BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg317971
Length=3348
Score E
Sequences producing significant alignments: (Bits) Value
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |... 5657 0.0
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |... 3731 0.0
> AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13
| chr3:3761388-3770413 REVERSE LENGTH=3841
Length=3841
Score = 5657 bits (3063), Expect = 0.0
Identities = 3255/3350 (97%), Gaps = 4/3350 (0%)
Strand=Plus/Plus
Query 1 ATGACTATGATGACTCCGCCGCCGCTTGATCAGCAGGAAGACGAGGAGATGCTTGTTCCG 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 124 ATGACTATGATGACTCCGCCGCCGCTAGATCAGCAGGAAGACGAGGAGATGCTTGTTCCG 183
Query 61 AATCCGGATTTGGTCGAGGGACCTCAGCCTATGGAAGTTGCCCAAACTGAGCCTGCTGCT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 184 AATCCGGATTTGGTCGAGGGACCTCAGCCTATGGAAGTTGCCCAAACTGATCCTGCTGCT 243
Query 121 ACCGCCGTGGAGAATCCGCCACCCGAGGATCCTCCAACTCTGAAATTCACGTGGACCATC 180
||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 244 ACCGCTGTGGAGAATCCACCACCCGAGGATCCTCCAAGTCTGAAATTCACGTGGACCATC 303
Query 181 CCAATTTTCACTAGGCTCAATACCAGGAAGCATTACTCTGATGTATTTGTTGTTGGCGGT 240
||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 304 CCAATGTTCACTAGGCTCAATACCAGGAAGCATTACTCTGACGTATTTGTTGTAGGCGGT 363
Query 241 TATAAATGGCGTATATTGATTTTTCCCAAAGGAAACAATGTCGACCATTTGTCAATGTAC 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 TATAAGTGGCGTATATTGATTTTTCCCAAAGGAAACAATGTCGACCATTTGTCAATGTAC 423
Query 301 TTGGATGTTGCTGACGCCGCGAATTTGCCGTATGGGTGGAGCAGATATTCACAGTTCAGT 360
|||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 424 TTGGATGTTGCTGATGCTGCGAATTTGCCGTACGGGTGGAGCAGATATTCACAGTTCAGT 483
Query 361 CTGGCTGTAGTGAATCAAGTCAACAACCGATATTCCATCAGAAAGGAGACGCAACATCAA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 CTGGCTGTAGTGAATCAAGTCAACAACCGATATTCCATCAGAAAGGAGACGCAACATCAA 543
Query 421 TTCAATGCAAGAGAAAGCGATTGGGGGTTTACATCATTCATGCCTCTCAGCGAGCTCTAT 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 544 TTCAATGCAAGAGAAAGCGACTGGGGGTTTACATCATTCATGCCTCTCAGCGAGCTCTAT 603
Query 481 GATCCCACTCGAGGATATTTAGTGAATGACATTGTTCTGATTGAAGCTGAAGTTGCTGTG 540
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 604 GAACCCACTCGAGGATATTTAGTGAATGACACTGTTCTGATTGAAGCTGAAGTTGCTGTG 663
Query 541 CGTAAAGTTCTTGATTACTGGTCATATGACTCaaaaaaaGAGACTGGTTTTGTTGGACTA 600
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 664 CGTAAAGTTCTTGATTATTGGTCATATGACTCAAAAAAAGAGACAGGTTTTGTTGGACTA 723
Query 601 AAAAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTGCAGACTTTATACCACATACCT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 724 AAAAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTGCAGACTTTATACCACATACCT 783
Query 661 TACTTCAGAAAGGCTGTGTACCACATGCCAACGACTGAAAATGATGCACCTACTGCTAGT 720
||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 784 TACTTTAGAAAGGCTGTTTACCACATGCCAACGACTGAAAATGATGCACCTACCGCTAGT 843
Query 721 ATCCCATTGGCGCTCCAGAGTTTGTTTTACAAGCTTCAGTATAATGATACCAGTGTAGCG 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 844 ATCCCATTGGCGCTCCAGAGTTTATTTTACAAGCTTCAGTATAATGATACCAGTGTAGCG 903
