BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg319692 Length=1146 Score E Sequences producing significant alignments: (Bits) Value AT2G17420.1 | Symbols: NTRA, ATNTRA, NTR2 | NADPH-dependent thi... 1808 0.0 AT4G35460.1 | Symbols: ATNTRB, NTRB, NTR1 | NADPH-dependent thi... 963 0.0 > AT2G17420.1 | Symbols: NTRA, ATNTRA, NTR2 | NADPH-dependent thioredoxin reductase A | chr2:7564345-7566539 FORWARD LENGTH=1469 Length=1469 Score = 1808 bits (979), Expect = 0.0 Identities = 1096/1151 (95%), Gaps = 14/1151 (1%) Strand=Plus/Plus Query 4 TGTTGGATCTCAATGAGCCAGTCAAGATTCATAATAAAGTCTTTATTAAGCACAGCTGGA 63 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct 1 TGTTGGATCTCAATGAGCCAGTCAAGATTCATTATAAAGTCTTTATTTAGCACAGCAGGA 60 Query 64 GGTTTCTTACTTGGATCTGCTCTCTCAAATCCGCCGTCTCTAGCCACCGCGTTTTCTTC- 122 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GGTTTCTTACTTGGATCTGCTCTCTCAAATCCGCCGTCTCTAGCCACCGCGTTTTCTTCT 120 Query 123 -C-T-C-C-TCCTCCT---CCACCACCGCCGTCGACATGGAAACTCACAAAACCAAGGTC 174 | | | | ||||||| || || |||||||||||||||||||||||||||||||||| Sbjct 121 TCTTCCTCGTCCTCCTCCGCCGCCGCCGCCGTCGACATGGAAACTCACAAAACCAAGGTT 180 Query 175 TGCATCGTCGGAAGTGGACCAGCAGCACACACGGCGGCGATCTATGCATCTAGAGCTGAG 234 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 181 TGCATCGTCGGAAGTGGACCAGCAGCACACACGGCGGCGATCTATGCATCGAGAGCGGAG 240 Query 235 CTTAAGCCTCTTCTCTTCGAAGGATGGATGGCTAACGATATCGCCCCCGGCGGTCAATTA 294 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 241 CTTAAGCCTCTTCTCTTCGAAGGATGGATGGCTAACGACATCGCTCCCGGCGGTCAATTA 300 Query 295 ACAACAACCACCGACGTCGAGAACTTCCCTGGATTCCCTGAAGGTATCCTCGGTGCTGAG 354 || ||||| ||||||||||| ||||||||||| |||||||||||||| |||||| ||| Sbjct 301 ACTACAACAACCGACGTCGAAAACTTCCCTGGGTTCCCTGAAGGTATTCTCGGTATTGAT 360 Query 355 ATCGTTGAGAAATTCAGAAAACAATCGGAGAGATTCGGTACTAAGATCTTCACGGAAACT 414 ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| Sbjct 361 ATCGTTGAGAAATTCAGAAAACAATCGGAGAGATTTGGAACTACGATCTTCACGGAAACT 420 Query 415 GTTAACAAAGTTGATTTCTCATCGAAACCGTTTAAGCTATTCACTGATTCGAGAACTGTT 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GTTAACAAAGTTGATTTCTCATCGAAACCGTTTAAGCTATTCACTGATTCGAGAACTGTT 480 Query 475 CTCGCTGATTCTGTAATCATTTCTACTGGAGCTGTTGCTAAACGTCTTAGCTTCACTGGA 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 CTCGCTGATTCTGTAATCATTTCTACTGGAGCTGTTGCTAAACGTCTTAGCTTCACTGGA 540 Query 535 TCTGGTGAAGGTAACGGTGGTTTTTGGAATCGTGGTATCTCCGCTTGTGCTGTTTGCGAC 594 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TCTGGTGAAGGTAATGGTGGTTTTTGGAATCGTGGTATCTCCGCTTGTGCTGTTTGCGAC 600 Query 595 GGAGCTGCTCCGATTTTTAGGAATAAGCCT-TTGGTTGTTATTGGTGGTGGTGATTCGGC 653 |||||||||||||||||||||||||||||| || || |||||||||||||||||||| || Sbjct 601 GGAGCTGCTCCGATTTTTAGGAATAAGCCTCTT-GTGGTTATTGGTGGTGGTGATTCAGC 659 Query 654 TATGGAGGAAGCTAATTTCCTCACTAAGTATGGATCTAAGGTTTATATAATCCATAGGAG 