BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg315903 Length=1689 Score E Sequences producing significant alignments: (Bits) Value AT1G68830.1 | Symbols: STN7 | STT7 homolog STN7 | chr1:25872445... 2820 0.0 > AT1G68830.1 | Symbols: STN7 | STT7 homolog STN7 | chr1:25872445-25875550 REVERSE LENGTH=1975 Length=1975 Score = 2820 bits (1527), Expect = 0.0 Identities = 1636/1690 (97%), Gaps = 2/1690 (0%) Strand=Plus/Plus Query 1 ATGGCTACAATATCTCCGGGAGGAGCTTACATCGGAACTCCCTCACCGTTTCTCGGCAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 ATGGCTACAATATCTCCGGGAGGAGCTTACATCGGAACTCCCTCACCGTTTCTCGGCAAA 137 Query 61 AAACTCAAACATTTCTCTTTAACTTCACCAATTTCGACTTCTAAACCAACGGTTAAGCTC 120 |||||||||| ||||||| |||||||||| |||| || || ||||||||||||||||||| Sbjct 138 AAACTCAAACCTTTCTCTCTAACTTCACCGATTTTGAGTTTTAAACCAACGGTTAAGCTC 197 Query 121 AATTCCGA-TTGTCGCGCTCAATTGATCGATACGGTTCACAATCTCTTCATCGGAGTTGG 179 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 198 AATTCC-AGTTGTCGCGCTCAATTGATCGATACGGTTCACAATCTCTTCATCGGAGTTGG 256 Query 180 AGTCGGACTTCCATGTACGGTTATGGAGTGTGGTGATATGATCTATCGCAGTACTTTGCC 239 ||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 257 AGTTGGACTTCCATGTACGGTTATGGAGTGTGGTGATATGATATATCGAAGTACTTTGCC 316 Query 240 GAAATCGAATGGTTTAACGATTACTGCTCCTGGAGTGGCGTTAGCTCTCACTGCTCTCTC 299 |||||| |||||||||||||| |||||||||||||| || ||||||||||||||||| || Sbjct 317 GAAATCTAATGGTTTAACGATCACTGCTCCTGGAGTAGCTTTAGCTCTCACTGCTCTTTC 376 Query 300 GTATCTATGGGCAACACCTGGTGTTGCTCCTGGGTTTTTCGATATGTTTGTTCTTGCTTT 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 377 GTATCTATGGGCAACACCTGGTGTTGCTCCTGGGTTTTTCGATATGTTTGTTCTTGCTTT 436 Query 360 CGTTGAGAGATTGTTTCGACCTACTTTTAGAAAGGATGATTTTGTTGTTGGGAAGAAATT 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 437 TGTTGAGAGATTGTTTCGACCTACTTTTAGAAAGGATGATTTTGTTGTTGGGAAGAAATT 496 Query 420 AGGGGAAGGTTCTTTTGGTGTTGTTTATAAAGTCTCATTATCCAAAAAACGTTTTAATGA 479 |||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||| Sbjct 497 AGGGGAAGGTTCTTTTGGTGTTGTTTATAAAGTCTCATTATCTAAGAAACGTTCTAATGA 556 Query 480 GGAGGGTGAGTTTGTATTGAAGAAGGCGACTGAATATGGTGCGGTGGAAATTTGGATGAA 539 ||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 557 GGAGGGTGAGTATGTATTGAAGAAGGCGACTGAGTATGGTGCGGTGGAGATTTGGATGAA 616 Query 540 TGAGAGGGTTCGAAGAGCTTGTGGGAATAGCTGTGCTGATTTTGTTTATGGATTTCTCGA 599 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 617 CGAGAGGGTTCGAAGAGCTTGTGGGAATAGCTGTGCTGATTTTGTTTATGGATTTCTCGA 676 Query 600 TAAGTCTTCGAAGAAGGGACCTGAGTATTGGCTGTTATGGAAATATGAAGGAGAATCAAC 659 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 TAAGTCTTCAAAGAAGGGACCTGAGTATTGGCTGTTATGGAAATATGAAGGAGAATCAAC 736 Query 660 ACTTGCTGGTTTGATGCAGAGTAAAGAATTCCCTTATAATGTAGAAACTATCATCCTTGG 719 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 737 ACTTGCTGGTTTGATGCAGAGTAAAGAATTTCCTTATAATGTAGAAACTATCATCCTTGG 796 Query 720 GAAAGTACAAGATTTGCCTAAAGGGTTGGAAAGAGAAAACAAAATTATTCAGACTATCAT 779 |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 797 GAAAGTTCAAGACTTGCCTAAAGGGTTGGAACGAGAAAACAAAATTATTCAGACTATCAT 856 Query 780 GAGACAACTCTTGTTTGCATTGGATGGTCTTCACTCAACTGGGATTATCCATAGGGATGT 