Query 781 ACAAAGGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCTTTCATGCAACATGAT 840
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 904 ACAAAGGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCTTTTATGCAACATGAT 963
Query 841 GTCCAAGAACTCAACCGAGTTCTCTGTGAAAAGCTTGAGGACAAGATGAAGGGAACTGTT 900
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 GTACAAGAACTCAACAGAGTTCTCTGTGAAAAGCTTGAGGACAAGATGAAGGGAACTGTT 1023
Query 901 GTGGAGGGAACAATACAAAAGCTATTTGAGGGTCACCACATGAATTACATTGAGTGCATT 960
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1024 GTGGAGGGAACAATACAAAAGCTATTTGAAGGTCACCACATGAATTACATTGAGTGCATT 1083
Query 961 AATGTAGATTACAAATCTACACGAAAAGAATCATTCTATGACCTCCAGCTTGATGTCAAA 1020
||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||
Sbjct 1084 AATGTAGATTACAAATCTACACGGAAAGAGTCATTTTATGACCTCCAGCTTGATGTTAAA 1143
Query 1021 GGCTGCAAAGATGTATATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGA 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144 GGCTGCAAAGATGTATATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGA 1203
Query 1081 GACAACAAATACCATGCAGAAGGACATGATTTGCAGGATGCaaaaaaaGGTGTTCTATTC 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1204 GACAACAAATACCATGCAGAAGGACATGATTTGCAGGATGCAAAAAAAGGTGTTCTATTC 1263
Query 1141 ATAGACTTTCCACCAGTTCTTCAACTTCAGCTCAAGAGGTTTGAATACGATTTTATGAGG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1264 ATAGACTTTCCACCAGTTCTTCAACTTCAGCTCAAGAGGTTTGAATACGATTTTATGAGG 1323
Query 1201 GACACAATGGTGAAGATCAATGATCGGTATGAGTTTCCTCTTCAACTGGATCTCGACAGA 1260
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1324 GACACAATGGTGAAGATTAATGATCGGTATGAGTTTCCTCTCCAACTGGATCTCGACAGA 1383
Query 1261 GA-GAATGGAAAATATTTATCCCCTGATGCAGACAAGAGTGTTCGCAATCTCTACACCCT 1319
|| || ||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1384 GAAGA-TGGAAGATATTTATCCCCTGATGCAGACAAGAGTGTCCGCAATCTCTACACCCT 1442
Query 1320 CCACAGTGTCTTGGTTCACAGTGGAGGAGTGCATGGAGGGCATTATTATGCTTTTATTAG 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 CCACAGTGTCTTGGTTCACAGTGGAGGAGTGCATGGAGGGCATTATTATGCTTTTATTAG 1502
Query 1380 GCCAACACTTTCAGATCAGTGGTATAAATTTGATGATGAACGGGTAACGAAGGAAGATGT 1439
||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct 1503 GCCAACACTTTCAGATCAGTGGTATAAATTTGACGATGAACGGGTCACGAAAGAAGATGT 1562
Query 1440 GAAAAGGGCACTGGAAGAGCAATATGGTGGTGAAGAAGAGTTACCGCAGAATAATCCTGG 1499
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1563 CAAAAGAGCACTGGAAGAGCAATATGGTGGTGAAGAAGAGTTACCGCAGAATAATCCTGG 1622
Query 1500 TTTCAATAATCCACCTTTCAAATTCACAAAATACTCGAATGCATACATGCTTGTTTATAT 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 TTTCAATAATCCACCTTTCAAATTCACAAAATACTCGAATGCATACATGCTTGTTTATAT 1682
Query 1560 TCGGGAAAGTGACAAGGACAAGATAATCTGCAACGTTGATGAGAAAGACATTGCGGAACA 1619
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1683 TCGGGAAAGTGACAAGGATAAGATAATCTGCAACGTTGATGAGAAAGACATTGCGGAACA 1742
Query 1620 TTTGCGGGTGAGGCTgaaaaaagaacaagaagaaaaggaagataaaagaaaaTACAAGGC 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1743 TTTGCGGGTGAGGCTGAAAAAAGAACAAGAAGAAAAGGAAGATAAAAGAAAATACAAGGC 1802
