BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg319804
Length=1335
Score E
Sequences producing significant alignments: (Bits) Value
AT2G18560.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1620 0.0
AT2G18570.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1110 0.0
> AT2G18560.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr2:8059288-8061056 FORWARD LENGTH=1769
Length=1769
Score = 1620 bits (877), Expect = 0.0
Identities = 1057/1146 (92%), Gaps = 4/1146 (0%)
Strand=Plus/Plus
Query 192 GATGCGAGCCATGACGCCCGCGGTTCGAGATGCCGTGAAATCAATGAAGCAAAAACCGAC 251
|||||||| |||| | || ||||||| ||||||||||||||||||||||||||||||||
Sbjct 408 GATGCGAGAAATGAAGTCCACGGTTCGTGATGCCGTGAAATCAATGAAGCAAAAACCGAC 467
Query 252 GGTCATGATCGTTGACTTTTTTGGTACAGCGTTGTTGTCCATAACCGATGTAGGTGTGAC 311
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 GGTCATGATTGTTGACTTTTTTGGTACAGCGTTGTTGTCCATAACCGATGTAGGTGTGAC 527
Query 312 G-GCTAAGTATGTGTACATACCGTCGCACGCGTGGTTCTTGGCATTAATTGTCTACTTGC 370
| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 528 GAG-TAAGTATGTGTACATACCGTCTCACGCGTGGTTCTTGGCATTAATTGTCTACTTGC 586
Query 371 CAGTGTTGGATAAGGCAGTGGAAGGTGAGTATGTTGATATTAAGGAGCCTATGAAAATAC 430
| || |||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 587 CGGTATTGGATAAGGTAATGGAAGGTGAGTATGTTGATATTAAGGAGCCTATGAAAATAC 646
Query 431 CAGGTTGTAAACCGGTCGGACCAAAGGAGCTTTTGGACACGATGTTAGACCGGTCGGACC 490
||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||
Sbjct 647 CAGGTTGTAAACCGGTCGGACCAAAAGAGCTTTTGGACACAATGTTAGACCGGTCCGACC 706
Query 491 AACAGTACCGTGAGTGTGTACAGAGTGGTTTGGAGATACCTATGAGCGATGGCGTTTTGG 550
|||| |||||||| |||||||||| ||| ||||||||||||||||||||||| |||||||
Sbjct 707 AACAATACCGTGATTGTGTACAGATTGGGTTGGAGATACCTATGAGCGATGGAGTTTTGG 766
Query 551 TAAATACTTGGGAGGAGTTACAAGGGAAGACTCTAGCTGCGCTAAGAGAGGACATGGATT 610
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 767 TAAATACTTGGGGGGAGTTACAAGGGAAGACTCTAGCTGCGCTAAGAGAGGACATAGATT 826
Query 611 TGAACCGGGTTATGAAAGTACCGGTCTACCCTATTGGGCCTATTGTTAGGTCTAATGTGC 670
||||||||||||| ||||||||||| || |||||||| |||||||||||| |||||||||
Sbjct 827 TGAACCGGGTTATAAAAGTACCGGTTTATCCTATTGGACCTATTGTTAGGACTAATGTGC 886
Query 671 TTATTGAAAAACGAAATAGTATTTTGGAGTGGCTAGACAAACAAGGGGAAAGATCAGTTT 730
|||||||||||| ||| |||| || ||||||||||||||||||| ||||||||| |||
Sbjct 887 TTATTGAAAAACCAAACAGTACATTCGAGTGGCTAGACAAACAAGAGGAAAGATCTGTTG 946
Query 731 TGTATGTGTGTTTAGGGAGTGGTGGAACGTTGTCGTTGGAGCAAACGATGGAACTCGCTT 790
| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct 947 TATATGTGTGTTTAGGGAGTGGTGGAACATTGTCGTTTGAGCAAACGATGGAACTAGCTT 1006
Query 791 GGGGTTTAGAGTTAAGTGGCCAAAGTTTCCTATGGGTTCTTCGTAGGCCTGTTTCTTACC 850
|||| |||||||||||| | ||||||||| |||||||||| |||| |||| ||||||||
Sbjct 1007 GGGGGTTAGAGTTAAGTTGTCAAAGTTTCTTATGGGTTCTACGTAAGCCTCCTTCTTACC 1066
