BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg315469 Length=1704 Score E Sequences producing significant alignments: (Bits) Value AT1G65060.1 | Symbols: 4CL3 | 4-coumarate:CoA ligase 3 | chr1:2... 2737 0.0 > AT1G65060.1 | Symbols: 4CL3 | 4-coumarate:CoA ligase 3 | chr1:24167202-24171502 REVERSE LENGTH=1914 Length=1914 Score = 2737 bits (1482), Expect = 0.0 Identities = 1634/1705 (96%), Gaps = 20/1705 (1%) Strand=Plus/Plus Query 1 ATGATAACTGCAGCTCTACACGAACCTCAGATTCACAAACCAACCGATACATCCGTCGTC 60 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46 ATGATCACTGCAGCTCTACACGAACCTCAGATTCACAAACCAACCGATACATCCGTCGTC 105 Query 61 TCCGGCGATATGCTtcctcctcctcctcctccacctcctATGCCTCGCATTTTCCGGTCA 120 |||| ||| ||| | ||||| | | || ||||||| ||||||||||||||||||| Sbjct 106 TCCGATGATGTGC-T--TCCTCAT--T-CT---CCTCCTACGCCTCGCATTTTCCGGTCA 156 Query 121 AAGCTTCCGGACATTGACATCCCTAACCACCTACCTCTCCACACTTACTGCTTCGAAAAA 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 157 AAGCTTCCGGACATTGACATCCCTAACCACCTCCCTCTCCACACTTACTGCTTCGAAAAA 216 Query 181 CTCTCATCTGTTTCCGACAAGCCTTGTCTCATTGTTGGCTCCACCGGAAAAAGCTATACC 240 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct 217 CTCTCATCTGTTTCCGACAAGCCTTGTCTCATCGTTGGCTCCACCGGGAAAAGCTACACC 276 Query 241 TACAGCGAAACACACCTAATCTGCCGGAGAGTCGCTTCCGGATTATACAAGTTAGGTATC 300 ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 277 TACGGCGAAACACACCTAATCTGTCGGAGAGTCGCTTCCGGGTTATACAAGTTAGGTATC 336 Query 301 AGAAAAGGTGACGTCATCATGATCCTTCTCCAAAACTCAGCCGAGTTCGTCTTCTCCTTC 360 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 337 AGAAAAGGTGACGTCATCATGATCCTTCTCCAAAACTCAGCCGAGTTCGTTTTCTCCTTC 396 Query 361 ATGGGTGCTTCCATGATCGGAGCCGTCTCAACCACCGCAAACCCTTTCTACACTTGTCAA 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 397 ATGGGTGCTTCCATGATCGGAGCCGTCTCAACCACCGCAAACCCTTTCTACACTTCTCAA 456 Query 421 GAGATTTATAAACAGCTTAAATCTTCCGGAGCTAAACTCATAATCACTCACTCTCAATAC 480 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 457 GAGCTTTATAAACAGCTTAAATCTTCCGGAGCCAAACTCATAATCACTCACTCTCAATAC 516 Query 481 GTCGATAAACTTAAAAACCTCGGAGAAAACCTCACGGTGATCACCACCGATGAACCAACA 540 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 517 GTCGATAAACTTAAAAACCTCGGAGAAAACCTCACGCTGATCACTACCGATGAACCAACA 576 Query 541 CCGGAGAATTGTCTACCATTCTCAACACTCATCACCGACGACGAGACAAACCCATTTCAA 600 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 577 CCGGAGAATTGTCTACCATTCTCGACACTCATCACCGACGACGAAACAAACCCATTTCAA 636 Query 601 GAAACCGTAGATATTGGCGGTGACGATGCGGCGGCGCTT-CCATTCTCATCGGGAACAAC 659 |||||||| ||||| ||||||||||||||||||||| || |||||||||||||||||||| Sbjct 637 GAAACCGTCGATATCGGCGGTGACGATGCGGCGGCG-TTACCATTCTCATCGGGAACAAC 695 Query 660 AGGGTTACCAAAAGGAGTTGTTTTGACACACAAGAGCTTAATCACAAGCGTTGCACAACA 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 696 AGGGTTACCAAAAGGAGTTGTTTTGACACACAAGAGCTTAATCACAAGCGTTGCACAACA 755 Query 720 AGTAGATGGAGATAACCCAAATCTTTACCTCAAATCAAACGACGTCCTACTCTGCGTTTT 779 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 756 AGTAGATGGAGATAACCCAAATCTTTACCTCAAATCAAACGACGTCATACTCTGCGTTTT 815 Query 780 ACCACTTTTCCATATCTACTCTCTTAATAGCGTCCTCCTCAATTCACTCCGATCCGGTGC 839 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 