BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg318458
Length=2574
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16940.1 | Symbols: | calmodulin binding;transcription regu... 3258 0.0
AT4G16150.1 | Symbols: | calmodulin binding;transcription regu... 1096 0.0
> AT3G16940.1 | Symbols: | calmodulin binding;transcription regulators
| chr3:5781775-5786280 FORWARD LENGTH=3017
Length=3017
Score = 3258 bits (1764), Expect = 0.0
Identities = 1931/2012 (96%), Gaps = 10/2012 (0%)
Strand=Plus/Plus
Query 571 GATACCGTTGTTAGAAATCATGATATTAGCCTTCATGATATCAATACGCTTGATTGGGAT 630
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 713 GATACAGTTGTTAGAAATCATGATATTAGCCTTCATGATATCAATACGCTTGATTGGGAT 772
Query 631 GAGCTGCTAGTACCAACCGATCTTAATAACCAATCTGCACCAACCGTAGATGATCTGTCA 690
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 773 GAGCTGCTAGTACCAACCGATCTTAATAACCAATCTGCACCAACCGTAGATAATCTTTCA 832
Query 691 TACTTCACAGAATCGCTCCAAAATGCTGCAAATGGCACTGCAGAGCATGTGAATGCGACA 750
|| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 833 TATTTCACAGAACCGCTCCAAAATGCTGCAAATGGCACTGCAGAGCATGGGAATGCGACA 892
Query 751 GTGGCTGATGGATCTCTTGATGCTTTGCTTAACAATGGTCCACAAAGTCGAGAGAGTTTT 810
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 893 GTGGCTGATGGATCTCTTGATGCTTTGCTTAACGATGGTCCACAAAGTCGAGAGAGTTTT 952
Query 811 GGAAGGTGGATGAATTCATTTATCAGCGAATCTAATGGCTCGCTGGAGGATCCTTCCTTT 870
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 953 GGAAGGTGGATGAATTCATTTATCAGCGAATCTAATGGCTCACTGGAGGATCCTTCCTTT 1012
Query 871 GAACCCATGGTTACGCCTAAGCAGGACCCATTAGCTCCTCAAGCTGTATTTCATTCTCAC 930
||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 1013 GAACCCATGGTTATGCCTAGGCAGGATCCATTAGCTCCTCAAGCTGTATTTCATTCTCAC 1072
Query 931 TCTAACATACCTGAGCAAGTGTTTAACATAACTGATGTTTCACCTTCTTGGGCCTATTCT 990
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 1073 TCTAACATACCTGAGCAAGTGTTTAACATAACCGATGTTTCACCTGCTTGGGCCTATTCT 1132
Query 991 TCAGAGAAAACTAAGATTCTTGTAACTGGGTTCTTGCATGACAGTTATCAACATC---AT 1047
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 1133 TCCGAGAAAACTAAGATTCTGGTAACTGGGTTCTTGCATGACAGTTATCAACATCTCGAA 1192
Query 1048 -G--CAAACCTTTATTGCGTTTGCGGTGACTTTTGTGTCCCTGCAGAATATCTCCAGGCG 1104
| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1193 AGATCAAACCTTTATTGCGTTTGCGGTGACTTTTGTGTCCCTGCGGAATATCTCCAGGCT 1252
Query 1105 GGAGTGTACCGTTGTATCATACCTCCGCACTCACCTGGGATGGTAAACCTCTATCTTAGC 1164
||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1253 GGAGTCTACCGTTGCATCATACCTCCACACTCGCCTGGTATGGTAAACCTCTATCTTAGT 1312
