BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg316768
Length=1032
Score E
Sequences producing significant alignments: (Bits) Value
AT1G78680.1 | Symbols: ATGGH2, GGH2 | gamma-glutamyl hydrolase ... 1591 0.0
AT1G78660.1 | Symbols: ATGGH1, GGH1 | gamma-glutamyl hydrolase ... 905 0.0
AT1G78670.1 | Symbols: ATGGH3, GGH3 | gamma-glutamyl hydrolase ... 695 0.0
> AT1G78680.1 | Symbols: ATGGH2, GGH2 | gamma-glutamyl hydrolase
2 | chr1:29593781-29596270 FORWARD LENGTH=1429
Length=1429
Score = 1591 bits (861), Expect = 0.0
Identities = 962/1011 (95%), Gaps = 5/1011 (0%)
Strand=Plus/Plus
Query 23 TACCGTTGGTA---CTATCTCTGC-TTAAGGATAGCATCATAATGGGCAAGTCTGCGGCG 78
||||||||||| |||||||| | ||||||||||||||||||||| |||| ||||| ||
Sbjct 172 TACCGTTGGTAGCTCTATCTCT-CTTTAAGGATAGCATCATAATGGCCAAGGCTGCGACG 230
Query 79 ATTCTCCTCCCTAGTCAAACCGGATTTGATATTTCTCGGAGTCCGGTATGCTCCGCGCCG 138
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 231 ATTCTCCTCCCTAGTCAAACCGGATTTGATATTTCTCGGAGTCCGGTATGCTCTGCTCCG 290
Query 139 GATCCGAACCTCAATTACAGGCCGGTTATTGGGATTCTGAGCCATCCTGGTGACGGTGCG 198
||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct 291 GATCCGAACCTAAATTACAGACCGGTTATTGGTATTCTGAGCCATCCTGGCGACGGTGCG 350
Query 199 TCGGGTCGTTTGAGCAATGCTACAGACGCGTCGTCCATTGCGGCTTCGTATGTGAAATTA 258
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 351 TCAGGTCGTTTGAGCAATGCTACAGACGCGTCCTCCATTGCGGCTTCGTATGTGAAATTA 410
Query 259 GCTGAGTCTGGTGGAGCACGTGTGATCCCACTCATCTATAACGATCCTGAAGAAATTCTC 318
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 411 GCTGAGTCTGGTGGAGCACGTGTGATCCCACTCATCTTTAACGAGCCTGAAGAAATTCTC 470
Query 319 TTTCAGAAGCTAGAATTGGTCAACGGTGTGATACTCACTGGTGGTTGGGCTAAAGAAGGA 378
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 471 TTTCAGAAGCTAGAATTGGTCAACGGTGTGATACTAACTGGTGGTTGGGCTAAAGAAGGA 530
Query 379 TTGTATTTTGAAATCGTCAAGAAAATCTTCAATAAAGTTTTGGAAAGAAATGATGCTGGA 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 TTGTATTTTGAAATCGTCAAGAAAATCTTCAATAAAGTTTTGGAAAGAAATGATGCTGGA 590
Query 439 GAGCATTTTCCTATATACGCTATTTGCCTCGGATTTGAGCTCTTGACAATGATCATAAGT 498
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 591 GAGCATTTTCCTATATACGCTATTTGCCTCGGATTTGAGCTCTTGACAATGATCATAAGC 650
