BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg314966 Length=1737 Score E Sequences producing significant alignments: (Bits) Value AT1G57770.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase fam... 2610 0.0 > AT1G57770.1 | Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr1:21395196-21398280 FORWARD LENGTH=1928 Length=1928 Score = 2610 bits (1413), Expect = 0.0 Identities = 1638/1744 (94%), Gaps = 26/1744 (1%) Strand=Plus/Plus Query 1 ATGGCCGCCAATTTCTGCGGCTCGACGCTTCAGTCTCCGTTTCTCTGTAACTTTAGACGA 60 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| || Sbjct 59 ATGGCCGCCAATTTCTGCGGCTTGACGCTTCAGTCTCCGTTTCTCTATAACTTTAGTCGC 118 Query 61 CCAACGATCAGATCTTCTTCCTTCATAC-G-----GTCTTCTTCATCAACCTCTTCCAAT 114 |||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| Sbjct 119 CCAACGATCAGATCTTCTTCCTTCATACGGTCTTCGTCTTCTTCATCAGCCTCTTCCAAT 178 Query 115 GGCAATCTTCCCATCAAAGAATCTTTCTCTGGAGAGCCTGAAGCAGATGTTGTGGTTATT 174 ||||||| | | |||||| | |||||||| ||||||||||||||||||||||| ||| Sbjct 179 GGCAATC-T----T-AAAGAACCCTTCTCTGGGGAGCCTGAAGCAGATGTTGTGGTAATT 232 Query 175 GGAAGTGGCATAGGAGGATTATGTTGTGGTGCATTGTTAGCTAGGTATGATCAGGATGTG 234 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 233 GGAAGTGGGATAGGAGGATTATGTTGTGGTGCATTGTTAGCTAGATATGATCAGGATGTG 292 Query 235 GTTGTTTTGGAGAGCCATGACCATCCCGGTGGCGCGGCTCATTCATTTGAGATCAAAGGG 294 ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 293 ATTGTTTTGGAGAGTCATGACCATCCCGGTGGCGCTGCTCATTCCTTTGAGATCAAAGGG 352 Query 295 TACAAGTTTGACTCAGGTCCTTCTCTGTTTTCTGGTTTGCAATCACGAGGTCCTCAAGCC 354 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 353 TACAAGTTTGACTCAGGTCCTTCTCTGTTTTCTGGTTTACAATCGCGAGGTCCTCAAGCA 412 Query 355 AATCCACTTGCTCAAGTTCTTGATGCTTTAGGGGAATCACTTCCATGT-AGCAAATATGA 413 ||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| Sbjct 413 AATCCACTTGCTCAAGTTCTTGATGCTTTAGGGGAATCATTTCCATGTAAG-AAATATGA 471 Query 414 TTCTTGGATGGTTTATTTACCCGAAGGAGATTTCTTGTCACGTATAGGCCCTACCGATTT 473 ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| Sbjct 472 TTCTTGGATGGTTTACTTACCCGAAGGTGATTTCTTGTCACGAATAGGCCCTACGGATTT 531 Query 474 CTTTAAGGATCTAGAGAAATATGCCGGTCCTAGCGCAGTCCAGGAGTGGGAAAAGCTTCT 533 |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| | Sbjct 532 CTTTAAGGATCTTGAGAAATATGCCGGTCCAAGCGCAGTGCAGGAGTGGGAAAAG---C- 587 Query 534 TGTGGGTGCCTATGGAGCAATACTCCCACTGTCTTCTGCTGCTATGGCGTTACCACCATT 593 | | || ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 588 --T---T--CT-TGGAGCAATACTCCCTCTGTCTTCTGCTGCTATGGCGTTACCACCATT 639 Query 594 GTCTATTCGCGGGGATCTTGGTGTTCTCTCTACGGCTGCTGCTAGATATGCTCCTTCCCT 653 |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 640 GTCTATTCGCGGGGATCTTGGTGTTCTCTCCACAGCTGCTGCTAGATATGCTCCTTCGCT 699 Query 654 GATGAAATCTTTTATCAAAATGGGTCCTAAAGGAGCGTTGGGAGCCACAAAGCTTCTCCG 713 | ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 700 TTTAAAATCTTTTATCAAAATGGGTCCTAAAGGAGCGTTGGGAGCGACAAAACTTCTCCG 759 Query 714 CCCGTTCTCGGAGATCGTTGATTCTTTGGAGTTGAAAGATCCGTTTATACGAAACTGGAT 773 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 760 CCCGTTCTCGGAGATCGTTGATTCTTTGGAGTTAAAAGACCCGTTTATACGAAACTGGAT 819 Query 774 TGATCTTCTCGCATTTCTTCTCGCAGGGGTCAAATCTGATGGAATACTTTCAGCAGAGAT 833 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct 820 TGATCTTCTCGCATTCCTGCTCGCAGGGGTCAAATCTGATGGCATACTTTCAGCAGAGAT 