Query 1680 TCAAGCTCACCTTTTCACGACAATCAAGGTCGCAAGGGATGATGACATCACTGAGCAAAT 1739
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1803 TCAAGCTCACCTTTTCACGACAATCAAGGTCGCAAGAGATGATGACATCACTGAGCAAAT 1862
Query 1740 TGGAAAGAATATATATTTTGATCTTGTTGATCATGAAAAAGTTCGGAGTTTTCGAATCCA 1799
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1863 TGGAAAGAATATATATTTTGATCTTGTTGATCATGAAAAAGTGAGGAGTTTTCGAATCCA 1922
Query 1800 GAAACAGACCCCCTTTCAACAATTTAAGGAAGAGGTAGCCAAAGAGTTTGGTGTCCCGGT 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1923 GAAACAGACCCCCTTTCAACAATTTAAGGAAGAGGTAGCCAAAGAGTTTGGTGTCCCGGT 1982
Query 1860 TCAACTACAGCGGTTCTGGATCTGGGCAAAGCGTCAAAACCATACTTATCGCCCCAATCG 1919
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1983 TCAACTACAGCGGTTCTGGATCTGGGCAAAGCGTCAAAACCATACTTACCGCCCCAATCG 2042
Query 1920 TCCCCTATTACCTAATGAAGAATTACAGACGGTTGGACAAATAAGAGAGGCATCTAACAA 1979
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2043 TCCCCTATCACCTAATGAAGAATTACAGACGGTTGGACAAATACGAGAGGCATCTAACAA 2102
Query 1980 GGCAAACAATGCTGAACTAAAGCTGTTTTTGGAAATAGAGCGTGGACCGGATGATCTTCC 2039
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2103 GGCAAACAATGCTGAGCTAAAGCTGTTTTTGGAAATAGAGCGTGGACCGGATGACCTTCC 2162
Query 2040 TATTCCTCCCCCAGAAAAATCTTCTGAAGATATCCTTCTTTTCTTTAAACTCTATGACCC 2099
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 2163 TATTCCTCCCCCAGAAAAAACTTCTGAGGATATCCTTCTTTTCTTTAAACTCTATGACCC 2222
Query 2100 TGAGAATGCAGTACTAAGATATGTTGGCAGGCTAATGGTGAAAAGTTCCAGTAAGCCCAT 2159
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2223 TGAGAACGCAGTACTAAGATATGTTGGCAGGCTAATGGTGAAAAGTTCCAGTAAGCCCAT 2282
Query 2160 GGATATAGTAGGGCAACTGAATAAAATGGCTGGTTTTGCTCCTGATGAGGAAATTGACCT 2219
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||
Sbjct 2283 GGATATAGTAGGGCAATTGAATAAAATGGCTGGTTTTGCTCCTGATGAGGAAATAGAACT 2342
Query 2220 TTTTGAGGAAATTAAGTTTGAACCTTGTGTAATGTGTGAACA-ACTGGATAAGAAGACTT 2278
|||||||||||| |||||||||||||| |||||||||||||| | || ||||||||||||
Sbjct 2343 TTTTGAGGAAATAAAGTTTGAACCTTGCGTAATGTGTGAACAGATTG-ATAAGAAGACTT 2401
Query 2279 CTTTCAGGCTGTGTCAAATTGAAGATGGAGATATCATTTGTTATCAGAAACCTCTATCTA 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2402 CTTTCAGGCTGTGTCAAATTGAAGATGGAGATATCATTTGTTATCAGAAACCTCTTTCTA 2461
Query 2339 TCCAGGAGAGTGAATGTCGCTACCCAGATGTGCCATCATTTTTGGAGTATGTACAGAATC 2398
|| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2462 TCGAGGAGAGTGAATTTCGATACCCAGATGTGCCATCATTTTTGGAGTATGTACAGAATC 2521
Query 2399 GAGAGCTGGTGCGTTTTCGTACACTGGAAAAACCAAAAGAAGACGAATTTACTATGGAGC 2458
||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||
Sbjct 2522 GAGAGCTGGTGCGTTTTCGCACACTGGAAAAACCAAAAGAGGATGAGTTTACTATGGAGC 2581
Query 2459 TGTCAAAGCAGCACACTTATGATGATGTTGTGGAAAGAGTGGCTGAGAAGCTTGGCCTTG 2518
||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 2582 TGTCAAAGCTGCACACTTATGATGATGTAGTGGAAAGGGTGGCTGAGAAGCTTGGCCTTG 2641
Query 2519 ATGATCCATCGAAACTTAGACTTACATCTCACAATTGCTACTCCCAGCAACCCAAGCCTC 2578
| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 2642 ACGATCCATCAAAACTTAGGCTTACATCTCACAATTGCTACTCTCAGCAACCCAAGCCTC 2701
Query 2579 AGCCAATCAAATACCGTGGAGTAGATCATCTTTCAGATATGTTAGTTCACTACAATCAGA 2638
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2702 AGCCAATCAAATACCGTGGAGTAGATCATCTTTCAGATATGTTAGTTCACTATAATCAGA 2761
Query 2639 CGTCTGACATTTTGTATTATGAAGTTCTGGATATTCCTCTTCCAGAATTGCAAGGTCTTA 2698
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2762 CGTCTGACATATTGTATTATGAAGTTTTGGATATTCCTCTTCCAGAATTGCAAGGTCTTA 2821
Query 2699 AGACTCTAAAAGTGGCTTTCCATAGTGCCACAAAGGATGAAGTGATAATCCACAATATCA 2758
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2822 AGACTCTAAAAGTAGCTTTCCATAGTGCCACAAAGGATGAAGTGATAATCCACAATATCA 2881
Query 2759 GACTACCTAAGCAGAGTACTGTTGGAGATGTTATTAACGATCTGAAAACAAAGGTGGAGC 2818
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2882 GACTACCTAAGCAGAGTACTGTTGGAGATGTTATTAACGAACTGAAAACAAAGGTGGAGC 2941
Query 2819 TTTCGCATCAAGATGCAGAACTGAGGTTACTTGAGGTCTTTTTCCACAAGATCTACAAGA 2878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2942 TTTCGCATCAAGATGCAGAACTGAGGTTACTTGAGGTCTTTTTCCACAAGATCTACAAGA 3001
Query 2879 TCTTTCCATCTACTGAAAGAATTGAAAACATCAATGACCAGTACTGGACTTTACGAGCAG 2938
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3002 TCTTTCCATCTACTGAACGAATTGAAAACATCAATGACCAGTACTGGACTTTACGAGCAG 3061
Query 2939 AAGAGATACCTGACGAAGAGAAGAATATTGGTCCCAATGATCGGTTAATTCACGTATATC 2998
| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3062 AGGAGATACCTGAAGAAGAGAAGAATATTGGTCCCAATGATAGGTTAATTCACGTATATC 3121
Query 2999 ATTTTACTAAAGAGGCCGGACAAAATCAGCAAGTACAAAATTTTGGGGAACCCTTCTTTT 3058
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3122 ATTTTACTAAAGAGGCCGGACAAAATCAGCAAGTTCAAAATTTTGGGGAACCCTTCTTTT 3181
Query 3059 TGGTAATCCACGAAGGTGAAACTTTAGAAGAAATCAAGATCCGTATCCaaaaaaaaCTCC 3118
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 3182 TGGTAATCCACGAAGGTGAAACTTTAGAAGAAATCAAGACCCGTATCCAAAAGAAACTCC 3241
Query 3119 ATGTCCCTGATGAGGACTTTGCCAAGTGGAAGTTTGCATCTTTTTCATTGGGACGTCCTG 3178
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 3242 ATGTCCCTGATGAGGACTTTGCCAAGTGGAAGTTTGCATCGTTTTCAATGGGACGTCCTG 3301
Query 3179 ATTACTTGCAGGACACAGACGTTGTTTATAATCGCTTTCAGAGAAGAGATGTATACGGCG 3238
||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 3302 ATTACTTGCTGGACACAGATGTTGTTTATAATCGCTTTCAGAGAAGAGATGTATACGGTG 3361
Query 3239 CGTGGGAGCAGTATCTTGGGTTGGAGCACATTGACAATGCTCCTAAAAGGGCTTATGCTG 3298
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3362 CGTGGGAGCAGTATCTTGGGTTGGAGCACATTGATAATGCTCCTAAAAGGGCTTATGCTG 3421
Query 3299 CGAATCAGAACCGACATGCATACGAGAAGCCGGTGAAAATATACAATTAG 3348
| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3422 CAAATCAGAACCGACACGCATACGAGAAGCCGGTGAAAATATACAATTAG 3471
> AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12
| chr5:2019107-2027943 REVERSE LENGTH=3898
Length=3898
Score = 3731 bits (2020), Expect = 0.0
Identities = 2940/3383 (87%), Gaps = 67/3383 (2%)
Strand=Plus/Plus
Query 1 ATGACTATGATGACTCCGCC-GCCGCTTGATCAG-CAGGAAGACGAGGAGATGCTTGTTC 58
