BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg315014 Length=864 Score E Sequences producing significant alignments: (Bits) Value AT1G64200.1 | Symbols: VHA-E3 | vacuolar H+-ATPase subunit E is... 1157 0.0 AT1G64195.1 | Symbols: | Defensin-like (DEFL) family protein |... 241 1e-62 > AT1G64200.1 | Symbols: VHA-E3 | vacuolar H+-ATPase subunit E isoform 3 | chr1:23828526-23830002 REVERSE LENGTH=725 Length=725 Score = 1157 bits (626), Expect = 0.0 Identities = 674/698 (97%), Gaps = 0/698 (0%) Strand=Plus/Plus Query 1 ATGAACGACGCCGATGCTTCCGTCCAGATCCAGCAGATGGTCAGGTTTATCCGCCAGGAA 60 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 1 ATGAACGACGCCGATGCTTCCATCCAGATCCAGCAGATGGTTAGGTTTATCCGCCAGGAA 60 Query 61 GCCGAAGAAAAGGCTAACGAGATCTCCATCTCCTCCGAGGAAGAATTCAACattgagaaa 120 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 61 GCCGAAGAAAAGGCTAACGAGATCTCCATCTCCTCTGAAGAAGAATTCAACATTGAGAAA 120 Query 121 ttgcagattgttgaagcagagaagaagaagattagacaagagtatgagaagaaggagaaa 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TTGCAGCTTGTTGAAGCAGAGAAGAAGAAGATTAGACAAGAGTATGAGAAGAAGGAGAAA 180 Query 181 caggtcgatgtcagaaagaagaTTGATTACTCGATGCAACTGAACGCGTCGAGGATCAAG 240 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 181 CAGGTCGATGTCAGAAAGAAGATTGATTACTCAATGCAACTGAACGCATCGAGGATCAAA 240 Query 241 GTTCTACAAGCCCAAGATGACATTGTCAATGCAATGAAAGAAGAGGCAGCTAAGGAACTC 300 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 241 GTTCTACAAGCGCAAGATGACATTGTCAATGCAATGAAAGAAGAGGCAGCTAAGCAACTC 300 Query 301 TTGAAAGTTAGCCAACATGGCTTTTTCAATCATCATCACCATCAGTATAAGCATCTCTTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTGAAAGTTAGCCAACATGGCTTTTTCAATCATCATCACCATCAGTATAAGCATCTCTTG 360 Query 361 AAAGATCTCATTGTTCAGTGTTTGCTTCGATTGAAAGAGCCTGCAGTGTTACTTCGTTGT 420 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct 361 AAAGATCTCATTGTTCAGTGTTTGCTTAGATTGAAAGAGCCTGCAGTGTTACTCCGTTGT 420 Query 421 CGTAAAGAAGATCTTCACATGGTTGAGTCTATGCTGGATGATGCTAGTGAAGAATATTGC 480 ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 421 CGTGAAGAAGATCTTGACATTGTTGAGTCTATGCTGGATGATGCTAGTGAAGAATATTGC 480 Query 481 AAGAAAGCAAAGGTTCATGCTCCTGAGATCATTGTCGACAAGGACATTTTCCTTCCTCCT 540 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 481 AAGAAAGCAAAGGTTCATGCTCCTGAGATTATTGTAGACAAGGACATTTTCCTTCCTCCT 540 Query 541 GCTCCTTCAGATGATGATCCTCATGCTCTTTCCTGTGCAGGAGGAGTGGTGTTGGCTTCT 600 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 541 GCTCCTTCAGATGATGATCCTCATGCTCTTTCCTGTGCAGGAGGAGTGGTTTTGGCTTCT 600 Query 601 CGTGATGGGAAAATCGTGTGTGAAAACACGCTTGATGCGAGGTTGGAAGTTGCGTTCCGC 660 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 601 CGTGATGGGAAAATCGTGTGTGAAAACACGCTTGATGCGAGGTTGGAGGTTGCCTTCCGC 660 Query 661 AATAAACTTCCCGAGATACGAAAGTCACTCTTTGGCAA 698 ||||||||||| ||||| |||||||| ||||| ||||| Sbjct 661 AATAAACTTCCAGAGATCCGAAAGTCGCTCTTCGGCAA 698 > AT1G64195.1 | Symbols: | Defensin-like (DEFL) family protein | chr1:23827711-23828048 REVERSE LENGTH=219 Length=219 Score = 241 bits (130), Expect = 1e-62 Identities = 150/160 (94%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 705 AGAAGCAAAAAGTATGAATCCAACGGGAAGACGATGCCCAGATCCTAACGGTGTGGACaa 764 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 60 AGATGCAAAAAGTATGAATCCAACGGGAAGACGATGCCCAGATCCTAACGGTGTGGAGAA 119 Query 765 aaaaaGTGTGTGTTATGGTTACTGTAAGACACAAGGTTTTATGGGTGGTTCTTGTCAAGG 824 |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 120 GAAAAGTATGTGTTACAGTTCCTGTAAGACACAAGGTTTTATGGGTGGTTCTTGTCAAGG 179 Query 825 CCACACGGGTAATTATATGTGCAAGTGTTATGAAGGATAA 864 ||||| ||||||||| |||||| ||||||||||||||||| Sbjct 180 CCACAAGGGTAATTACATGTGCGAGTGTTATGAAGGATAA 219 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42146449333 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5