Query 851 TTGGTGGGAGCTCAAAAGATGATGATCAAGTGAGTG-CTTGTCTACCAGAAGGTTTCTTG 909
|||| | ||||||||||||||||||||||| |||| | ||||||||||||||||||||
Sbjct 1067 TTGGAGCAAGCTCAAAAGATGATGATCAAGTAAGTGACG-GTCTACCAGAAGGTTTCTTG 1125
Query 910 GACCGTACACGTGGTGTAGGTTTTGTGGTCACGGAATGGGCACCACAAGTTGAGATCTTG 969
||||| |||||||||||||| ||||||| ||| |||||||||| ||||||||||||||
Sbjct 1126 GACCGCACACGTGGTGTAGGGCTTGTGGTAACGCAATGGGCACCGCAAGTTGAGATCTTA 1185
Query 970 AGCCATAGATCAATCGGTGGGTTTTTATCTCATTGTGGTTGGAGCTCAGTCTTGGAGAGT 1029
|||||||||||||||||||||||||| || ||||||||||||||||| || |||||||||
Sbjct 1186 AGCCATAGATCAATCGGTGGGTTTTTGTCACATTGTGGTTGGAGCTCGGTGTTGGAGAGT 1245
Query 1030 TTGACTAAAGGAGTTCCGATCGTTGCTTGGCCTCTATATGCGGAGCAATGGATGAATGCC 1089
|| |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||
Sbjct 1246 TTAACTAAAGGAGTTCCGATCATCGCTTGGCCTCTTTATGCGGAGCAATGGATGAATGCC 1305
Query 1090 ACGTTGCTGACAGAGGAGATTGGTGTGGCCATTCGTACGTCAGATTTACCGTCAAAGAAA 1149
||||||||||| |||||||||||| |||| |||||||||||||| |||||||| ||||||
Sbjct 1306 ACGTTGCTGACGGAGGAGATTGGTATGGCTATTCGTACGTCAGAGTTACCGTCGAAGAAA 1365
Query 1150 GTGATCGGCCGGGAAGAAGTGGCGTATTTGGTGAAAAAGATTGTAGTGGAAGAGGATAAA 1209
|||||| |||||||||||||||||| ||||||||| |||||||||| |||||||||||||
Sbjct 1366 GTGATCAGCCGGGAAGAAGTGGCGTCTTTGGTGAAGAAGATTGTAGCGGAAGAGGATAAA 1425
Query 1210 GAAGGACGGAAGATAAAGGCTAGAGCTGAGGAGGTGAGGGTTAGCTCCGAACGAGCTTGG 1269
|||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1426 GAAGGACGAAAGATAAAGACTAAAGCTGAAGAGGTGAGGGTTAGCTCCGAACGAGCTTGG 1485
Query 1270 ACTCATGGTGGGTCGTCTCATAGTTCTCTCGTTGAATGGGCAAAACGGTGTCGTCTTGTG 1329
|||||||||||||||||||||||||||||| |||||||||||||||| ||| | |||||
Sbjct 1486 ACTCATGGTGGGTCGTCTCATAGTTCTCTCTTTGAATGGGCAAAACGATGTGGGCTTGTA 1545
Query 1330 TCTTAA 1335
||||||
Sbjct 1546 TCTTAA 1551
Score = 252 bits (136), Expect = 8e-66
Identities = 172/189 (91%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 1 ATGGACCAGCCTCACGCT-CTTGTAGTCGCTAGCCCTGGCTTGGGCCACCTTATCCCTGC 59
||||| || ||||||| | ||| |||||||||||||||||||||| ||||||||||||||
Sbjct 143 ATGGAGCATCCTCACG-TGCTTTTAGTCGCTAGCCCTGGCTTGGGGCACCTTATCCCTGC 201
Query 60 CCTCGAACTCGGCAACCGTCTCTCCTCCATCCTCAATATCAACGTCACCATTCTTGCAAT 119
|||||||||||| ||||||||||||| | ||||||| || |||||||||||||||||||
Sbjct 202 CCTCGAACTCGGAAACCGTCTCTCCTTCGTCCTCAACGTCCACGTCACCATTCTTGCAAT 261
Query 120 CACCTCCGGCTCCTCTTCCCTGACAGAAACCGAGATGATACATGCAGCCGCGGCTAGAGG 179
||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||
Sbjct 262 CACCTCCGGCTCCTCTTCCCTCACAGAAACCGAGACCATACATACAGCCGCGGCTAGAGG 321
Query 180 GACCT-TGA 187
||||| |||
Sbjct 322 GACCTGTGA 330
> AT2G18570.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr2:8063320-8065008 FORWARD LENGTH=1689
Length=1689
Score = 1110 bits (601), Expect = 0.0