879 Query 834 GATCTACATGTTTGCGGAATGGTACAAGCCAGGCTGCACACTGGAGTACCCTATTGATGG 893 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct 880 GATCTACATGTTTGCAGAATGGTACAAGCCAGGCTGCACATTGGAGTACCCTATTGATGG 939 Query 894 AAGCGGTGCGGTGGTTGAAGCGCTTGTCCGTGGCTTAGAGAAGTTTGGAGGACGTCTGTC 953 | |||||| |||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 940 CACCGGTGCTGTGGTTGAAGCGCTTGTCCGTGGCTTGGAGAAGTTTGGTGGACGTCTATC 999 Query 954 TCTTAATAGTCATGTTGAGAACATTGTCATCGAGGATGGTAAAGCTGTTGGAGTCAAGCT 1013 |||||| |||||||| || |||||||| |||||| ||||||||||||||||||||||||| Sbjct 1000 TCTTAAAAGTCATGTCGAAAACATTGTTATCGAGAATGGTAAAGCTGTTGGAGTCAAGCT 1059 Query 1014 AAAGAATGGTCAATTCATTCGAGCTAGAAAAGCTGTGGTTAGCAATGCATCGATGTGGGA 1073 || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1060 AAGGAATGGTCAATTTGTTCGAGCTAGAAAAGCTGTGGTTAGCAATGCATCGATGTGGGA 1119 Query 1074 TACTTTAAAGCTCTTACCTCCAGGAGCTCTCCCAGATTCATACGTAAAAGGTGTGAACAC 1133 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1120 TACTTTAAAGCTCTTACCTCCAGGAGCTCTCCCAGAATCATATGTAAAAGGTGTGAACAC 1179 Query 1134 AACACCTCAATGTGAGTCATTCATGCATCTTCACTTGGGATTCGACGCAGAGGGAATAGC 1193 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1180 AACACCTCAATGTGAATCATTCATGCATCTTCACTTGGGATTCGACGCAGAGGGAATAGC 1239 Query 1194 AGATGACCTTGAGATTCATCATATCGTTGTGAATGACTGGGACCGCGGTGTGGATGCTGA 1253 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1240 AGATGATCTTGAGATTCATCATATCGTTGTGAATGACTGGGACCGCGGTGTGGATGCTGA 1299 Query 1254 CCAGAATGTGGTTCTGATATCAGTCCCTAGTGTTCTTAGCCCAAACCTTGCGCCACCGGG 1313 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1300 CCAGAATGTGGTTCTGATATCTGTCCCTAGTGTTCTTAGCCCAAACCTTGCACCACCGGG 1359 Query 1314 AAAACATGTTCTACACGCTTACTGTCCTGGAACTGAACCTTTCAGTCTCTGGGAAGGTCT 1373 ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| Sbjct 1360 AAAACATGTTCTACACGCTTACTGTCCTGGAACCGAACCTTTCGGTCTGTGGGAAGGTCT 1419 Query 1374 TGACAGAAGAAGTGCGGAGTACAAGAATCTCAAATCCCAACGGTCTGAGGTGATGTGGAG 1433 ||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1420 TGATAGAAGAAGTGCCGAGTACAAGAATCTCAAATCCCAACGGTCCGAGGTGATGTGGAG 1479 Query 1434 AGCGGTGGAACGGGCATTAGGGCCCGGGTTTAAAAGAGAAAAGTGCGAGGTGAGTTTGAT 1493 |||||| || ||||||||||||| ||||| ||||||||||||||||||||||||||| | Sbjct 1480 AGCGGTTGAGCGGGCATTAGGGCTAGGGTTCAAAAGAGAAAAGTGCGAGGTGAGTTTGGT 1539 Query 1494 TGGAACACCATTGACGCATCAGAGGTTTCTAAGGAGGAATAGAGGAACATATGGGCCTGC 1553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1540 TGGAACACCATTGACGCATCAGAGGTTTCTAAGGAGGAATAGAGGAACATATGGGCCTGC 1599 Query 1554 AATAGAGGCTGGTAAAGGTACTTTTCCTGGCCATTCCACTCCCATTCCGCAGCTTTTGTG 1613 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1600 AATAGAGGCAGGTAAAGGTACTTTTCCTGGCCATTCCACTCCCATTCCGCAGCTTTTGTG 1659 Query 1614 TTGCGGTGACTCGACCTTTCCCGGGATCGGAGTTCCTGCAGTGGCAGCTAGTGGCGCGAT 1673 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1660 TTGCGGTGACTCGACCTTTCCCGGGATCGGAGTTCCTGCAGTGGCAGCTAGCGGCGCGAT 1719 Query 1674 TGTGGCGAATTCGCTAGTTCCTGTTTCTAAGCATTCCCAGCTTCTTGATGCTATTGGCTT 1733 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct 1720 TGTGGCGAATTCGCTAGTTCCTGTTTCCAAGCATTCACAGCTTCTTGATGCCATTGGCTT 1779 Query 1734 ATAG 1737 ||| Sbjct 1780 GTAG 1783 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85893132495 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5