AAGAACC-AGTAGCACACGCTCTTGTTGAAGTCGTTGAAGCATGTGATGTTAAACCATCA 1145
Query 868 GATCTAAATGGTTTGGCTGACCCTTATGTGAAAGGGAAACTTGGTGCTTACCGATTCAAA 927
|||||||| ||||| ||||| ||||| ||||||||| | ||||| |||||| ||||||||
Sbjct 1146 GATCTAAACGGTTTAGCTGATCCTTACGTGAAAGGGCAGCTTGGCGCTTACAGATTCAAA 1205
Query 928 ACCAAGACACAGAAG-AAAACATTGTC-CCCAAAATGGCAAGAAGAGTTTAAGATACCAA 985
||||||| || | | ||||| ||| | |||||| |||||||||||||| ||||||||||
Sbjct 1206 ACCAAGATACT-ATGGAAAACCTTGGCTCCCAAA-TGGCAAGAAGAGTTCAAGATACCAA 1263
Query 986 TCTTTACATGGGACTCTC-CAAGTATACTTAACATTGAAGTTCGAGACAAAGACCGATTT 1044
||| ||||||||||| | ||| ||| |||||||||||||||| ||||||||||||||||
Sbjct 1264 TCTGCACATGGGACTC-CGCAAATATTCTTAACATTGAAGTTCAAGACAAAGACCGATTT 1322
Query 1045 -GTGGATGATACCCTTGGGTTTGTTCCTGAACCCTCTGAATGTTCAGTGAATATTGGAGA 1103
| | |||| | ||||| | || | | | | | ||||||| |||| |||
Sbjct 1323 AGCG-ATGACAGTCTTGG-------C--GA-C--T--G--T-T-CAGTGAACATTGCAGA 1363
Query 1104 GTTTAGAGGCGGCCAAAGAAACGATATGTGGTTACCTCTTCAGGACATCAAAATGGGAAG 1163
|||| |||||||||||||||| ||||||||||| ||||||||| |||| |||||||| ||
Sbjct 1364 GTTTCGAGGCGGCCAAAGAAATGATATGTGGTTGCCTCTTCAGAACATTAAAATGGGGAG 1423
Query 1164 GCTGCATCTTGCTATAACTGTAATTGAGGA 1193
|||| ||||||||||| ||| |||||||
Sbjct 1424 ATTGCACCTTGCTATAACCGTACTTGAGGA 1453
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108935182650
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5