Query 1165 GCAGATGGACACAAACCAATCAGCCAATGTTTCAGGTTTGAACACCGTTCAGTCCCAGTT 1224
||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct 1313 GCAGATGGACACAAACCAATCAGCCAATGTTTCAGATTCGAACACCGTGCAGTCCCAGTT 1372
Query 1225 CTTGATAAGACCGTCCCTGAAGAAAATCAAGAATCCAAATGGGAAGAATTTGAGTTCCAA 1284
||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct 1373 CTTGATAAGACCGTCCCTGAAGACAATCAAGATTCCAAATGGGAAGAGTTTGAGTTCCAA 1432
Query 1285 GT-CAGACTTTCTCATCTTCTGTTTACTTCTTCCAACAAACTCAACGTTCTCTCTAGCAA 1343
|| | |||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1433 GTTC-GACTTTCTCATCTTCTGTTTACGTCTTCCAACAAACTCAACGTTCTCTCCAGCAA 1491
Query 1344 AATCCCACCTTC-TAACCTGCGAGATGCTAAAAAACTCGCTAGCAAAACAAACCATCTCT 1402
|||| ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1492 AATCTCACCT-CATAACCTGCGAGATGCTAAAAAACTCGCTAGCAAAACAAATCATCTCT 1550
Query 1403 TAAACAGCTGGGCTTATCTAATCAAGTCCATCCAGGGGAATAAGGTGTCGTTTGATCAAG 1462
||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 1551 TAAACAGTTGGGCTTATCTAGTCAAGTCCATCCAGGGGAATAAGGTATCGTTTGATCAAG 1610
Query 1463 CGAAAGATCATCTCTTCGAGCTTACTCTGAAGAACAGGCTTAAGGAATGGCTTATGGAGA 1522
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1611 CGAAAGATCATCTCTTCGAGCTTTCTCTGAAGAACAGGCTTAAGGAATGGCTTATGGAGA 1670
Query 1523 AAGTGCTTGAAGGTCGCAACACATTGGATTATGATTCTAAAGGCATCGGTGTGATCCACC 1582
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1671 AAGTGCTTGAAGGTCGCAACACATTGGATTATGATTCTAAAGGCCTCGGCGTGATCCACC 1730
Query 1583 TCTGTGCCATTCTTGGATACACTTGGTCGGTCCAGCTGTTCTCCTTGTCAGGCTTATCGT 1642
||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1731 TCTGTGCCAGTCTTGGATACACTTGGTCAGTCCAGCTGTTCTCATTGTCAGGCTTATCGT 1790
Query 1643 TGAATTTCCGTGATAAACAAGGCTGGACTGCTCTTCATTGGGCAGCATACTACGGAAGGG 1702
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1791 TGAATTTCCGTGATAAACAAGGGTGGACTGCTCTTCATTGGGCAGCATACTACGGAAGGG 1850
Query 1703 AGAAAATGGTGGCTGCTCTTCTCTCTGCTGGGGCGAGACCGAACCTAGTGACAGACTCGA 1762
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1851 AGAAAATGGTGGCTGCTCTTCTCTCTGCTGGGGCAAGACCGAACCTGGTGACAGACTCGA 1910
Query 1763 CGAAGGATAATCTTGGTGGATGCATGGCGGCTGATTTGGCACAGCAAAACGGATATGACG 1822
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1911 CGAAGGATAATCTTGGTGGATGCATGGCAGCTGATTTGGCACAGCAAAACGGATATGACG 1970
Query 1823 GTTTAGCTGCTTATCTTGCTGAGAAATGTTTGATTGCTCAGTTTAGAGACATGAAAATTG 1882
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1971 GTTTAGCTGCTTATCTTGCTGAGAAATGTTTGGTTGCTCAGTTTAGAGACATGAAAATTG 2030
Query 1883 CTGGAAACATCAGTGGTGATCTGGAGGCTTGCAAGGCGGAGATGTTGAACCAAGGCACTC 1942