|||||||||||||||||||| ||| |||||||| || ||||| |||||||||||||| |
Sbjct 110 ATGACTATGATGACTCCGCCTCCCG-TTGATCAGCCA-GAAGATGAGGAGATGCTTGTGC 167
Query 59 CGAATCCGGATTTGGTCGA-GGGAC--CTCAGCCTATGGAAGTTGCCCAAACTGAGCCTG 115
||||| | ||||||||||| || | ||||||| ||||||||| ||||| | ||| |||
Sbjct 168 CGAATTCAGATTTGGTCGACGGTCCTGCTCAGCCCATGGAAGTTACCCAACCCGAGACTG 227
Query 116 CTGCTACCGCCGTGGAGAATCC-GCCACCCGAGGATCCTCCAACTCTGAAATTCACGTGG 174
|||| | | |||||||| || |||| | ||||||||||| ||||||||||||||||||
Sbjct 228 CTGCGAGTACTGTGGAGAA-CCAGCCAGCTGAGGATCCTCCTACTCTGAAATTCACGTGG 286
Query 175 ACCATCCC-AATTTTCACTAGGCTCAATACCAGGAAGCATTACTCTGATGTATTTGTTGT 233
|| ||||| || |||| |||||| || ||||||||||||||||| ||||||||||| ||
Sbjct 287 ACTATCCCTAA-TTTCTCTAGGCAAAACACCAGGAAGCATTACTCCGATGTATTTGTCGT 345
Query 234 TGGCGGTTATAAATGGCGTATATTGATTTTTCCC-AAAGGAAACAATGTCGACCATTTGT 292
||| ||||| |||||||| ||||| | ||||||| ||||| |||||||| || |||||||
Sbjct 346 TGGAGGTTACAAATGGCGCATATT-AATTTTCCCGAAAGGGAACAATGTTGATCATTTGT 404
Query 293 CAATGTACTTGGATGTTGCTGACGCCGCGAATTTGCCGTATGGGTGGAGCAGATATTCAC 352
| ||||||||||||||| |||| || |||| ||||||||| || |||||||||||| | |
Sbjct 405 CCATGTACTTGGATGTTTCTGATGCTGCGAGTTTGCCGTACGGTTGGAGCAGATATGCTC 464
Query 353 AGTTCAGTCTGGCTGTAGTGAATCAAGTCAACAACC-GATATTCCATCAGAAAGGAGACG 411
||||||||||||||||||| |||||| || || ||| ||||| || | ||||| ||||||
Sbjct 465 AGTTCAGTCTGGCTGTAGTCAATCAAATCCAC-ACCAGATATACCGTTAGAAAAGAGACG 523
Query 412 CAACATCAATTCAATGCAAGAGAAAGCGATTGGGGGTTTACATCATTCATGCCTCTCAGC 471
||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||
Sbjct 524 CAACATCAATTCAATGCTAGAGAAAGCGATTGGGGATTTACATCATTCATGCCACTTAGC 583
Query 472 GAGCTCTATGATCCCACTCGAGGATATTTAGTGAATGACATTGTTCTGATTGAAGCTGAA 531
|| || |||||||| | | ||||||||||||||||||| | |||| || |||||||||||
Sbjct 584 GAACTTTATGATCCTAGTAGAGGATATTTAGTGAATGATACTGTTTTGGTTGAAGCTGAA 643
Query 532 GTTGCTGTGCGTAAAGTTCTTGATTACTGGTCATATGACTCaaaaaaaGAGACTGGTTTT 591
|| ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 644 GTCGCTGTACGTAAGGTTCTTGATTACTGGTCATATGACTCTAAAAAAGAGACTGGTTTT 703
Query 592 GTTGGACTAAAAAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTGCAGACTTTATAC 651
|||||||| || ||||||||||| || || ||||||||||||||||| ||||| |||||
Sbjct 704 GTTGGACTCAAGAACCAAGGTGCAACATGCTACATGAATTCTCTCCTACAGACACTATAC 763
Query 652 CACATACCTTACTTCAGAAAGGCTGTGTACCACATGCCAACGACTGAAAATGATGCACCT 711
|||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 764 CACATACCTTACTTCAGAAAGGCTGTATACCACATGCCAACAACTGAGAATGATGCACCC 823
Query 712 ACTGCTAGTATCCCATTGGCGCTCCAGAGTTTGTTTTACAAGCTTCAGTATAATGATACC 771
|| || ||||| || ||||| ||||| ||||||||||||||||| || || ||||| ||
Sbjct 824 ACAGCAAGTATACCGTTGGCTCTCCAAAGTTTGTTTTACAAGCTCCAATACAATGACACT 883
Query 772 AGTGTAGCGACAAAGGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCTTTCATG 831
||||| || ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 884 AGTGTTGCAACAAAAGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCCTTCATG 943
Query 832 CAACATGATGTCCAAGAACTCAACCGAGTTCTCTGTGAAAAGCTTGAGGACAAGATGAAG 891
|| |||||||| ||||||||||| || |||||||| ||||||||||||||||| ||||||
