BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg315717 Length=960 Score E Sequences producing significant alignments: (Bits) Value AT1G66940.1 | Symbols: | protein kinase-related | chr1:2497302... 1380 0.0 > AT1G66940.1 | Symbols: | protein kinase-related | chr1:24973028-24974791 REVERSE LENGTH=1279 Length=1279 Score = 1380 bits (747), Expect = 0.0 Identities = 882/946 (93%), Gaps = 14/946 (1%) Strand=Plus/Plus Query 1 ATGTACCATCTTCCCACTTCTTGTCTAGTCATATTCTTCCTCCTCTCTTTATTTCACCCT 60 ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 108 ATGTATCATCTTCCCACTTCTTGTCTAGTTATATTCTTCCTCCTCTCCTTATTTCACCCT 167 Query 61 CTTCCTTGTGATTCAAGTAATCAAGGACTTGGCTGGTGTGAGACTTTGTTTCAGTGTGGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 168 CTTCCTTGTGATTCAAGTAATCAAGGACTTGGCTGGTGTGAGACTTTGTTTCAGTGCGGA 227 Query 121 AACATCACCGCTGGTTTTCCCTTCTCGGGAGGGAATCGTCACAAAGATTGCGGGCATCCA 180 ||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct 228 AACATCACCGCTGGTTTCCCCTTCTCGGGTGGGAATCGTCATAAAGAATGCGGTCATCCA 287 Query 181 TCGCTGGAGCTTCACTGCAACAAAAACTACATCACCTCTCTATTCATCTCAAACCAAAAA 240 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 288 TCGCTGGAGCTTCACTGCAACAAAAACAACATCACCTCTTTATTCATCTCAAACCAAAAG 347 Query 241 TACTCTGTTCTCCATATAGATCAAATATCTAACACTCTTACACTTACCAAACAAG-ACCT 299 ||||||||||||| ||||||||||| ||||||||||||||||||| |||||| || |||| Sbjct 348 TACTCTGTTCTCCGTATAGATCAAACATCTAACACTCTTACACTTGCCAAAC-AGAACCT 406 Query 300 TCTAGGTTCTTTTTGCTCCTCTGTATTCACCAACACAACCTTGCCTCCGGAAACTTTCGA 359 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 407 TCTAGGTTCTTTTTGCTCCTCTGTATTCACAAACACAACCTTGCCTCCCGAAACTTTCGA 466 Query 360 GCTTCCACCGACCTATAAGAGCGTCACCATATTCTACCAATGCTCCTCTTTGCTTCCTAA 419 |||| ||| |||||| ||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 467 GCTTTCACGGACCTACAAGAGCGTCACTATATTCTACCAATGCTCCTCTGTGCTTCCTAA 526 Query 420 CCTTTCTAGCTATACATGTCCCGGGATAGGTCCCATCGCAGTGTCTGAAAACCCTGAAAA 479 ||||||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||| Sbjct 527 CCTTTCTAGCTATACATGTCCTGAGATAGGTCCCATCTCAGTGTCTGAAAGCCCTGAAAA 586 Query 480 ACATCCTGAGAGCTGCCGTTCCAGTTTCACCGTGAAGGTTCCTACGAGTTTCGATACAAA 539 | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 587 ATATCCTGAGAGCTGTCGTTCCAGTTTCACCGTGAAGGTTCCCACGAGTTTCGATACAAA 646 Query 540 AGAGAAAGAGTTGAATGTGACCAATTTGGAAAGTGTTTTAAGAAAAGGATTTGAGGTGAA 599 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 647 AGAGAAAGAGTTGAATGTGACCAATTTGGAAAGTGTTTTAAGAAAAGGATTTGAGGTGAC 706 Query 600 GGTGGTGATCAATGAGAATACATGTCAGGAATGTTTATCCTCTCTTGGAAGATGTCATGG 659 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 707 GGTGGTGATCAATGAGAATACATGTCAGGAATGTTTATCCTCTCTTGGAAGATGTCATGT 766 Query 660 CTTCACCGAAAACTTAACACCAGGA-T-----GTCGTCCACCAAGTGATTCTGAGGGTTC 713 ||||| ||||||||||||||||||| | |||||||||||||||| ||||||||||| Sbjct 767 CTTCAACGAAAACTTAACACCAGGAGTTAAATGTCGTCCACCAAGTGACTCTGAGGGTTC 826 Query 714 TTGTGGATATAATCAGACCTCAAGTACGTTCGTATGCTATTGTAAAGACCCGTATAGCCT 773 ||||||||||||||||||||||||||||||| | ||||||||||| || ||||||||||| Sbjct 827 TTGTGGATATAATCAGACCTCAAGTACGTTCCTCTGCTATTGTAAGGATCCGTATAGCCT 886 Query 774 ATCATGCAGTTCTGGCAAATCTTTTGTTGGATGGATAATAGGTGGTGTATTGATCTTGAT 833 |||||||||||| ||||||||| | || ||||||||||||||||||| ||||||||||| Sbjct 887 ATCATGCAGTTCGGGCAAATCTAATATTAGATGGATAATAGGTGGTGTGTTGATCTTGAT 946 Query 834 TCTCATAGG-T--G-T-T-ATTGTTTCCTTGGTGTTTCTTTGCCGATGTTGTCGAGCCAA 887 ||||||| | | | | ||||||||||||||||||||||||| |||||| |||||||| Sbjct 947 ACTCATAGTATCAGGTATTATTGTTTCCTTGGTGTTTCTTTGCCTATGTTGCCGAGCCAA 1006 Query 888 GATTTTGAGAAAGaaaaaaaCATCAGATGCTCTTGAAGTCCCTCCT 933 |||| | |||||||||||| |||||||||||||||||||||||||| Sbjct 1007 GATTGTCAGAAAGAAAAAATCATCAGATGCTCTTGAAGTCCCTCCT 1052 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46968927445 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5