|||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2031 CTGGAAACATCACTGGCGATCTGGAGGCTTGCAAGGCAGAGATGTTGAACCAAGGCACTC 2090
Query 1943 TCCCGGAAGATGAGCAGAGTCTCAAGGACGCTCTTGCAGCATACAGAACAGCTGCAGAAG 2002
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2091 TACCGGAAGATGAGCAGAGTCTCAAGGATGCTCTTGCAGCATACAGAACAGCTGCAGAAG 2150
Query 2003 CAGCGGCTCGGATTCAGGGTGCGTTTAGGGAAAAAGCGCTGAAGGCAGCACGGTCAAGCG 2062
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2151 CAGCGGCTCGGATTCAAGGTGCGTTTAGGGAAAAAGCGCTAAAGGCAGCACGGTCAAGCG 2210
Query 2063 TGATTCAGTTTGCTAACAAAGAAGAAGAGGCTAAGAGCATAATCGCGGCGATGAAGATTC 2122
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2211 TGATTCAGTTTGCTAACAAAGAAGAAGAGGCCAAGAGCATAATCGCGGCGATGAAGATTC 2270
Query 2123 AGAATGCGTTCCGGAAATATGATACGCGTAGGAAGATAGAAGCCGCTTACCGGATTCAAT 2182
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2271 AGAATGCGTTCCGGAAATATGATACACGTAGGAAGATAGAAGCCGCTTACCGGATTCAAT 2330
Query 2183 GCAGGTTCCAAACTTGGAAAATACGAAGAGAGTATCTGAACATGCGGCGTCAAGCAATTA 2242
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2331 GCAGGTTCCAAACTTGGAAAATACGAAGAGAGTATCTGAACATGCGGCGCCAAGCAATTA 2390
Query 2243 GGATTCAGGCTGCTTTCAGGGGATTACAAGCAAGGAGGCAGTACAAGAAGATTTTATGGT 2302
|||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 2391 GGATCCAGGCTGCTTTCAGGGGATTACAAGCAAGGAGGCAGTACAAGAAGATATTGTGGT 2450
Query 2303 CGGTAGGAGTGTTGGAGAAGGCAGTTTTGAGGTGGAGACAAAAGAGAAAAGGTTTTAGAG 2362
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2451 CGGTAGGAGTATTGGAGAAGGCAGTTTTGAGGTGGAGACAAAAGAGAAAAGGGTTTAGAG 2510
Query 2363 GACTCCAGGTTGCAGCAGAGGAGGATTCTTCTGGTGAGGCACAGGAAGATTTCTACAAGA 2422
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2511 GACTCCAGGTTGCAGCAGAGGAGGATTCTCCTGGTGAGGCACAGGAAGATTTCTACAAGA 2570
Query 2423 CAAGCCAGAGACAAGCAGAGGAAAGGCTCGAGAGATCTGTAGTGCGAGTCCAAGCCATGT 2482
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2571 CAAGCCAGAGACAAGCAGAGGAGAGGCTCGAGAGATCTGTAGTGCGAGTACAAGCCATGT 2630
Query 2483 TCAGGTCTAAGAAGGCTCAAGAGGATTACAGAAGGATGAAACTGACTCATGAAGAAGCTC 2542
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 2631 TCAGGTCTAAGAAGGCTCAACAGGATTACAGAAGGATGAAACTCACTCATGAAGAAGCTC 2690
Query 2543 AGTTGGAGTACGATTGCCTTGAAGACATTTGA 2574
|||||||||||| |||||| ||||| ||||||
Sbjct 2691 AGTTGGAGTACGGTTGCCTGGAAGATATTTGA 2722
Score = 832 bits (450), Expect = 0.0
Identities = 504/531 (95%), Gaps = 0/531 (0%)
Strand=Plus/Plus
Query 1 ATGGACGGCGACGGTTTAGGCAGACTAATCGGCTCGGAGATTCATGGATTCCATACCTTA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 ATGGACGGCGACGGTTTAGGCAGACTAATCGGCTCGGAGATTCATGGATTCCATACCTTA 244