Query 499 CAGAACAGAGACATTTTTGAAAAAATGGATGCAAGAAATTCTGCATCAAGTCTTCAGTTC 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 CAGAACAGAGACATTTTTGAAAAAATGGATGCAAGAAATTCTGCATCAAGTCTTCAGTTC 710
Query 559 CTTGAAAATGTTAATATCCAAGGAACCATTTTCCAAAGATTTCCTCCAGAACTGTTGAAA 618
|||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 711 GTTGAAAATGTTAATATCCAAGGAACCATATTCCAAAGATTTCCTCCAGAGCTGTTGAAA 770
Query 619 AAACTCGGTACAGATTGTTTAGTTATGCAGAACCATCGGTTTGGTATCTCACCAGAAAGC 678
|||||||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||
Sbjct 771 AAACTCGGTACAGATTGTCTGGTTATGCAGAATCATCGGTTTGGTATCTCACCACAAAGC 830
Query 679 TTTGAAGGCAATGTTGCTCTGTCCAGTTTCTTTAAAATCGTCACAACATGCGTTGATAAC 738
|||||||| ||| |||||||||| | |||||||||||| |||||||||||||||||| ||
Sbjct 831 TTTGAAGGAAATATTGCTCTGTCTAATTTCTTTAAAATTGTCACAACATGCGTTGATGAC 890
Query 739 AACAACAAGGTTTATGTTTCAACAGTTCAATCaaaaaaaTATCCAGTGACCGGCTTCCAG 798
||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 891 AACGGCAAGGTTTATGTTTCAACAGTTCAATCAACAAAATATCCAGTGACCGGCTTCCAG 950
Query 799 TGGCATCCCGAGAAAAATGCATTCGAGTGGGGATCATCCAAAATTCCACACTCTGAGGAC 858
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 951 TGGCATCCTGAGAAAAATGCATTCGAGTGGGGATCATCTAAAATTCCACACTCTGAGGAC 1010
Query 859 GCGATCCAGGTGACTCAGCACGCAGCAAATCATCTAGTCAGTGAAGCTAGGAAGTCACTG 918
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1011 GCGATCCAGGTGACTCAGCACGCCGCAAATCATCTAGTCAGTGAAGCTAGGAAGTCACTG 1070
Query 919 AACAGGCCGGACTCTAAGAAAGTGCTGAGTTATCTCATTTATAGCTACAAGCCTACCTAC 978
||||| || || ||||||||||||||||| |||||||||| | ||| |||||||| |||
Sbjct 1071 AACAGACCAGAGTCTAAGAAAGTGCTGAGCAATCTCATTTACAACTATAAGCCTACTTAC 1130
Query 979 TGTGGATACGCAGGGAATGGTTACGACGAGGTTTACATCTTCACACAACAA 1029
|||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1131 TGTGGATACGCAGGGATTGGTTACGACGAGGTTTACATCTTCACACAACAA 1181
> AT1G78660.1 | Symbols: ATGGH1, GGH1 | gamma-glutamyl hydrolase
1 | chr1:29585811-29588302 FORWARD LENGTH=1322
Length=1322
Score = 905 bits (490), Expect = 0.0
Identities = 814/970 (84%), Gaps = 24/970 (2%)
Strand=Plus/Plus
Query 70 TCTGCGGCGATTCTCCTCCCTAGTCAAACCGGATTTGATATTTCTCGGAGTCCGGTATGC 129
|||| | ||||| | ||||||||| || |||||||||| ||||||||||||||| |||
Sbjct 163 TCTGAGTCGATTTTGCTCCCTAGTGAATCCGGATTTGACGGTTCTCGGAGTCCGGTTTGC 222
Query 130 TCCGCGCCGGATCCGAACCTCAATTACAGGCCGGTTATTGGGATTCTGAGCCATCCTGGT 189