Sbjct 944 CAGCATGATGTGCAAGAACTCAATCGGGTTCTCTGCGAAAAGCTTGAGGACAAAATGAAG 1003
Query 892 GGAACTGTTGTGGAGGGAACAATACAA-AAGCTATTTGAGGGTCACCACATGAATTACAT 950
||||||||||||||||||||||||||| || || |||||||| ||||| |||||||||||
Sbjct 1004 GGAACTGTTGTGGAGGGAACAATACAACAA-CTTTTTGAGGGCCACCATATGAATTACAT 1062
Query 951 TGAGTGCATTAATGTAGATTACAAATCTACACGAAAAGAATCATTCTATGACCTCCAGCT 1010
||||||||| |||||||||| ||||||||||| ||||||||||| || ||||| |||||
Sbjct 1063 TGAGTGCATAAATGTAGATTTTAAATCTACACGGAAAGAATCATTTTACGACCTTCAGCT 1122
Query 1011 TGATGTCAAAGGCTGCAAAGATGTATATGCTTCTTTTGACAAGTATGTTGAAGTTGAACG 1070
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1123 GGATGTTAAAGGCTGCAAGGATGTTTATGCTTCTTTTGACAAGTATGTTGAAGTTGAACG 1182
Query 1071 CCTTGAAGGAGACAACAAATACCATGCAGAAGGACATGATTTGCAGGATGCaaaaaaaGG 1130
|||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||
Sbjct 1183 TCTTGAAGGAGACAACAAATATCATGCAGAAGGACATGGTTTACAGGATGCAAAAAAAGG 1242
Query 1131 TGTTCTATTCATAGACTTTCCACCAGTTCTTCAACTTCAGCTCAAGAGGTTTGAATACGA 1190
|||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||
Sbjct 1243 TGTTCTTTTCATTGACTTTCCACCGGTTCTTCAACTCCAGCTCAAGAGGTTTGAATATGA 1302
Query 1191 TTTTATGAGGGACACAATGGTGAAGATCAATGATCGGTATGAGTTTCCTCTTCAACTGGA 1250
|||||||||||||| ||||||||||| |||||||||||||||||||| ||| |||||||
Sbjct 1303 CTTTATGAGGGACACCATGGTGAAGATAAATGATCGGTATGAGTTTCCGCTTGAACTGGA 1362
Query 1251 TCTCGACAGAG-AGAATGGAAAATATTTATCCCCTGATGCAGACAAGAGTGTTCGCAATC 1309
||| || |||| || ||||||| ||| | || |||||||| |||| |||||| ||||| |
Sbjct 1363 TCTTGATAGAGAAG-ATGGAAAGTATCTGTCGCCTGATGCTGACAGGAGTGTCCGCAACC 1421
Query 1310 TCTACACCCTCCACAGTGTCTTGGTTCACAGTGGAGGAGTGCATGGAGGGCATTATTATG 1369
| || || || |||||||| || ||||| ||||||||||| ||||| ||||| |||||||
Sbjct 1422 TTTATACTCTTCACAGTGTTTTAGTTCATAGTGGAGGAGTACATGGTGGGCACTATTATG 1481
Query 1370 CTTTTATTAGGCCAACACTTTCAGATCAGTGGTATAAATTTGATGATGAACGGGTAACGA 1429
||||||| ||||| || || |||||||||||||||||||||||||||||||| ||||| |
Sbjct 1482 CTTTTATAAGGCCTACGCTCTCAGATCAGTGGTATAAATTTGATGATGAACGAGTAACCA 1541
Query 1430 AGGAAGATGTGAAAAGGGCACTGGAAGAGCAATATGGTGGTGAAGAAGAGTTACCGCAGA 1489
|||||||| |||||||||| |||| |||||||||||||||||||||||| |||| ||||
Sbjct 1542 AGGAAGATTTGAAAAGGGCTTTGGAGGAGCAATATGGTGGTGAAGAAGAGCTACCACAGA 1601
Query 1490 ATAATCCTGGTTTCAATAAT---CCACCTTTCAAATTCACAAAATACTCGAATGCATACA 1546
||||||||||||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct 1602 CTAATCCTGGTTTCAATAATAACCCTCCTTTCAAATTCACAAAGTACTCGAATGCTTACA 1661
Query 1547 TGCTTGTTTATATTCGGGAAAGTGACAAGGACAAGATAATCTGCAACGTTGATGAGAAAG 1606
||||||| ||||| || ||||||||||| || || |||||||||||||||||||||||||
Sbjct 1662 TGCTTGTATATATCCGAGAAAGTGACAAAGATAAAATAATCTGCAACGTTGATGAGAAAG 1721
Query 1607 ACATTGCGGAACATTTGCGGGTGAGGCTgaaa-aaagaacaagaagaaaaggaagataaa 1665
|||| || |||||||| |||||||||| ||| ||||| |||||||||||||||||||||
Sbjct 1722 ACATAGCAGAACATTTAAGGGTGAGGCT-AAAGAAAGAGCAAGAAGAAAAGGAAGATAAA 1780
Query 1666 agaaaaTACAAGGCTCAAGCTCACCTT-T-TCACGACAATCAAGGTCGCAAGGGATGATG 1723
|||| ||||||||| |||||||| ||| | | || | ||| ||||| ||||| ||||| |
Sbjct 1781 AGAAGATACAAGGCACAAGCTCA-CTTATAT-ACCATAATTAAGGTTGCAAGAGATGAAG 1838