Query 61 CAAGATCTTGATGTCCAGACAATGTTGGAAGAAGCAAAAAGCAGGTGGCTACGGCCAAAC 120
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 245 CAAGATCTTGATGTACAGACAATGTTGGAGGAAGCAAAAAGCAGGTGGCTACGGCCAAAC 304
Query 121 GAGATCCATGCAATCCTCGCTAACCCTATATACTTCACCATCAATGTCAAGCCGGTGAAC 180
|||||||||||||||||| |||||| | ||||||||| |||||||||||||| ||||||
Sbjct 305 GAGATCCATGCAATCCTCTATAACCCGAAATACTTCACTATCAATGTCAAGCCAGTGAAC 364
Query 181 TTACCCAATACTGGCAGAATAATATTGTTCGACCGTAAGATGTTGAGGAACTTCAGAAAG 240
|||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 365 TTACCCAATAGTGGCAGAATTATATTATTCGACCGTAAGATGTTGAGGAACTTCAGAAAG 424
Query 241 GATGGTCATAACTGGAAAAAGAAAAAGGATGGAAGGACTGTTAAGGAGGCTCATGAACAC 300
|||||||||||||||||||||||||||||||||||||| || || |||||||||||||||
Sbjct 425 GATGGTCATAACTGGAAAAAGAAAAAGGATGGAAGGACAGTCAAAGAGGCTCATGAACAC 484
Query 301 CTGAAAGTTGGTGACGAGGAAAGGATTCATGTATACTATGCGCACGGTGAAGATAACACT 360
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 485 CTGAAAGTTGGTAACGAGGAAAGGATTCATGTATACTATGCGCATGGTGAAGATAACACT 544
Query 361 ACCTTTGTTCGAAGGTGTTATTGGTTACTAGATAAGGCTCGAGAGAACATCGTCCTCGTA 420
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 545 ACCTTTGTTCGAAGATGTTATTGGTTACTGGATAAGGCTCGAGAGAACATCGTCCTTGTA 604
Query 421 CATTACCGTGATACACAGGAGGCAGTTACAACATCGGGGGACTCAAACTCTAGTCCAATC 480
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 605 CATTACCGTGATACACAGGAGGCAGCTACAACATCGGGGGACTCAATCTCTAGTCCAATC 664
Query 481 TCCGTCTCTGATCAAGCATTCCCAAATCTCGTGACAGCTGAAGATATTGAT 531
|||||||| || ||| ||||||| |||| |||| |||||||||||||||||
Sbjct 665 TCCGTCTCGGAACAAACATTCCCTAATCGCGTGGCAGCTGAAGATATTGAT 715
> AT4G16150.1 | Symbols: | calmodulin binding;transcription regulators
| chr4:9148059-9153292 FORWARD LENGTH=3182
Length=3182
Score = 1096 bits (593), Expect = 0.0
Identities = 1441/1841 (78%), Gaps = 95/1841 (5%)
Strand=Plus/Plus
Query 768 TGATGCTTTGCTTAACAATGGTCCA-CAAAGTCGA-GAGAGTTTTGGAAGGTGGATGAAT 825
||||||||||||||| || ||| | ||||| | || ||||||||||||||| ||||
Sbjct 1099 TGATGCTTTGCTTAATAACGGT-TATGGAAGTC-AGGATAGTTTTGGAAGGTGGGTGAA- 1155
Query 826 TC-A-TTTATCAGCGAATCTAATGGCT-CGCTGGAGGATCCTTCCTTTGAACCCATG-GT 881
| | || || || || ||| ||| | || | || ||||||||| ||||| | || |
Sbjct 1156 -CAACTTCATTAGTGACTCTCCTGGTTCCG-TCGATGATCCTTCCCTTGAA-GC-TGTAT 1211
Query 882 -TACGCCTAAGCAGGACCCAT-TAGCTCCT-CAAGCTGTATTTCATTCTCACTCTAACAT 938
||| ||| |||||| ||| || ||||| | | ||||||||||||| |||||| ||||
Sbjct 1212 ATACACCTGGGCAGGATTCATCTA-CTCCTCCTA-CTGTATTTCATTCCCACTCTGACAT 1269
