BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg316268 Length=1986 Score E Sequences producing significant alignments: (Bits) Value AT1G73170.1 | Symbols: | P-loop containing nucleoside triphosp... 3110 0.0 > AT1G73170.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:27511661-27514797 REVERSE LENGTH=2076 Length=2076 Score = 3110 bits (1684), Expect = 0.0 Identities = 1906/2009 (95%), Gaps = 31/2009 (2%) Strand=Plus/Plus Query 1 ATGCTGAGCTTATCACTGAGTAATCATGTTCCTCCATTAACGCTCTTGCGTCATGAACGA 60 ||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| Sbjct 15 ATGCTGAGCTTATCATTGAGTAATCATGTTCCTCCATTAACGCTCTTGAGCCATGAACGA 74 Query 61 AGCTTGAGCTTCCTCAAGCTCCGATGTCGATCGTCTCTTCTCTTTCACCACCTCTTCCAC 120 | || |||||||||||| | ||||||||||| ||||||||||||| ||||||||| Sbjct 75 A----GA--ATCCTCAAGCTCCAAAGTCGATCGTCTATTCTCTTTCACCAACTCTTCCAC 128 Query 121 ACTAAATTCC-T-T-C--TCG-----TT--TC---GTCTTCTTCACCTGGAGTTGTTGCT 165 ||||| |||| | | | ||| || || ||||||||||| ||||||||||||| Sbjct 129 ACTAAGTTCCTTCTCCTGTCGAATTCTTCCTCTTTGTCTTCTTCACATGGAGTTGTTGCT 188 Query 166 ATTTCGGCATCT---TCGTC--TC-CAGTTCCGGAATTAGAAGACGAGGACCACTTCGAT 219 |||||||||||| || || || ||||||||||||||||||||||||||||||||||| Sbjct 189 ATTTCGGCATCTCCGTCTTCAGTCGCAGTTCCGGAATTAGAAGACGAGGACCACTTCGAT 248 Query 220 GACGAATTACGCCGTCTGTTGGCACTGGTACCGGAGGAGATACGCCGGACACTAG-AGAA 278 ||||||||||| ||||| ||||| || ||||||||||||||||||| |||||| | || | Sbjct 249 GACGAATTACGTCGTCTATTGGCGCTCGTACCGGAGGAGATACGCCAGACACT-GAAGGA 307 Query 279 GCACCCTGAAATTAGTGAACTCATAGAGGTAGTGTTGGATTTAGGTCGTAAACCTCTGGC 338 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 308 GCACCCTGAAATTAGTGAACTCATAGAGATAGTGTTGGATTTAGGTCGTAAACCTCTGGC 367 Query 339 GCGATTCCCTTCTGGTGATTTTGTTATCTCCGACGAAGCTGTTAGAGTTAAAGATCTGGA 398 |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 368 GCGATTCCCTTCAGGTGACTTTGTTATCTCCGACGATGCTGTTAGAGTTAAAGATCTGGA 427 Query 399 ATTCGCTGTTTCTCAGGTCGGTGAGTTTACTAATGATAATCGAGCTGGAATCAGCCGGAC 458 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 428 ATTCGCTGTTTCTCAGGTTGGTGAGTTTACTAATGATAATCGAGCTGGAATCAGCCGGAC 487 Query 459 GTTGCATCGGATTAGTGCGATAAGGAATCGGAAGGGAGAAATTATTGGATTAACTTGCCG 518 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 488 GTTGCATCGGATTAGTGCGATAAGGAATCGGAAAGGAGAAATTATTGGATTAACTTGCCG 547 Query 519 TGTTGGTCGATCTGTTAGAGGAAGCGCTAATTTGCTGCGTGATCTTGTTCAAGATGGGAA 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 548 TGTTGGTCGATCTGTTAGAGGAAGCGCTAATTTGCTGCGTGATCTTGTTCAAGATGGGAA 607 Query 579 CTCATTGTTGCTTATTGGTCCACCAGGTGTGGGGAAAACTACAATGATTAGGGAGGTAGC 638 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 608 CTCATTGTTGCTTATTGGTCCTCCAGGTGTGGGGAAAACTACAATGATTAGGGAGGTAGC 667 Query 639 ACGAATGCTAGGAAATGACTATGAGAAGAGAGTAATGATTGTTGATACTTCCAATGAGAT 698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 668 ACGAATGCTAGGAAATGACTATGAGAAGAGAGTAATGATTGTTGATACTTCCAATGAGAT 727 Query 699 TGGTGGGGATGGTGATATACCTCATCCAGGGATCGGTAATGCTAGGCGGATGCAAGTCCC 758 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 728 TGGTGGTGATGGTGATATACCTCATCCAGGGATCGGTAATGCTAGGCGGATGCAAGTCCC 787 Query 759 TAACTCTGACATACAACACAAGGTGCTGATAGAGGCAGTAGAAAACCATATGCCCCAAGT 818 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 788 TAACTCTGACATACAACACAAGGTGCTGATTGAGGCAGTAGAAAACCATATGCCCCAAGT 847 Query 819 GATTGTGATTGATGAGATTGGAACTAAACTTGAAGCGATAGCTGCAAGTACAATAGCAGA 878 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 848 AATTGTGATTGATGAGATTGGAACTAAACTTGAAGCGATAGCTGCAAGTACTATAGCAGA 907 Query 879 ACGTGGAATCCAGTTAGTTGCCACTGCTCATGGAGCCACCATCGAGAATTTGATTAAGAA 938 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 908 ACGTGGAATCCAGTTAGTCGCCACTGCTCATGGAGCCACTATCGAGAATTTGATTAAGAA 967 Query 939 TCCTTCATTAGACCTTCTGGTTGGAGGTGTACAGAGTGTGACTCTTGGAGATGAGGAAGC 