BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg318977
Length=918
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22460.1 | Symbols: OASA2 | O-acetylserine (thiol) lyase (OA... 1519 0.0
AT4G14880.1 | Symbols: OASA1, OLD3, CYTACS1 | O-acetylserine (t... 577 7e-164
> AT3G22460.1 | Symbols: OASA2 | O-acetylserine (thiol) lyase (OAS-TL)
isoform A2 | chr3:7963537-7965907 FORWARD LENGTH=1157
Length=1157
Score = 1519 bits (822), Expect = 0.0
Identities = 887/919 (97%), Gaps = 2/919 (0%)
Strand=Plus/Plus
Query 1 ATGGCTTCAG-GGACTTCTAAAATCGCTAAAGATGTTACTGAATTAATAGGTAACACTCC 59
|||||||||| || || ||||||||||||||||||| |||||| ||||||| ||||||||
Sbjct 84 ATGGCTTCAGTGG-CTCCTAAAATCGCTAAAGATGTAACTGAACTAATAGGGAACACTCC 142
Query 60 ATTAGTGTATCTAAACAAAGTGGCTAAAGATTGTGTTGGTCATGTTGCTGCTAAGCTTGA 119
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 143 ATTAGTGTATCTAAACAAAGTAGCTAAAGATTGTGTTGGTCATGTTGCTGCTAAGCTTGA 202
Query 120 GATGATGGAACCATGCTCTAGCGTCAAAGACAGGATTGGTTATAGTATGATTGCTGATGC 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 203 GATGATGGAACCATGTTCTAGCGTCAAAGACAGGATTGGTTATAGTATGATTGCTGATGC 262
Query 180 AGAAGCTAAAGGTCTTATTAAACCAGGAGAGAGTGTGTTGATGGAGCCAACAAGTGGGAA 239
|||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 263 AGAAGCTAAAGGACTTATTAAACCGGGAGAGAGTGTGTTGATTGAGCCAACAAGTGGGAA 322
Query 240 TACTGGAGTTGGTTTAGCATTTACTGCAGCTGCAAAGGGTTATAAGCTTGTTATTACAAT 299
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 323 CACTGGAGTTGGTTTAGCATTTACTGCAGCTGCAAAGGGCTATAAGCTTGTTATAACAAT 382
Query 300 GCCAGCTTCAATGAGTGTAGAGAGAAGAATCATTCTCTTAGCTTTTGGAGCTGAGTTGAT 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 GCCAGCTTCAATGAGTATAGAGAGAAGAATCATTCTCTTAGCTTTTGGAGCTGAGTTGAT 442
Query 360 TCTTACTGATCCGGCTAAAGGTATGAAAGGCGCTGTTGCAAAGGCGGAGGAGATTTTGGC 419
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 443 TCTTACTGATCCGGCTAAAGGTATGAAAGGTGCTGTTGCAAAGGCGGAGGAGATTTTGGC 502
Query 420 GAAAACGCCTAACGGTTATATGCTTCAACAGTTTGAGAACCCTGCCAATCCAAAGATCCA 479
|||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 503 GAAAACACCTAATGGTTATATGCTTCAACAGTTTGAGAATCCTGCTAATCCAAAGATCCA 562
Query 480 TTATGAGACTACAGGACCTGAGATATGGAAAGGTGCTGGGAAGTATCTCAAGGAACAGAA 539
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 563 TTATGAGACTACTGGACCTGAGATATGGAAAGGTGCTGGGAAGTATCTCAAGGAACAGAA 622
Query 540 CAAAAACATAAAGCTGTATGGTGTCGAGCCTGTTGAAAGCCCTATTCTTTCCGGTGGAAA 599