Query 939 ACCTGAGCAAGTGTTTAACATAACTGATGTTTCACCTTCTTGGGCCTATTCTTCAGAGAA 998
||| |||||||| || ||||||||||||||||||||| | ||||| ||||| |||||||
Sbjct 1270 ACCGGAGCAAGTATTCAACATAACTGATGTTTCACCTGCCTGGGCGTATTCGACAGAGAA 1329
Query 999 AACTAAGATTCTTGTAACTGGGTTCTTGCATGACAG-TTATCAACA--T--CATG--CAA 1051
||| ||||||||||||||||||||||| || ||||| || ||||| | | | |||
Sbjct 1330 AACAAAGATTCTTGTAACTGGGTTCTTTCACGACAGCTT-CCAACATTTGGGAAGATCAA 1388
Query 1052 ACCTTTAT-TGCGTTTGCGGTGACTTTTGTGTCCCTGCAGAATATCTCCAGGCGGGAGTG 1110
||| | || ||| | || || || || ||||||| || |||| ||||||| ||| ||
Sbjct 1389 ACC-TCATCTGCATATGTGGAGAGTTGCGTGTCCCCGCCGAATTTCTCCAGATGGGGGTT 1447
Query 1111 TACCGTTG-TATCATACCTCCGCACTCACCTGGGATGGTAAACCTCTATCTTAGCG-CAG 1168
|| ||||| | || | ||||| || || |||||| |||| ||||| |||||||| | | |
Sbjct 1448 TATCGTTGCT-TCCTTCCTCCTCAATCTCCTGGGGTGGTGAACCTTTATCTTAGTGTC-G 1505
Query 1169 ATGGACACAAACCAATCAGCCAA-TGTTTCAGGTTTGAACACCGTTCAGTCCCAG-TTCT 1226
||||| ||||||| ||||||||| || ||||| || |||||||| ||||| ||| || |
Sbjct 1506 ATGGAAACAAACCGATCAGCCAATTG-TTCAGCTTCGAACACCGCTCAGT-TCAGTTTAT 1563
Query 1227 TG-ATAAGACCGTCCCTGAAGAAAATCAAG-AATCCAAATGGGAAGAATTTGAGTTCCAA 1284
| | ||| || ||||| |||| | | || || ||| |||||||||||||||||||||
Sbjct 1564 CGAAAAAG-CCATCCCTCAAGACGA-CCAGCTATACAAGTGGGAAGAATTTGAGTTCCAA 1621
Query 1285 GTCAGACTTTCTCATCTTCTGTTTACTTCTTCCAACAAACTCAACGTTCTCTCTAGCAAA 1344
||||||||| ||||||||||||| |||||||| |||||| ||| |||| | |||| |||
Sbjct 1622 GTCAGACTTGCTCATCTTCTGTTCACTTCTTCGAACAAAATCAGCGTTTTAACTAGTAAA 1681
Query 1345 ATCCCACCTTCTAACCTGCGAGATGCTAAAAAACTCGCTAGCAAAACAAAC-CATCTCTT 1403
|| ||||| ||||| | || ||||| |||||||| |||| || | ||||||||
Sbjct 1682 ATATCACCTGAAAACCTTCTTGAGGCTAAGAAACTCGCCAGCAGGACTT-CGCATCTCTT 1740
Query 1404 AAACAGCTGGGCTTATCTAATCAAGTCCATCCAGGGGAATAAGGTGTCGTTTGATCAAGC 1463
||| || ||||||||| |||| ||||| || |||| ||| |||| |||||||||||||
Sbjct 1741 AAATAGTTGGGCTTATTTAATGAAGTCAATTCAGGCAAATGAGGTACCGTTTGATCAAGC 1800
Query 1464 GAAAGATCATCTCTTCGAGCTTACTCTGAAGAACAGGCTTAAGGAATGGCTTATGGAGAA 1523
|| || |||||||| |||||||||||||| || ||||| || || |||||| |||||||
Sbjct 1801 GAGGGACCATCTCTTTGAGCTTACTCTGAAAAATAGGCTGAAAGAGTGGCTTTTGGAGAA 1860
Query 1524 AGTGCTT-GAAGGTCGCAACAC-ATTGGATTATGATTCTAAAGG-CATCGGTGTGATCCA 1580
|| | | ||| |||||||| | ||| ||||| |||||||| | | || ||||||||
Sbjct 1861 GGT-CATCGAAAACCGCAACACTAA-GGAATATGACTCTAAAGGGCTT-GGAGTGATCCA 1917
Query 1581 CCTCTGTGCCATTCTTGGATACACTTGGTCGGTCCAGCTGTTCTCCTTGTCAGGCT-TAT 1639
|||||||||| | || |||||||||||||| ||| || ||||||| | || | |||
Sbjct 1918 CCTCTGTGCCGTCCTAGGATACACTTGGTCAATCCTTCTCTTCTCCTGGGCAAA-TATAT 1976