998 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 968 TCCTTCATTAGACCTTCTGGTTGGAGGTGTACAGAGTGTAACTCTTGGAGATGAGGAAGC 1027 Query 999 GACCAGAAGAGGTGGCCAGAAGACTGTCCTTGAAAGAAAAGGTCCTCCAACATTTAACTG 1058 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1028 GACCAGAAGAGGTGGCCAGAAGACTGTCCTTGAAAGAAAAGGTCCTTCAACATTTAACTG 1087 Query 1059 TGGTGCAGAAATAGTTTCAAAGACTGAAGTTCGAGTTCATTGTAGTCTTGAAGCAACTGT 1118 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1088 TGGTGCAGAAATAGTTTCAAAGACTGAAGTTCGAGTTCATCGTAGTCTTGAAGCAACTGT 1147 Query 1119 TGATGCTGTTCTCGCAGGTCGCTTACCAAACGTTGAAATCCGCAAAATAAAGTCTCATGG 1178 ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1148 TGATGCTATCCTCGCAGGTCGCTTACCAAACGTTGAAATCCGCAAAATAAAGTCTCATGG 1207 Query 1179 AGTGGAAGTGATTATGGAAAAGGAACCTTTCATCGACGAGACGACTGTGGATAAGAAACA 1238 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct 1208 AGTGGAAGTGATTATGGAGAAGGAACCTTTCATCGACGAGAAGACTGTGGATAAGAAACA 1267 Query 1239 TGAAGAGGAAACATTAGATGTTTCGAAGCTCGCCAAGGAGGAAACTATCTCTGAAGTTCT 1298 ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| || Sbjct 1268 TGAAGAGGAAACATTAGATGTTTCGAAGCTCACCAAGGAGGAAACTGTCTCTGAAGTCCT 1327 Query 1299 TCCAACTAAGGAGATAACTGAAGCAGAATCTTCAGAGCAAGAGACATTGATGTATCTATA 1358 || |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 1328 TCAAACTAAGGAGATAACTGAAGCAGAATCTTCAGAGAAAGATACATTGATGTATCTATA 1387 Query 1359 TGTCTATGGGATTGCAGAATCAACTGTTCTTCAGGCAATAAAACAACTGGAGATGGAAAC 1418 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 1388 TGTCTATGGGATTGCAGAATCAACTGTTCTTCAGGCAATCAAACAACTAGAGATGGAAAC 1447 Query 1419 TGCAGTAGAGTTAACTGACGACATTAGCGAAGCAGAAGCCTTACTTGCATTGCAAGCGAA 1478 ||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||| || Sbjct 1448 TGCGGTAGAGTTAACTGACGACATTAGTGAAGCAGAAGCCTTACTCGCGTTGCAAGCAAA 1507 Query 1479 GATCAGGAAGAATCCCCGGATTAAATCATTAGCTACATCTCACGGTATACCTGTTTATGT 1538 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1508 GATCAGGAAGAATCCCCGGATTAAATCATTTGCTACATCTCACGGTATACCTGTTTATGT 1567 Query 1539 AACAAAGACTAACTCAGGTATTCAAGTGGCCAAGGCGATACGGGCATTGCTAACCGATTA 1598 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct 1568 AACAAAGACTAACTCAGGTATCCAAGTGGCCAAGGCGATACGGGCATTACTAACAGATTA 1627 Query 1599 CGAAGACAGACTCGGAGAGTTTGGATCAGAAGATCGTCTAAAACTATCTGAAAAAATGGA 1658 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1628 CGAAGACGGACTCGGAGAGTTTGGATCAGAAGATCGTCTAAAACTATCTGAAAAAATGGA 1687 Query 1659 CGCCTTAGAGGAAGCGAGATTAGCGATAGAGCGGATAGTGATACCGAAAAAAGAAACAGC 1718 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 1688 CGCCTTAGAAGAAGCGAGATTAGCGATAGAGCGGATAGTGATACCGAAAAAGGAAACAAC 1747 Query 1719 CGATTTACTCCCGAGGCCACCTAGGATTGTATCTCTTCAAGGAAAGCTAGTCAGGAAGTA 1778 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1748 CGATTTACTCCCGAGGCCACCTAGGATTGTGTCTCTTCAAGGAAAGCTAGTCAGGAAGTA 1807 Query 1779 CAATTTACGATCAGAAAGAAAATGGAGAGGGGATGAGATGTATCTAAGGATCCTCCCTTA 1838 ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct 1808 TAATTTACGATCAGAAAGAAAATGGAGAGGGGATGAGATGTATCTACGGATTCTCCCTTA 1867 Query 1839 TGGGACGGAAGAAGACAGAGACGATGGTGAAGATGAAGGAGAGTTTGAAGAAGAGAACGG 1898 | | ||||||||||| |||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1868 TAGCACGGAAGAAGATAGAGACGACCGTGAAGATGAAGGAGAGTTTGGAGAAGCGAACGG 1927 Query 1899 GGAAGAGCTTGACGAGTTCGGTTGT-GCCACCGGCGAGTCTAATGACTCACCCTCTGGCA 1957 |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||| Sbjct 1928 GGAAGAGCTTGACGAGTTAGGTT-TCGCCACCGGCGAGTCTAATGACTCACCCTCTGGCA 1986 Query 1958 TCGATAGGTTACCCCTATTGCCTGACTAG 1986 ||||||||||||| ||||||||||| ||| Sbjct 1987 TCGATAGGTTACCTCTATTGCCTGATTAG 2015 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98393068200 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5