816 ACCACTTTTCCATATCTACTCTCTCAATAGCGTCCTCCTCAATTCACTCCGATCCGGCGC 875 Query 840 CACGGTTCTTTTAATGCATAAGTTTGAGATCGGTGCGCTATTGGATCTTATTCAAAGACA 899 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 876 CACGGTTCTTTTAATGCATAAGTTTGAGATCGGTGCGTTATTGGATCTTATTCAAAGACA 935 Query 900 TAGAGTGACAATAGCGGCGCTTGTACCGCCGCTAGTGATCGCTCTAGCTAAAAACCCGAC 959 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 936 TAGAGTGACAATAGCGGCGCTTGTACCGCCGCTAGTGATCGCTCTAGCTAAAAACCCGAC 995 Query 960 TGTTAACTCTTATGATCTCTCCTCCGTTAGATTGGTTCTCTCCGGTGCAGCTCCTTTAGG 1019 ||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 996 GGTTAATTCTTATGATCTCTCCTCCGTTAGATTCGTTCTTTCCGGTGCAGCTCCTTTAGG 1055 Query 1020 TAAAGAACTTCAAGATAGTCTCCGTCGCCGTCTCCCTCAAGCCATCCTTGGCCAGGGATA 1079 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1056 TAAAGAACTTCAAGATAGTCTTCGTCGCCGTCTCCCTCAAGCCATCCTTGGCCAGGGATA 1115 Query 1080 TGGTATGACGGAAGCAGGACCAGTGTTGTCAATGAGCCTTGGGTTCGCTAAAGAACCGAT 1139 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1116 TGGTATGACGGAGGCAGGACCAGTGTTGTCAATGAGCCTTGGGTTCGCTAAAGAACCGAT 1175 Query 1140 GCCGACAAAATCAGGTTCATGTGGGACTGTGGTCCGAAACGCAGAGCTTAAAGTGGTTCA 1199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1176 ACCGACAAAATCAGGTTCATGTGGGACTGTGGTCCGAAACGCAGAGCTTAAAGTGGTTCA 1235 Query 1200 CCTTGAGACACGTCTCTCTCTTGGTTACAACCAACCTGGTGAGATTTGTATCCGCGGTCA 1259 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1236 CCTTGAGACACGTCTCTCTCTTGGATACAACCAACCTGGTGAGATTTGTATCCGCGGTCA 1295 Query 1260 ACAAATCATGAAAGAGTACTTGAACGACCCAGAAGCCACTTCAGCAACAATAGACGAAGA 1319 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1296 ACAGATCATGAAAGAGTACTTGAACGATCCAGAAGCCACTTCAGCAACAATAGACGAAGA 1355 Query 1320 AGGTTGGCTTCACACAGGAGACATTGGGTATGTTGACGAAGATGATGAGATCTTCATTGT 1379 ||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct 1356 AGGTTGGCTTCACACAGGAGACATTGGATATGTTGATGAAGATGATGAGATTTTCATTGT 1415 Query 1380 TGATCGACTTAAAGAAGTCATCAAGTTCAAAGGCTTTCAGGCAAAACAGGTCCCTCCGGC 1439 ||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 1416 TGATCGACTTAAAGAAGTCATCAAGTTCAAAGGCTTTCAGG---------TCCCTCCAGC 1466 Query 1440 TGAGCTAGAGAGTTTGCTAATCAATCATCATTCAATTGCGGATGCTGCTGTTGTTCCGCA 1499 ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct 1467 TGAGCTAGAGAGTTTGCTAATCAATCACCATTCAATTGCCGATGCAGCTGTTGTTCCGCA 1526 Query 1500 AAACGATGAAGTCGCTGGGGAAGTTCCGGTGGCTTTCGTGGTGCGATCAAATGGAAATGA 1559 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1527 AAATGATGAAGTCGCTGGGGAAGTTCCGGTGGCTTTCGTGGTGCGATCAAATGGAAATGA 1586 Query 1560 TATCACTGAAGAAGATATTAAAGAATATGTTGCCAAACAGGTGGTGTTCTATAAGAGATT 1619 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1587 TATCACTGAAGAAGATGTTAAAGAATATGTTGCCAAACAGGTGGTGTTCTATAAGAGATT 1646 Query 1620 GCACAAGGTTTTCTTTGTTGCTTCCATTCCTAAATCTCCTTCTGGAAAAATTCTGAGAAA 1679 ||||||||| |||||||||||||||||||||||||||||||| |||||||| || ||||| Sbjct 1647 GCACAAGGTCTTCTTTGTTGCTTCCATTCCTAAATCTCCTTCGGGAAAAATACTAAGAAA 1706 Query 1680 GGACCTCAAAGCTAAACTTTGTTGA 1704 ||||||||||||||| ||||||||| Sbjct 1707 GGACCTCAAAGCTAAGCTTTGTTGA 1731 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84236514510 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5