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 857 GAGACAACTCTTGTTTGCATTGGATGGTCTTCACTCAACTGGGATTATCCATAGGGATGT 916 Query 840 TAAGCCTCAGAACATTATTTTCTCAGAAGGTTCTCGTTCTTTCAAGATTATCGATCTTGG 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 TAAGCCTCAGAACATTATTTTCTCAGAAGGTTCTCGTTCTTTCAAGATTATCGATCTTGG 976 Query 900 AGCTGCAGCTGATTTGAGAGTGGGAATTAACTACATTCCAAAAGAGTTTCTCCTGGATCC 959 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 977 AGCTGCAGCTGATTTGAGAGTGGGAATTAACTACATTCCAAAAGAGTTTCTCCTTGATCC 1036 Query 960 AAGGTATGCAGCACCTGAGCAATACATCATGAGCACACAAACTCCATCTGCACCTTCAGC 1019 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1037 AAGGTATGCAGCACCTGAGCAATACATCATGAGCACCCAAACTCCATCTGCACCTTCAGC 1096 Query 1020 ACCTGTTGCAGCTGCACTTTCCCCTGTCCTGTGGCAGATGAATTTGCCAGATAGGTTCGA 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1097 ACCTGTTGCAGCTGCACTTTCCCCTGTCCTGTGGCAGATGAATTTGCCAGATAGGTTCGA 1156 Query 1080 TATCTATAGCATTGGCCTCATCTTCCTTCAAATGGCATTCCCATCCTTACGAACTGACAG 1139 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1157 TATCTATAGCATTGGCCTCATCTTCCTTCAAATGGCATTCCCATCCTTACGATCTGACAG 1216 Query 1140 CAACCTCATTCAGTTCAACCGCCAGCTGAAAAGATGTGACTATGACTTAACTGCTTGGAG 1199 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1217 CAACCTCATTCAGTTCAACCGCCAGCTGAAAAGATGTGACTATGACTTAACAGCTTGGAG 1276 Query 1200 AAAACTAGTGGAGCCGCGTGCAAGCGCTGATCTCCGTAGAGGGTTCGAGCTAGTAGATCT 1259 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1277 AAAACTAGTGGAGCCTCGTGCAAGCGCTGATCTCCGTAGAGGGTTCGAGCTTGTAGATCT 1336 Query 1260 AGACGGTGGAATCGGATGGGAACTTCTTACATCGATGGTCCGGTACAAAGCAAGACAAAG 1319 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1337 AGACGGTGGAATCGGATGGGAACTTCTAACATCGATGGTCCGGTACAAAGCAAGACAAAG 1396 Query 1320 AATCAGCGCAAAAGCAGCTCTTGCTCACCCATATTTCGATAGACAAGGATTACTTGCGTT 1379 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 1397 AATCAGCGCAAAAGCAGCTCTTGCTCACCCATATTTCGATAGACAAGGATTGCTCGCGTT 1456 Query 1380 GTCGGTCATGCAGAACTTGAGGATGCAGTACTTCAGGGCTACACAACAGGACTACAGTGA 1439 ||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1457 GTCCGTCATGCAAAACTTGAGAATGCAATACTTCAGGGCTACACAACAGGACTACAGTGA 1516 Query 1440 AGCAGCAAATTGGGTGATTCAGTTAATGGCAAAAAATGGGACAGAAAAAGATGGTGGATT 1499 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1517 AGCAGCAAATTGGGTAATACAGTTAATGGCAAAAAATGGGACAGAAAAAGATGGTGGATT 1576 Query 1500 CACAGAAACGCAACTCCAAGAACTCAGGGAGAAAGAGCCTCGAAAGAAGGCGAATGCGCA 1559 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1577 CACAGAAACACAACTCCAAGAACTCAGGGAGAAAGAGCCTCGAAAGAAAGCGAATGCGCA 1636 Query 1560 AAGAAACGCTCTTGCATCAGCACTTAGGCTTCAGAGGAAGCTTGTGAAAACAGTTACTGA 1619 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1637 AAGAAATGCTCTTGCATCAGCACTTAGGCTTCAGAGGAAGCTTGTGAAAACAGTCACTGA 1696 Query 1620 GACTATTGATGAGTTTAGCGATGGCCGAAAGACCGTGTGGTGGAACAGATGGATCCCCAG 1679 ||| || |||||| ||||||||||||| |||||||| ||||||||| ||||||||||||| Sbjct 1697 GACCATAGATGAGATTAGCGATGGCCGCAAGACCGTTTGGTGGAACCGATGGATCCCCAG 1756 Query 1680 AGAGGAGTGA 1689 |||||||||| Sbjct 1757 AGAGGAGTGA 1766 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 83483506335 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5