BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg314728 Length=291 Score E Sequences producing significant alignments: (Bits) Value AT1G54210.1 | Symbols: APG12, ATG12A, ATATG12 | Ubiquitin-like ... 499 5e-141 > AT1G54210.1 | Symbols: APG12, ATG12A, ATATG12 | Ubiquitin-like superfamily protein | chr1:20241245-20242563 FORWARD LENGTH=631 Length=631 Score = 499 bits (270), Expect = 5e-141 Identities = 284/291 (98%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 1 ATGGCGATGGAGTCGTCGTCCCCGGGCTCTGTTCGGAAAGTTGTTGTTCATCTAAGAGCT 60 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 34 ATGGCGACGGAGTCGTCGTCCCCGAGCTCTGTTCGGAAAGTTGTTGTTCATCTAAGAGCT 93 Query 61 ACTGGAGGTGCTCCTATACTCAAACAATCTAAGTTCAAGATTCCGGGGACTGATAAATTT 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 94 ACTGGAGGTGCTCCTATACTCAAACAATCTAAGTTCAAGATTCCAGGGACTGATAAATTT 153 Query 121 GCTAAAGTGATTGACTTTCTAAGAAGACAGCTTCATTCTGACTCATTGTTTGTCTATGTG 180 || ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct 154 GCCAAAGTGATTGACTTTCTTAGAAGACAGCTTCATTCTGATTCGTTGTTTGTCTATGTG 213 Query 181 AATAGTGCTTTCTCGCCAAACCCTGATGAATCAGTCATTGATCTTTATAATAACTTTGGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 214 AATAGTGCTTTCTCGCCAAACCCTGATGAATCAGTCATTGATCTTTATAATAACTTTGGA 273 Query 241 TTTGATGGTAAACTGGTGGTTAACTATGCTTGTTCCATGGCATGGGGCTAA 291 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 274 TTTGATGGTAAACTGGTGGTTAACTATGCTTGTTCCATGGCATGGGGCTAA 324 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13421488983 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5