BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg315497 Length=483 Score E Sequences producing significant alignments: (Bits) Value ATCG00810.1 | Symbols: RPL22 | ribosomal protein L22 | chrC:834... 837 0.0 > ATCG00810.1 | Symbols: RPL22 | ribosomal protein L22 | chrC:83467-83949 REVERSE LENGTH=483 Length=483 Score = 837 bits (453), Expect = 0.0 Identities = 473/483 (98%), Gaps = 0/483 (0%) Strand=Plus/Plus Query 1 ATGATAAAGAAGAGAAAGAAGAAATCATATACTTCCGTATATGCTTTAGGGCAATATATA 60 ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 1 ATGATAAAGAAGAGAAAAAAGAAATCATATACGGAAGTATATGCTTTAGGGCAATATATA 60 Query 61 TCTATGTCTGCCCATAAAGCACGGAGAGTTATTGATCAAATACGTGGACGTTCCTACGAA 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 61 TCTATGTCTGCCCATAAAGCACGGAGAGTAATTGATCAAATACGTGGACGTTCCTATGAA 120 Query 121 GAAGCACTTATGATATTAGAACTTATGCCTTATCGAGGATGTTATCCCATTTTTAAATTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GAAGCACTTATGATATTAGAACTTATGCCTTATCGAGGATGTTATCCCATTTTTAAATTG 180 Query 181 GTTTATTCTGCCGCAGCGAACGCTAGTCACAATAAGGGTTTCAAAGAAACCAATTTAGTC 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GTTTATTCTGCTGCAGCGAACGCTAGTCACAATAAGGGTTTCAAAGAAACCAATTTAGTC 240 Query 241 ATTAGTAAAGCTGAGGTGAACCAAGGAAATACTGTGAAAAAATTAAAACCTCGTGCCCGA 300 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 241 ATTAGTAAAGCTGAGGTGAACCAAGGGAATACTGTGAAAAAATTAAAACCTCGTGCCCGA 300 Query 301 GGACGAAGTTACCCAATAAAACGATCCACTTGTCATATAACTATCGTATTGGAAGATATA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 GGACGAAGTTACCCAATAAAACGATCCACTTGTCATATAACTATCGTATTGGAAGATATA 360 Query 361 TCCTTCTATCAACAATATGAAGAATATTTAATGTATTTaaaaaaaCCTGGATGCAGCAAT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TCCTTCTATCAACAATATGAAGAATATTTAATGTATTTAAAAAAACCTGGATGCAGCAAT 420 Query 421 GAAAACAGAAATCTAACATGTTATGATAGATATAGTAGTGGAGGCCTATGGGACAAAAAA 480 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 421 GAAAACAGAAATCTAACATGTTATGATACATATAGTAGTGGAGGCCTATGGGACAAAAAA 480 Query 481 TAA 483 ||| Sbjct 481 TAA 483 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23007239326 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5