BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316086 Length=441 Score E Sequences producing significant alignments: (Bits) Value AT1G71000.1 | Symbols: | Chaperone DnaJ-domain superfamily pro... 396 1e-109 > AT1G71000.1 | Symbols: | Chaperone DnaJ-domain superfamily protein | chr1:26769336-26770111 REVERSE LENGTH=498 Length=498 Score = 396 bits (214), Expect = 1e-109 Identities = 240/253 (95%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 1 ATGGAAGGTGGCATTAAGCAAACGTATTACGAGATTCTCGGTGTTGCCGTTGATTCTTCG 60 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGAAGGTGGCATTAGGCAAACGTATTACGAGATTCTCGGTGTTGCCGTTGATTCTTCG 60 Query 61 GCGGAGCAGATACGACGTGCATATCACAAGCTTGCTATGAGATGGCATCCTGACCGGTGG 120 ||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| Sbjct 61 GCGGAGCAGATACGACGAGCATATCACAAGCTTGCTAAGATATGGCATCCTGACCGGTGG 120 Query 121 ACAAAAGATCCTTTTAGGTCTGGTGAAGCTAAACGAAGATTTCAGCAAATTCAAGAAGCT 180 || |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||| Sbjct 121 ACGAAAGATCCTTTTAGATCTGGAGAAGCTAAACGAAGATTCCAGCAGATTCAAGAAGCT 180 Query 181 TATTCAGTTTTGTCGGATGAGAGGAAACGAAGCTTGTACGATGTTGGACTGTATGATTCT 240 |||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||| Sbjct 181 TATTCAGTTTTGTCGGATGAGAGGAAACGAAGCTCGTACGACGTTGGACTCTATGATTCT 240 Query 241 GGTGAAGATGAGG 253 || |||||||||| Sbjct 241 GGAGAAGATGAGG 253 Score = 296 bits (160), Expect = 1e-79 Identities = 185/197 (94%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 245 AAGATGAGGAAAAGCAGTACAGCTTGGATGAGTTGCAGACAATGGTCGATGACATGGTCT 304 |||| ||||||||||| ||||||||||| ||| | ||||||||||||||||||||||||| Sbjct 303 AAGA-GAGGAAAAGCAATACAGCTTGGAAGAGCTACAGACAATGGTCGATGACATGGTCT 361 Query 305 ATGAGTTCCAATCAGAACCATTGTTCCAGAACCAATCAATTCAAATGAATTTCGACTTGA 364 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 362 ATGAGTTCCAATCAGAACCATTGTTCCAGAACCAATCAATGCAAATGAATTTCGACTTGA 421 Query 365 ACCAACCGCCTGATTGGCATTCACAGATGTCTCTGCCGCTTTCAAGCTTTGAGTTCTATC 424 ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 422 ACCAAACGCCTGATTGGCATTCACAGATGTCTCTACCGCTTTCAAGCTTTGAGTTCTATT 481 Query 425 CGCAGAGTAGCTACTGA 441 | || || ||||||||| Sbjct 482 CTCAAAGCAGCTACTGA 498 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20961651333 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5