Query 1724 ACATCACTGAGCAAATTGGAAAGAATATATATTTTGATCTTGTTGATCATGAAAAAGTTC 1783
|| | | || |||||||| ||| ||||||||||||||||||| |||||||| |||||||
Sbjct 1839 ACCTTAAGGAACAAATTGGGAAGGATATATATTTTGATCTTGTGGATCATGACAAAGTTC 1898
Query 1784 GGAGTTTTCGAATCCAGAAACAGACCCCCTTTCAACAATTTAAGGAAGAGGTAGCCAAAG 1843
| ||||| || |||||||||||||| || |||||||| |||||||| |||||||| ||||
Sbjct 1899 GCAGTTTCCGTATCCAGAAACAGACACCATTTCAACAGTTTAAGGAGGAGGTAGCAAAAG 1958
Query 1844 AGTTTGGTGTCCCGGTTCAACTACAGCGGTTCTGGATCTGGGCAAAGCGTCAAAACCATA 1903
| |||||||| || ||||| ||||| |||||||||| ||||||||| | ||||||||||
Sbjct 1959 AATTTGGTGTACCTGTTCAGTTACAGAGGTTCTGGATTTGGGCAAAGAGACAAAACCATA 2018
Query 1904 CTTATCGCCCCAATCGTCCCCTATTA--CCT-AATGAAGAATTACAGA-CGGTTGGACAA 1959
| ||||| |||||||| |||| ||| ||| || || |||||||| | |||||||||||
Sbjct 2019 CCTATCGTCCCAATCG-CCCC-CTTACGCCTCAA-GAGGAATTACA-ACCGGTTGGACAA 2074
Query 1960 ATAAGAGAGGCATCTAACAAGGCAAACAATGCTGAACTAAAGCTGTTTTTGGAAATAGAG 2019
||||| || |||||||| |||||||||| ||| ||||| ||||| ||||||||| |||||
Sbjct 2075 ATAAGGGAAGCATCTAATAAGGCAAACACTGCAGAACTCAAGCTTTTTTTGGAAGTAGAG 2134
Query 2020 CGTGGACC-GGA-TGATCTTCCTATTCCTCCCCCAGAAAAATCTTCTGAAGATATCCTTC 2077
| ||| ||| | | | |||||||||||| || |||||||| |||||||| ||||
Sbjct 2135 C----ACCTGGATTTA-CGTCCTATTCCTCCTCCTGAAAAATCAAAAGAAGATATTCTTC 2189
Query 2078 TTTTCTTTAAACTCTATGACCCTGAGAATGCAGTACTAAGATATGTTGGCAGGCTAATGG 2137
||||||| || || |||||||| ||||| |||||| |||| |||| ||||||||| ||||
Sbjct 2190 TTTTCTTCAAGCTTTATGACCCCGAGAAGGCAGTATTAAGCTATGCTGGCAGGCTGATGG 2249
Query 2138 TGAAAAGTTCCAGTAAGCCCATGGATAT-AGTAGGGCAACTGAATAAAATGGCTGGTTTT 2196
||||||||||||||||||| |||||||| | | || |||||||| |||||| ||| |||
Sbjct 2250 TGAAAAGTTCCAGTAAGCCTATGGATATAACT-GGAAAACTGAATGAAATGGTTGGCTTT 2308
Query 2197 GCTCCTGATGAGGAAATTGACCTTTTTGAGGAAATTAAGTTTGAACCTTGTGTAATGTGT 2256
||||||||||| ||||| || |||||||||||||| ||||||||||||||||| |||||
Sbjct 2309 GCTCCTGATGAAGAAATAGAACTTTTTGAGGAAATCAAGTTTGAACCTTGTGTTATGTGC 2368
Query 2257 GAACAAC-TGGATAAGAAGACTTCTTTCAGGCTGTGTCAAATTGAAGATGGAGATATCAT 2315
|||| || |||||||||| ||||| ||||| ||||||||||||||||||||||||||||
Sbjct 2369 GAAC-ACTTGGATAAGAAAACTTCATTCAGATTGTGTCAAATTGAAGATGGAGATATCAT 2427
Query 2316 TTG-TTATCAGAAACCTC-TATCTATCCAGGAGAGTGAATGTCGCTACCCAGATGTGCCA 2373
||| || ||||||||||| | | || | |||||| |||||| | |||||||| ||||||
Sbjct 2428 TTGCTT-TCAGAAACCTCTTGT-TAACAAGGAGATTGAATGCCTCTACCCAGCTGTGCCT 2485
Query 2374 TCATTT-TTGGAGTATGTACAGAATCGAGAGCTGGTGCGTTTTCGTACACTGGAAAAACC 2432
|| ||| || || ||||| |||||| || ||||||| || |||||| | |||||||||||
Sbjct 2486 TCGTTTCTT-GAATATGTCCAGAATAGACAGCTGGTCCGGTTTCGTGCTCTGGAAAAACC 2544
Query 2433 AAAAGAAGACGAATTTACTATGGAGCTGTCAAAGCAGCACACTTATGATGATGTTGTGGA 2492
|||||||| || ||| | ||||| |||| ||||||||||||||||| |||||||||||
Sbjct 2545 TAAAGAAGATGAGTTTGTTCTGGAGTTGTCGAAGCAGCACACTTATGACGATGTTGTGGA 2604
Query 2493 -AAGAGTGGCTGAGAAGCTTGGCCTTGATGATCCATCGAAACTTAGACTTACATCTCACA 2551
|| |||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||
Sbjct 2605 GAA-AGTGGCTGAGAAGCTTGGTCTTGACGATCCATCCAAACTTAGGCTTACATCTCACA 2663