713 |||||||||||| ||||| || |||||||||||||||||||||||||| || |||||||| Sbjct 660 TATGGAGGAAGCGAATTTTCTGACTAAGTATGGATCTAAGGTTTATATTATTCATAGGAG 719 Query 714 GGATACGTTTAGGGCGTCTAAGATTATGCAGCAGAGAGCTTTGTCTAACCCTAAGATTGA 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 GGATACGTTTAGGGCGTCTAAGATTATGCAGCAGAGAGCTTTGTCTAACCCTAAGATTGA 779 Query 774 AGTGATTTGGAACTCTGCGGTGGTGGAGGCTTATGGAGATGAAAATGGCAAAGGTGTTCT 833 |||||||||||||||||| ||||| ||||| ||||| ||||||||||| | ||||||| Sbjct 780 AGTGATTTGGAACTCTGCCGTGGTTGAGGCGTATGGTGATGAAAATGG---ACGTGTTCT 836 Query 834 TGGAGGATTGAAGGTGAAGAATGTTGTTACTGGAGTTGTTTCAGATTTGAAGGTGTCTGG 893 ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| Sbjct 837 TGGAGGATTGAAGGTGAAGAATGTTGTTACTGGGGATGTTTCAGATCTGAAGGTGTCTGG 896 Query 894 ATTGTTCTTTGCTATTGGTCATGAGCCAGCTACGAAGTTTTTGGATGGGCAGCTTGAGCT 953 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 ATTGTTCTTTGCTATTGGTCATGAGCCAGCTACGAAGTTTTTGGATGGGCAGCTTGAGCT 956 Query 954 TGATGAAGATGGTTATGTTGTGACTAAGCCTGGTACTACTAAGACGAGCGTGGTTGGTGT 1013 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 957 TGATGAAGATGGTTATGTTGTGACCAAGCCAGGTACTACTAAGACGAGCGTGGTTGGTGT 1016 Query 1014 ATTTGCTGCTGGAGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAAC 1073 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1017 ATTTGCTGCTGGAGATGTTCAAGACAAGAAGTATAGACAGGCCATCACTGCTGCAGGAAC 1076 Query 1074 TGGGTGCATGGCGGCTTTGGACGCAGAGCATTACTTACAAGAGATTGGATCTCAGGAGGG 1133 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1077 TGGGTGCATGGCGGCATTGGATGCAGAGCATTACTTACAAGAGATTGGATCTCAGGAGGG 1136 Query 1134 TAAGAGTGATT 1144 ||||||||||| Sbjct 1137 TAAGAGTGATT 1147 > AT4G35460.1 | Symbols: ATNTRB, NTRB, NTR1 | NADPH-dependent thioredoxin reductase B | chr4:16842188-16844082 FORWARD LENGTH=1500 Length=1500 Score = 963 bits (521), Expect = 0.0 Identities = 851/1007 (85%), Gaps = 35/1007 (3%) Strand=Plus/Plus Query 154 GAAACTCACAAAACCAAGG-TCTGCATCGTCGGAAGTGGACCAGCAGCACACACGGCGGC 212 ||||||||||| | ||||| |||| ||||| |||||||| ||||| |||||||||||||| Sbjct 169 GAAACTCACAACA-CAAGGCTCTGTATCGTAGGAAGTGGCCCAGCGGCACACACGGCGGC 227 Query 213 GATCTATGCATCTAGAGCTGAGCTTAAGCCTCTTCTCTTCGAAGGATGGATGGCTAACGA 272 ||| || ||| |||| ||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 228 GATTTACGCAGCTAGGGCTGAACTTAAACCTCTTCTCTTCGAAGGATGGATGGCTAACGA 287 Query 273 TATCGCCCCCGGCGGTCAATTAACAACAACCACCGACGTCGAGAACTTCCCTGGATTCCC 332 ||||| ||||| |||||| ||||||| ||||||||||||||||| ||||| ||||| || Sbjct 288 CATCGCTCCCGGTGGTCAACTAACAACCACCACCGACGTCGAGAATTTCCCCGGATTTCC 347 Query 333 TGAAGGTATCCTCGGTGCT-GAGATCGTTGAGAAATTCAGAAAACAATCGGAGAGATTCG 391 |||||||| ||||| | | ||| || ||| |||||| | |||||||||||| |||||| Sbjct 348 AGAAGGTATTCTCGGAG-TAGAGCTCACTGACAAATTCCGTAAACAATCGGAGCGATTCG 406 Query 392 GTACTAAGATCTTCACGGAAACTGTTAAC-AAAGTTGATTTCTCATCGAAACCGTTTAAG 