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 623 CACAAACATAAAGCTGTATGGTGTCGAGCCTGTTGAAAGCCCTATTCTGTCCGGTGGAAA 682
Query 600 GCCAGGTCCCCACAAAATTCAAGGTATAGGTGCTGGTTTTATTCCAGGCATTTTGGATGT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 683 GCCAGGTCCCCACAAAATTCAAGGTATAGGTGCTGGTTTTATTCCAGGCATTTTGGATGT 742
Query 660 TGATCTTATAGATGAAGTTGTTCAGGTTTCAAGTGATGAATCCATTGACATGGCAAGGCT 719
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 743 TGATCTTATAGATGAAGTTGTTCAGGTTTCAAGTGAAGAATCCATTGACATGGCAAGGCT 802
Query 720 TCTTGCAAAGGAAGAGGGTCTGTTAGTGGGAATCTCATCTGGAGCAGCAGCTGCCGCAGC 779
|||||| | ||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 803 TCTTGCTAGGGAAGAGGGTCTGTTAGTGGGAATCTCATCTGGAGCAGCAGCTACTGCAGC 862
Query 780 AATCAAACTTGCAAAGAGGCCAGAAAATGCTGGGAAGCTTATAGTGGCGGTGTTCCCGAG 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 863 AATCAAACTTGCAAAGAGGCCAGAAAATGCTGGGAAGCTTATAGTGGCGGTGTTTCCGAG 922
Query 840 TTTTGGGGAACGATATCTATCGACTGTACTGTTCGATGCAGCAAGGAAAGAGGCAGAGAC 899
||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 923 TTTCGGGGAAAGATATCTATCGACTGTACTGTTTGATGCAGCAAGGAAAGAGGCAGAGAC 982
Query 900 TATGACCTTTGAGCCCTGA 918
|||||||||||||||||||
Sbjct 983 TATGACCTTTGAGCCCTGA 1001
> AT4G14880.1 | Symbols: OASA1, OLD3, CYTACS1 | O-acetylserine
(thiol) lyase (OAS-TL) isoform A1 | chr4:8517960-8520469 REVERSE
LENGTH=1369
Length=1369
Score = 577 bits (312), Expect = 7e-164
Identities = 436/496 (88%), Gaps = 8/496 (2%)
Strand=Plus/Plus
Query 21 AATCGCTAAAGATGTTACTGAATTAATAGGTAACACTCCATTAGTGTATCTAAACAAAGT 80
||| ||||||||||| |||||||| || || ||||||||||| |||||| | ||||| ||
Sbjct 163 AATTGCTAAAGATGTGACTGAATTGATTGGGAACACTCCATTGGTGTATTTGAACAATGT 222
Query 81 GGCT-AAAGATTGTGTTGGTCATGTTGCTGCTAAGCTTGAGATGATGGAACCATGCTCTA 139
||| || || |||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 223 TGCTGAAGGA-TGTGTTGGTCGTGTTGCTGCTAAGCTTGAGATGATGGAACCGTGCTCTA 281
Query 140 GCGTCAAAGACAGGATTGGTTATAGTATGATTGCTGATGCAGAAGCTAAAGGTCTTATTA 199
||||||||||||||||||||| ||| |||||| ||||||||||| || |||||||| |
Sbjct 282 GCGTCAAAGACAGGATTGGTTTTAGCATGATTTCTGATGCAGAAAAGAAGGGTCTTATCA 341
Query 200 AACCAGGAGAGAGTGTGTTGATGGAGCCAACAAGTGGGAATACTGGAGTTGGTTTAGCAT 259
||||||||||||||||| |||| |||||||||||||| || ||||||||||| |||||||
Sbjct 342 AACCAGGAGAGAGTGTGCTGATTGAGCCAACAAGTGGAAACACTGGAGTTGGGTTAGCAT 401
Query 260 TTACTGCAGCTGC-AAAGGGTTATAAGCTTGTTATTACAATGCCAGCTTCAATGAGTG-T 317
| || |||||||| ||||| | | |||||| ||||||||||||||||||| |||||| |