||| ||||||||||||||||||| ||||| || || || || || ||||| || |||||
Sbjct 223 TCCTCGCCGGATCCGAACCTCAACTACAGACCTGTCATCGGTATCCTGAGTCACCCTGGA 282
Query 190 GACGGTGCGTCGGGTCGTTTGAGCAATGCTACAGA-CGCGTCGTCCATTGCGGCTTCGTA 248
|| |||||||| ||||| |||| ||||| ||| || | || ||| ||| || ||||||||
Sbjct 283 GATGGTGCGTCTGGTCGGTTGACCAATGATAC-GAGCTCGACGTACATCGCTGCTTCGTA 341
Query 249 TGTGAAATTAGCTGAGTCTGGTGGAGCACGTGTGATCCCACTCATCTATAACGATCCTGA 308
|||||| || |||||| | ||||| || ||||| |||||||||||||| ||||| |||||
Sbjct 342 TGTGAAGTTCGCTGAGGCAGGTGGTGCTCGTGTTATCCCACTCATCTACAACGAACCTGA 401
Query 309 AGAAATTCTCTTTCAGAAGCTAGAATTGGTCAACGGTGTGATACTCACTGGTGGTTGGGC 368
|||| | ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 402 AGAAGTGCTCTTCCAGAAGCTAGAGTTGGTCAACGGTGTGATATTCACTGGTGGTTGGGC 461
Query 369 T-AAAGA-AGGATTGTATTTTGAAATCGTCAAGAAAATCTTCAATAAAGTTTTGGAAAGA 426
| ||| | | || | ||||| || |||||||| |||||||||| ||||| |||||| |||
Sbjct 462 TAAAAAATATGA-T-TATTTCGAGATCGTCAAAAAAATCTTCACTAAAGCTTTGGAGAGA 519
Query 427 AATGATGCTGGAGAGCATTTTCCTA-TATA-CGCTATTTGCCTCGGATTTGAGCTCT-TG 483
||||||||||||||||| ||||| | |||| || |||||||||||||| ||||| | ||
Sbjct 520 AATGATGCTGGAGAGCA-TTTCCCAGTATATGGC-ATTTGCCTCGGATTCGAGCT-TATG 576
Query 484 ACAATGATCATAAGTCAGAACAGAGACATTTTTGAAAAAATGGATGCAAGA-AATTCTGC 542
|||| |||||||||||||||||||||||| |||||| | | ||||| ||| || |||
Sbjct 577 TCAATTATCATAAGTCAGAACAGAGACATTCTTGAAAGATTTGATGC-AGAGGATAATGC 635
Query 543 ATCAAGTCTTCAGTTCCTTGAAAATGTTAATATCCAAGGAACCATT-TTCCAAAGATTTC 601
||||||||| ||||| |||| |||||||||| | | |||| |||| |||||||||||||
Sbjct 636 ATCAAGTCTCCAGTTTGTTGATAATGTTAATAACGATGGAA-CATTATTCCAAAGATTTC 694
Query 602 CTCCAGAACTGTTGAAAAAACTCGGTACAGATTGTTTAGTTATGCAGAACCATC-GGTTT 660
| ||||| |||||||||||||| ||||||||||||| ||||||||||| || | || |
Sbjct 695 CGCCAGAGTTGTTGAAAAAACTCAGTACAGATTGTTTGGTTATGCAGAAACA-CAAGTAT 753
Query 661 GGTATCTCACCAG-AAAGCTTTGAAGGCAATGTTGCTCTGTCCAGTTTCTTT-AAAATCG 718
|||||| |||||| ||| |||| ||| |||| |||| |||| ||||||||| ||| ||
Sbjct 754 GGTATCACACCAGCAAA-CTTTCAAGCCAATCCTGCTTTGTCTAGTTTCTTTGAAATTC- 811
Query 719 TCACAACATGCGTTGAT-AACAACAACAAGGTTTATGTTTCAACAGTTCAATCaaaaaaa 777
||||||| ||| ||||| || |||| |||| |||||||||||| ||| || |||| | |
Sbjct 812 TCACAACCTGCATTGATGAA-AACAGCAAGACTTATGTTTCAACTGTTAAAGCAAAGAGA 870
Query 778 TATCCAGTGACCGGCTTCCAGTGGCATCCCGAGAAAAATGCATTCGAGTGGGGATCATCC 837