Query 2552 ATTGCTACTCCCAGCAACCCAAGCCTCAGCCAATCAAATACCGTGGAGTAGATCATCTT- 2610
||||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||| ||
Sbjct 2664 ATTGCTATTCCCAGCAACCCAAGCCTCAGCCTATCAAGTACCGTGGAGTAGACCAT-TTG 2722
Query 2611 TCAGATATGTTAGTTCACTACAATCAGACGTCTGACATTTTGTATTATGAAGTTCTGGAT 2670
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2723 TCAGATATGTTAGTTCATTACAATCAGACGTCTGACATTTTGTATTATGAAGTTCTGGAC 2782
Query 2671 ATTCCTCTTCCAGAATTGCAAGGTCTTAAGACTCT-AAAAGTGGCTTTCCAT-AGTGCCA 2728
|| |||||||||||||| ||||||||||| || || |||||| ||||||||| | |||||
Sbjct 2783 ATCCCTCTTCCAGAATTACAAGGTCTTAAAAC-CTTAAAAGTTGCTTTCCATCA-TGCCA 2840
Query 2729 CAAAGGATGAAGTGATAATCCACAATATCAGACTACCTAAGCAGAGTACTGTTGGAGATG 2788
| ||||| |||||| ||||||||||||||||||||||||| || || || || |||||||
Sbjct 2841 CGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAAACAAAGCACGGTCGGAGATG 2900
Query 2789 TTATTAACGATCTGAAAACAAAGGTGGAGCTTTCGCATCAAGATGCAGAACTGAGGTTAC 2848
||||||| || || ||||||||||||||||||||||||| ||||||||||||||| || |
Sbjct 2901 TTATTAATGAACTTAAAACAAAGGTGGAGCTTTCGCATCCAGATGCAGAACTGAGATTGC 2960
Query 2849 TTGAGGTCTTTTTCCACAAGATCTACAAGATCTTTCC-ATCTACTGAAAGAATTGAAAAC 2907
| ||||| |||| |||||||||||||||||| ||||| ||| |||||||||||||| ||
Sbjct 2961 TCGAGGTGTTTTACCACAAGATCTACAAGAT-TTTCCCATCAACTGAAAGAATTGAGAAT 3019
Query 2908 ATCAATGACCAGTACTGGACTTTACGAGCAGAAGAGATACCTGACGAAGAGAAGAATATT 2967
|| |||||||||||||||||||||||||| || ||||| || || |||||||||||||||
Sbjct 3020 ATAAATGACCAGTACTGGACTTTACGAGCTGAGGAGATTCCGGAAGAAGAGAAGAATATT 3079
Query 2968 GGTCCCAATGATCGGTTAATTCACGTATATCATTTTACTAAAGAGGCCGGACAAAATCAG 3027
||||| |||||||| ||||||| || || |||||| | || ||| | |||||||| |||
Sbjct 3080 GGTCCAAATGATCGCTTAATTCTTGTGTACCATTTTGCCAAGGAGACTGGACAAAACCAG 3139
Query 3028 CAAGTACAAAATTTTGGGGAACCCTTCTTTTTGGTAATCCACGAAGGTGAAACT-TTAGA 3086
||||| ||||| ||||| || |||||||| ||||||||||| |||||||||||| || ||
Sbjct 3140 CAAGTGCAAAACTTTGGCGAGCCCTTCTTCTTGGTAATCCATGAAGGTGAAACTCTT-GA 3198
Query 3087 AGAAATCAAGATCCGTATCCaaaaaaaaCTCCATGTCCCTGATGAGGACTTTGCCAAGTG 3146
||||||||||| |||||||||||| || || ||||| ||||||| || |||||||||||
Sbjct 3199 AGAAATCAAGAACCGTATCCAAAAGAAGCTTCATGTATCTGATGAAGATTTTGCCAAGTG 3258
Query 3147 GAAGTTTGCAT-CTTTTTCATTGGGACGTCCTGATTACTTGCAGGACACAGACGTTGTTT 3205
||||||||| | | | | || |||| ||||| || ||||||||||||||||| |||||||
Sbjct 3259 GAAGTTTGCGTTCATGT-CAATGGGGCGTCCAGAGTACTTGCAGGACACAGATGTTGTTT 3317
Query 3206 ATAATCGCTTTCAGAGAAGAGATGTATACGGCGCGTGGGAGCAGTATCTTGGGTTGGAGC 3265
|||||||||| |||||||||||||| || || || | |||||||| || ||||||||||
Sbjct 3318 ATAATCGCTTCCAGAGAAGAGATGTCTATGGTGCTTTTGAGCAGTACCTCGGGTTGGAGC 3377
Query 3266 ACATTGACAATGCTCCTAAAAGGGCTTATGCTGCGAATCAGAACCGACATGCATACGAGA 3325
| ||||| | ||||||| |||||||||||||| || |||||||| ||||| |||||||
Sbjct 3378 ATGCTGACACTACTCCTAAGAGGGCTTATGCTGCAAACCAGAACCGCCATGCTTACGAGA 3437
Query 3326 AGCCGGTGAAAATATACAATTAG 3348
||||||| |||||||||||||||
Sbjct 3438 AGCCGGTAAAAATATACAATTAG 3460
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 166604417703
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5