Sbjct 402 TCACGGCAGCTGCCAAAGGCT-ACAAGCTTATTATTACAATGCCAGCTTCTATGAGTACT 460
Query 318 AGAGAGAAGAATCATTCTCTTAGCTTTTGGAGCTGAGTTGATTCTTA-CTGATCCGGCTA 376
||||||||||||||||||||||||||||||| ||||||| || ||| |||| || ||||
Sbjct 461 -GAGAGAAGAATCATTCTCTTAGCTTTTGGAGTTGAGTTGGTT-TTAACTGACCCAGCTA 518
Query 377 AAGGTATGAAAGGCGCTGTTGCAAAGGCGGAGGAGATTTTGGCGAAAACGCCTAACGGTT 436
| || |||||||| ||| | ||||||||||| ||||||||||||||||| || || ||||
Sbjct 519 AGGGCATGAAAGGAGCTATCGCAAAGGCGGAAGAGATTTTGGCGAAAACACCCAATGGTT 578
Query 437 ATATGCTTCAACAGTTTGAGAACCCTGCCAATCCAAAGATCCATTATGAGACTACAGGAC 496
| |||||||| |||||||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct 579 ACATGCTTCAGCAGTTTGAGAACCCTGCCAACCCTAAGATCCACTATGAGACTACGGGAC 638
Query 497 CTGAGATATGGAAAGG 512
||||||||||||||||
Sbjct 639 CTGAGATATGGAAAGG 654
Score = 396 bits (214), Expect = 2e-109
Identities = 345/408 (85%), Gaps = 10/408 (2%)
Strand=Plus/Plus
Query 510 AGGTGCTGGGAAGTATCTCAAGGAACAGAACAAAAACATAAAGCTGTATGGTGTCGAGCC 569
|||||||||||||||||| || ||||||||| |||| | ||||||||||| || |||||
Sbjct 712 AGGTGCTGGGAAGTATCTTAAAGAACAGAACGCAAACGTCAAGCTGTATGGAGTGGAGCC 771
Query 570 TGTTGAAAGCCCTATTCTTTCCGGTGGAAAGCCAGGTCCCCACAAAATTCAAGGTATAGG 629
|||||||| ||||||| |||||||| ||||||||||| ||||| |||||||| |||||
Sbjct 772 AGTTGAAAGTGCTATTCTATCCGGTGGGAAGCCAGGTCCTCACAAGATTCAAGGGATAGG 831
Query 630 TGCTGGTTTTATTCCAGGCATTTTGGATGTTGATCTTATAGATGAAGTTGTTCAGGTTTC 689
||||||||||| ||| | | ||| ||||||||||||| || |||||||||||||||||
Sbjct 832 AGCTGGTTTTATACCAAGTGTATTGAATGTTGATCTTATTGACGAAGTTGTTCAGGTTTC 891
Query 690 AAGTGATGAATCCATTGACATGGCAAGGCTTCTTGCAAAGGAAGAGGGTCTG-TTAGTGG 748
||||||||||||||||||||||||||||| ||||| |||| ||||| || ||||
Sbjct 892 AAGTGATGAATCCATTGACATGGCAAGGCAGCTTGCTCTTAAAGAAGGTCTTCTT-GTGG 950
Query 749 GAATCTCATCTGGAGCAGCAGCTGCCGCAGCAATCAAACTTGCAAAGAGGCCAGAAAATG 808
|||| ||||| || ||||||||||| |||||||| ||||||||| ||||||||||||| |
Sbjct 951 GAATATCATCCGGTGCAGCAGCTGCTGCAGCAATTAAACTTGCACAGAGGCCAGAAAACG 1010
Query 809 CTGGGAAGCT-TATAGTGGCGGTGTTCCCGAGTTTTGGGGA-ACGATATCTATCGACTGT 866
|||||||||| | | |||||| | ||||||||||| ||||| | | |||||||| || ||
Sbjct 1011 CTGGGAAGCTATTT-GTGGCGATATTCCCGAGTTTCGGGGAGAGG-TATCTATCAACGGT 1068
Query 867 ACTGTTCGATGC-AGCAAGGAAAGAGGCAGA-GACTATGACCTTTGAG 912
||| |||||||| | |||||||||| || || | | |||||||| |||
Sbjct 1069 ACTTTTCGATGCGA-CAAGGAAAGAAGCGGAAGCC-ATGACCTTCGAG 1114
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44859093271
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5