|| ||| | || ||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct 871 TACCCAATAACTGGCTTCCAGTGGCATCCTGAGAAAAATGCATTTGAATGGGGATCATCT 930
Query 838 AAAATTCCACACTCTGAGGACGCGATCCAGGTGACTCAGCACGCAGCAAATCATCTAGTC 897
||||||||||||||||| || ||||||||||| ||||| || || | | || |||||
Sbjct 931 GCGATTCCACACTCTGAGGATGCAATCCAGGTGACACAGCATGCTGCTAGTTATTTAGTC 990
Query 898 AGTGAAGCTAGGAAGTCACTGAACAGGCCGGACTCTAAGAAAGTGCTGAGTTATCTCATT 957
|||||||||||||||||||||||||| || || ||| ||||||||||||| ||||||||
Sbjct 991 AGTGAAGCTAGGAAGTCACTGAACAGACCAGAGTCTCAGAAAGTGCTGAGCAATCTCATT 1050
Query 958 TATAGCTACAAGCCTACCTACTGTGGATACGCAGGGAATGGTTACGACGAGGTTTACATC 1017
|| | ||| |||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1051 TACAACTATAAGCCTACTTACTGTGGATACGCAGGGAGGGGTTACGACGAGGTTTACATT 1110
Query 1018 TTCACACAAC 1027
|| |||||||
Sbjct 1111 TTTACACAAC 1120
> AT1G78670.1 | Symbols: ATGGH3, GGH3 | gamma-glutamyl hydrolase
3 | chr1:29590945-29593499 FORWARD LENGTH=1347
Length=1347
Score = 695 bits (376), Expect = 0.0
Identities = 764/946 (81%), Gaps = 47/946 (5%)
Strand=Plus/Plus
Query 118 AGTCCGGTATGCTCCGCGCCGGATCCGAACCTCAATTACAGGCCGGTTATTGGGATTCTG 177
||||| |||||||||||| | ||||| |||||||| |||| |||||| || |||||||||
Sbjct 238 AGTCCTGTATGCTCCGCGGCTGATCCAAACCTCAACTACAAGCCGGTCATCGGGATTCTG 297
Query 178 AGCCATCCTGGTG-A---CG--GTG-CG-TCG-GGTC-GT-T-TGAGCAA-T--G-CTAC 221
| ||| ||||| | | || | | || ||| || | | ||| || | | ||||
Sbjct 298 ACCCACCCTGGCGAAGGTCGATGGGACGCTCGTCTTCACTCTCTGAAAAACTACGCCTAC 357
Query 222 -AGACG--C--GTCGTCCATTGCGGCTTCGTATGTGAAATTAGCTGAGTCTGGTGGAGCA 276
|||| | |||| ||| || |||||||||||||| ||||||||| ||||||||||
Sbjct 358 GCGACGAACATATCGTACATCGCAGCTTCGTATGTGAAGTTAGCTGAGACTGGTGGAGCT 417
Query 277 CGTGTGATCCCACTCATCTATAACGATCCTGAAGAAATTC-TCTTTCAGAAGCTAGAATT 335
|||||||| || || ||||| ||||| |||||||||| || | |||||||||||||||||
Sbjct 418 CGTGTGATTCCTCTTATCTACAACGAGCCTGAAGAAA-TCTTGTTTCAGAAGCTAGAATT 476
Query 336 GGTCAACGGTGTGATACTCACTGGTGGTTGGGCTAAAGA-AGGATTGTATTTTGAAATCG 394
||| || ||||||||| |||| ||||||||||||||| | ||| || |||| || | |
Sbjct 477 GGTAAATGGTGTGATATTCACAGGTGGTTGGGCTAAA-ACAGGGTTATATTACGATGTTG 535
Query 395 TCAAGAAAATCTTCAATAAAGTTTTGGA-AAGAAATGATGCTGGAGAGCATTTTCCTATA 453
| |||||||||||||||||||| |||| || ||||||||||||||| |||||||| |