450 |||||| ||| || || || || | | || ||||| |||||||| ||||||||||||||| Sbjct 407 GTACTACGATATTTACAGAGAC-GGTGACGAAAGTCGATTTCTCTTCGAAACCGTTTAAG 465 Query 451 CTATTCACTGATTCGAGAA-CTGTTCTCGCTGATTCTGT-AATCATTTCTACTGGAGCTG 508 |||||||| ||||| | || | |||||||||| |||| | || | |||||||||||| Sbjct 466 CTATTCACAGATTC-AAAAGCCATTCTCGCTGACGCTGTGATTC-TCGCTACTGGAGCTG 523 Query 509 TTGCTAAACGTCTTAGCTTCACTGGATCTGGTGAAGGTAAC-GGTGGTTTTTGGAATCGT 567 | ||||| || ||||||||| |||||||||||||| | | || ||||| ||||| ||| Sbjct 524 TGGCTAAGCGGCTTAGCTTCGTTGGATCTGGTGAAGCT-TCTGGAGGTTTCTGGAACCGT 582 Query 568 GGTATCTCCGCTTGTGCTGTTTGCGACGGAGCTGCTCCGATTTTTAGGAATAAGCCT-TT 626 || |||||||||||||||||||||||||||||||||||||| || | || || ||| || Sbjct 583 GGAATCTCCGCTTGTGCTGTTTGCGACGGAGCTGCTCCGATATTCCGTAACAAACCTCTT 642 Query 627 G-GTTGTTATTGGTGGTGGTGATTCGGCTATGGAGGAAGCTAA-TTTCCTCACTAAGTAT 684 | | || || ||||| || ||||| || ||||| ||||| || |||| | || || ||| Sbjct 643 GCGGTG--ATCGGTGGAGGCGATTCAGCAATGGAAGAAGCAAACTTTCTT-ACAAAATAT 699 Query 685 GGATCTAAGGTTTATATAATCCATAGGAGGGATACGTTTAGGGCGTCTAAGATTATGCAG 744 |||||||| || ||||||||||||||||| ||| | ||||| |||||||||||||||||| Sbjct 700 GGATCTAAAGTGTATATAATCCATAGGAGAGATGCTTTTAGAGCGTCTAAGATTATGCAG 759 Query 745 CAGAGAGCTTTGTCTAACCCTAAGATTGAAGTGATTTGGAACTC-TGCGGTGGTGGAGGC 803 ||| ||||||||||||| ||||||||||| |||||||||||||| | | || ||||| || Sbjct 760 CAGCGAGCTTTGTCTAATCCTAAGATTGATGTGATTTGGAACTCGT-CTGTTGTGGAAGC 818 Query 804 TTATGGAGATG-A-AAATGGCAAAGGTGTTCTTGGAGGATTGAAGGTGAAGAATGTTGTT 861 ||||||||||| | ||| | | | ||| |||||||||||||| ||||||||||| ||| Sbjct 819 TTATGGAGATGGAGAAA-G--AGATGTG--CTTGGAGGATTGAAAGTGAAGAATGTGGTT 873 Query 862 ACTGGAGTTGTTTCAGATTTGAAGGTGTCTGGATTGTTCTTTGCTATTGGTCATGAGCCA 921 || |||| |||||| ||||| || || ||||||||||||||||||||||||||||||||| Sbjct 874 ACCGGAGATGTTTCTGATTTAAAAGTTTCTGGATTGTTCTTTGCTATTGGTCATGAGCCA 933 Query 922 GCTACGAAGTTTTTGGATGG-GCAGCTTGAGCTT-GATGAAGATGGTTATGTTGTGACTA 979 ||||| |||||||||||||| | | ||||| || ||| |||||||||||||| || | Sbjct 934 GCTACCAAGTTTTTGGATGGTGGTG-TTGAG-TTAGATTCGGATGGTTATGTTGTCACGA 991 Query 980 AGCCTGGTACTACTA-AGACGAGCGTGGTTGGTGTATTT-GCTGCTGGAGATGTTCAAGA 1037 ||||||||||||| | |||| ||||| || || ||| ||||| || |||||||| || Sbjct 992 AGCCTGGTACTAC-ACAGACTAGCGTTCCCGGAGT-TTTCGCTGCGGGTGATGTTCAGGA 1049 Query 1038 CAAGAAGTATAGACAGGCCATCACTGCTGCAGGAACTGGGTGCATGGCGGCTTTGGACGC 1097 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || Sbjct 1050 TAAGAAGTATAGGCAAGCCATCACTGCTGCAGGAACTGGGTGCATGGCAGCTTTGGATGC 1109 Query 1098 AGAGCATTACTTACAAGAGATTGGATCTCAGGAGGGTAAGAGTGATT 1144 ||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 1110 AGAGCATTACTTACAAGAGATTGGATCTCAGCAAGGTAAGAGTGATT 1156 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 56224610400 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5