Query 1640 CGTTGAATTTCCGTGATAAACAAGGCTGGACTGCTCTTCATTGGGCAGCATACTACGGAA 1699
||||| ||||||||||||| || || ||||||||||||||||||||||||||||| ||||
Sbjct 1977 CGTTGGATTTCCGTGATAAGCAGGGTTGGACTGCTCTTCATTGGGCAGCATACTATGGAA 2036
Query 1700 GGGAGAAAATGGTGGCTGCTCTTCTCTCTGCTGGGGCGAGACCGAACCTAGTGACAGACT 1759
||||||||||||||||||||||||| ||||| ||||| || || ||||| |||||||||
Sbjct 2037 GGGAGAAAATGGTGGCTGCTCTTCTATCTGCGGGGGCAAGGCCAAACCTGGTGACAGACC 2096
Query 1760 CGACGAAGGATAATCTT-GGTGGATGCATGGCGGCTGATTTGGCACAGCA-AAACGGATA 1817
| || ||||| | || | || || |||| ||| |||||| ||||||| || ||| || ||
Sbjct 2097 CTACTAAGGA-ATTCCTCGGCGGCTGCACGGCAGCTGATCTGGCACAACAGAAA-GGTTA 2154
Query 1818 TGACGGTTTAGCTGCTTATCTTGCTGAGAAATGT-TTGATTGCTCAGTTTAGAG-ACATG 1875
|||||||||||| |||| |||||||||||||||| ||| | || ||||| | || |||||
Sbjct 2155 TGACGGTTTAGCAGCTTTTCTTGCTGAGAAATGTCTTG-TAGCACAGTTCA-AGGACATG 2212
Query 1876 AAAATTGCTGGAAACATCAGTGGTGATCTGGAGGCT-TGCAAGGCGGAGATGTTG--AA- 1931
||| ||||||||||| ||||| | || || | | |||||| |||| || | ||
Sbjct 2213 CAAACGGCTGGAAACATTAGTGGCAACCTTGAAACCAT-CAAGGCAGAGAAGTCGTCAAA 2271
Query 1932 -CCAAGGCACT-CTCCCGGAAGATGAGCAGAGTCTCAAGGACGCTCTTGCAGCATACAGA 1989
||| || | | | | |||| ||||| || || |||||| |||| || |||||||||
Sbjct 2272 TCCAGGGAA-TGCAAATG-AAGAGGAGCAAAGCCTGAAGGACACTCTAGCGGCATACAGA 2329
Query 1990 ACAGCTGCAGAAGCAGCGGCTCGGATTCAGGGTGCGTTTAGGGAAAAAGCGCTGAAGGCA 2049
|| |||||||| |||||||| ||||||||||| ||||| ||||| | | |||||| |
Sbjct 2330 ACTGCTGCAGAGGCAGCGGCGCGGATTCAGGGAGCGTTCAGGGAGCACGAGCTGAAAGTT 2389
Query 2050 GCACGGTCAAGCGT-GATTCAG-TTTGCTAACAAAGAAGAAGAGGCTAAGAGCATAATCG 2107
| ||||||||| | || || ||||||| ||| |||||||| || || | |||||| |
Sbjct 2390 --A-GGTCAAGCGCAG-TT-AGGTTTGCTAGCAAGGAAGAAGAAGCCAAAAACATAATAG 2444
Query 2108 CGGCGATGAAGATTCAGAATGCGTTCCGGAAATAT-GATACGCGTAGGAAGATAGAAGCC 2166
| ||||||||||||||| | ||||| || || | | || ||||||||||| | ||||
Sbjct 2445 CCGCGATGAAGATTCAGCACGCGTTTCGCAATT-TCGAGGTTCGTAGGAAGATTGCAGCC 2503
Query 2167 GCTTAC-CGGATTCAATGCAGGTTCCAAACTTGGAAAAT-ACGAAGAGAGTATCTGAACA 2224
||| | |||||||| | ||||||||||| |||||||| | | | || | ||||||||
Sbjct 2504 GCTG-CTCGGATTCAGTATAGGTTCCAAACATGGAAAATGAGGCGG-GAATTTCTGAACA 2561
Query 2225 TGCGGC-GTCAAG-CAATTAGGATTCAGGCTGC-TTTCAGGGGATTACAAGCAAGGAGGC 2281
|||| | ||| |||||||||| |||||||| ||| || || || |||| ||| || |
Sbjct 2562 TGCGAAAG--AAGGCAATTAGGATCCAGGCTGCGTTT-AGAGGTTTCCAAGTAAGAAGAC 2618
Query 2282 AGTACAAGAAGATTTTATGGTCGGTAGGAGTG-TTGGAGAAGGCAGTTTTGAGGTGGAGA 2340
||||| |||| || |||||| || ||||| ||| |||||||| || |||| ||||||