Sbjct 536 TGGAGAAAATCTTCAATAAAGTTATGGAGAA-AAATGATGCTGGAGAACATTTTCCGGTG 594
Query 454 TACGCTATTTGCCTCGGATTTGAGCTCTTGACAATGATCATAAGTCAGAACAGAGACATT 513
||||| || || || ||||| ||| | ||| |||||||||||||||||||||||||||||
Sbjct 595 TACGCCATGTGTCTTGGATTCGAGATTTTGTCAATGATCATAAGTCAGAACAGAGACATT 654
Query 514 TTTGAAAAAATGGA-TGCAAG-AAATTCTGCATCAAGTCTTCAGTTCCTTGAAAATGTTA 571
|||| | | | | || | ||| | |||||||||||| ||||| || |||| ||||
Sbjct 655 CTTGAGAGGTTTAACT-CA-GTAAACTATGCATCAAGTCTCCAGTTTTTTAAAAACGTTA 712
Query 572 ATATCCAAGGAACCATTTTCCAAAGATTTCCTCCAGAACTGTTGAAAAAACTCGGTACAG 631
||||| ||| |||| | |||||||||||||||||||| ||||||||||| ||| || |||
Sbjct 713 ATATCGAAGCAACCGTGTTCCAAAGATTTCCTCCAGAGCTGTTGAAAAAGCTCAGTGCAG 772
Query 632 ATTGTTTAGTTATGCAGAACCATCGGTTT-GGTATCTCACCAGA-AAGCTTTGAAGGCAA 689
| ||||| |||||||||||||| | ||| |||||||||||||| || |||| |||||||
Sbjct 773 ACTGTTTGGTTATGCAGAACCA-CTATTTTGGTATCTCACCAGACAA-CTTTCAAGGCAA 830
Query 690 TG-TTGCTCTGTCCAGTTTCTTTAAAATCGTCACAAC-ATGCGTTGATAACA-ACAACAA 746
| || |||||| |||||||| || ||||||||||| | ||| ||||| | ||| |||
Sbjct 831 TCCTTA-TCTGTCTAGTTTCTTCAATATCGTCACAACCA-GCGCCGATAA-AGACAGCAA 887
Query 747 GG-TTTATGTTTCAAC-AGTTCAATCaaaaaaaTATCCAGTGACCGGCTTCCAGTGGCAT 804
| ||| ||||||||| | ||| ||||||| ||| || ||||||| |||||| ||||||
Sbjct 888 GACTTT-TGTTTCAACTA-TTCGATCAAAACGATACCCTGTGACCGCCTTCCAATGGCAT 945
Query 805 CCCGAGAAAAATGCATTCGAGTGGGGATCATCCAAAATTCCACACTCTGAGGACGCGATC 864
|| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||| ||
Sbjct 946 CCAGAGAAAAATGCATTCGAATGGGGATCATCTGAAATCCCACACTCTGAGGACGCAATT 1005
Query 865 CAGGTGACTCAGCACGCAGCAAATCATCTAGTCAGTGAAGCTAGGAAGTCACTGAACAGG 924
||||||||||| || || |||||| |||||||||||||||| || |||||| |||||||
Sbjct 1006 CAGGTGACTCAACATGCTGCAAATTATCTAGTCAGTGAAGCCAGAAAGTCAATGAACAGA 1065
Query 925 CCGGACT-CTAAGAAAGTGCTGAGTTATCTCATTTATAGCTACAAGCCTACCTACTGTGG 983
|| || || ||||||||||||| ||||||| || | |||||||||||| |||| ||
Sbjct 1066 CCAT-CTTCTGAGAAAGTGCTGAGCAATCTCATCTACAACTACAAGCCTACGTACTCCGG 1124
Query 984 ATACGCAGGGAATGGTTACGACGAGGTTTACATCTTCACACAACAA 1029
|||| ||||| ||| ||||||||||||| || ||||| |||||
Sbjct 1125 ATACAAAGGGAGCGGTGACGACGAGGTTTATATTTTCACGTAACAA 1170
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50585786029
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5