Sbjct 2619 AGTACCAGAAAATAACATGGTCAGTGGGAGTTCTTG-AGAAGGCAATTCTGAGATGGAGA 2677
Query 2341 CAAAAGAGAAAAGGTTTTAGAGGACTCCAGGTT-G-CAGCA-GAGGAGGATTCTTCTG-G 2396
| ||||||||||| || ||||| || ||||| | || | || ||| | | |
Sbjct 2678 CTGAAGAGAAAAGGATTCAGAGGCCTTCAGGTAAGTCAACCTGACGAGAAGGAAGG-GAG 2736
Query 2397 TGAGGCACAGGAAGATTTCTACAAGACAAGCCAGAGACAAGCAGAGGAAAGGCTCGAGAG 2456
|||||| ||| |||||||||||||||||||||| |||||| |||||| |||| |||||
Sbjct 2737 TGAGGCGGTGGAGGATTTCTACAAGACAAGCCAGAAACAAGCGGAGGAACGGCTTGAGAG 2796
Query 2457 ATCTGTAGTGCGAGTCCAAGCCATGTTCAGGTCTAAGAAGGCTCAAG-AGGATTACAGAA 2515
|| || || |||||| ||||||||| |||| ||||||||||| | | ||||||||||
Sbjct 2797 GTCAGTGGTTAAAGTCCAGGCCATGTTCCGGTCCAAGAAGGCTCA-GCAAGATTACAGAA 2855
Query 2516 GGATGAAACTGACTCATGAAGAAGCTCAGTTGGAGTACGAT 2556
||||||||||| ||||||||||||||||| ||||||| |||
Sbjct 2856 GGATGAAACTGGCTCATGAAGAAGCTCAGCTGGAGTATGAT 2896
Score = 390 bits (211), Expect = 3e-107
Identities = 350/418 (84%), Gaps = 6/418 (1%)
Strand=Plus/Plus
Query 28 ATCGGCTCGGAGATTCATGGATTCCATACCTTACAAGATCTTGATGTCCAGACAATGTTG 87
|||||||| |||||||||||||||||||| ||||||||||| ||| | || ||||||||
Sbjct 194 ATCGGCTCTGAGATTCATGGATTCCATACTTTACAAGATCTAGATATACAAACAATGTTA 253
Query 88 GAAGAAGCAAAAAGCAGGTGGCTACGGCCAAACGAGATCCATGCAATCCTC-GCTAACCC 146
|| |||||| | || |||||||| || || || ||||||||||| | ||| | |||||
Sbjct 254 GATGAAGCATACAGTAGGTGGCTCCGTCCTAATGAGATCCATGCTCTTCTCTG-TAACCA 312
Query 147 TATATACTTCACCATCAATGTCAAGCCGGTGAACTTACCCAATACTGGCA-GAATAATAT 205
|| || |||||||||||| |||||||| |||||||||||||| | ||| | | || | |
Sbjct 313 TAAATTCTTCACCATCAACGTCAAGCCTGTGAACTTACCCAAAAGTGGTACG-ATTGTGT 371
Query 206 TGTTCGACCGTAAGATGTTGAGGAACTTCAGAAAGGATGGTCATAACTGGAAAAAGAAAA 265
|||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 372 TGTTTGATCGTAAGATGTTGAGGAACTTTAGAAAGGATGGTCATAACTGGAAAAAGAAAA 431
Query 266 AGGATGGAAGGACTGTTAAGGAGGCTCATGAACACCTGAAAGTTGGTGACGAGGAAAGGA 325
||||||||| ||| ||||||| ||||||||||| || ||||||||| | ||||||||||
Sbjct 432 AGGATGGAAAGACAATTAAGGAAGCTCATGAACATCTAAAAGTTGGTAATGAGGAAAGGA 491
Query 326 TTCATGTATACTATGCGCACGGTGAAGATAACACTACCTTTGTTCGAAGGTGTTATTGGT 385
||||||| || ||||| |||||||| |||| | |||| ||||| ||||||||||| ||||
Sbjct 492 TTCATGTTTATTATGCCCACGGTGAGGATACCCCTACATTTGTGCGAAGGTGTTACTGGT 551
Query 386 TACTAGATAAGGCTCGAG-AGAACATCGTCCTCGTACATTACCGTGATACACAGGAGG 442
|| | |||||| ||| || || |||| || || || || || || || ||||| ||||
Sbjct 552 TATTGGATAAGTCTC-AGGAGCACATAGTTCTTGTCCACTATCGCGAGACACATGAGG 608
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127775203821
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5