Identities = 967/1146 (84%), Gaps = 15/1146 (1%)
Strand=Plus/Plus
Query 192 GATGCGAGCCATGACGCCCGCGGTTCGAGATGCCGTGAAATCAATGAAGCAAAAACCGAC 251
|||||||||||||| ||||||||| |||||||||||||||| |||||| | |||||| ||
Sbjct 376 GATGCGAGCCATGAAGCCCGCGGTACGAGATGCCGTGAAATTAATGAAACGAAAACCAAC 435
Query 252 GGTCATGATCGTTGACTTTTTTGGTACAGCGTTGTTGTCCATAACCGAT---GTAGGTGT 308
||||||||| ||||||||||| ||||| | || ||||| || ||||| ||||| |
Sbjct 436 GGTCATGATTGTTGACTTTTTGGGTACGGAACTGATGTCCGTAGCCGATGACGTAGGCAT 495
Query 309 GACGGCTAAGTATGTGTACATACCGTCGCACGCGTGGTTCTTGGCATTAATTGTCTACTT 368
||||||||| || || ||| | || | || ||||||||||||||| | || || |||||
Sbjct 496 GACGGCTAAATACGTTTACGTTCCAACTCATGCGTGGTTCTTGGCAGTCATGGTGTACTT 555
Query 369 GCCAGTGTTGGATAAGGCAGTGGAAGGTGAGTATGTTGATATTAAGGAGCCTATGAAAAT 428
||| ||||| |||| || |||||||||||||||||||||||||||||||||| |||| ||
Sbjct 556 GCCGGTGTTAGATACGGTAGTGGAAGGTGAGTATGTTGATATTAAGGAGCCTTTGAAGAT 615
Query 429 ACCAGGTTGTAAACCGGTCGGACCAAAGGAGCTTTTGGACACGATGTTAGACCGGTCGGA 488
||| |||||||||||||||||||| |||||||| |||| |||||||||||||||||||
Sbjct 616 ACCGGGTTGTAAACCGGTCGGACCGAAGGAGCTGATGGAAACGATGTTAGACCGGTCGGG 675
Query 489 CCAACAGTACCGTGAGTGTGTACAGAG-TGGTTTGGAGATACCTATGAGCGATGGCGTTT 547
||| || || |||||||||| ||| ||| || ||| |||||||||||||||| ||||
Sbjct 676 CCAGCAATATAAAGAGTGTGTAC-GAGCTGGCTTAGAGGTACCTATGAGCGATGGTGTTT 734
Query 548 TGGTAAATACTTGGGAGGAGTTACAAGGGAAGACTCTAGCTGCGCTAAGAGAGGAC-ATG 606
|||||||||||||||||||||||||||| || ||||| |||||||| ||||||||| |
Sbjct 735 TGGTAAATACTTGGGAGGAGTTACAAGGAAACACTCTCGCTGCGCTTAGAGAGGACGA-A 793
Query 607 GATTTGAACCGGGTTATGAAAGTACCGGTCTACCCTATTGGGCCTATTGTTAGGTCTAAT 666
|| |||| |||||| |||||||||||||| || ||||||||||| ||||||||| ||||
Sbjct 794 GAATTGAGCCGGGTCATGAAAGTACCGGTTTATCCTATTGGGCCAATTGTTAGGACTAAC 853
Query 667 GTGCTTATTGAAAAACGAAATAGTATTTTGGAGTGGCTAGACAAACAAGGGGAAAGATCA 726
|| | | || |||| |||||||| || |||||||||||| | ||| ||||||| |||
Sbjct 854 CAGCATGTAGACAAACCCAATAGTATATTCGAGTGGCTAGACGAGCAACGGGAAAGGTCA 913
Query 727 GTTTTGTATGTGTGTTTAGGGAGTGGTGGAACGTTGTCGTTGGAGCAAACGA-TGGAACT 785
|| ||| ||||||||||||||| |||||||||||| |||| |||||||| | |||||||
Sbjct 914 GTGGTGTTTGTGTGTTTAGGGAGCGGTGGAACGTTGACGTTTGAGCAAAC-AGTGGAACT 972
Query 786 CGCTTGGGGTTTAGAGTTAAGTGGCCAAAGTTTCCTATGGGTTCTTCGTAGGCCTGTTTC 845
||||| |||||||||||||||||| ||||| ||| | |||||||| |||||||| | |||
Sbjct 973 CGCTTTGGGTTTAGAGTTAAGTGGTCAAAGGTTCGTTTGGGTTCTACGTAGGCCCGCTTC 1032
Query 846 TTACCTTGGTGG-GAGCTCAAAAGATGATGATCAAGTGAGTGCTTGTCTACCAGAAGGTT 904
|| || || || || ||| | |||||||| || || ||||| ||||||| |||||||
Sbjct 1033 ATATCTCGG-GGCGATCTCCAGCGATGATGAACAGGTAAGTGCCAGTCTACCTGAAGGTT 1091
Query 905 TCTTGGACCGTACACGTGGTGTAGGTTTTGTGGTCACGGAATGGGCACCACAAGTTGAGA 964
|||||||||| || |||||||| || ||||||| ||| |||||||||||||||||||||
Sbjct 1092 TCTTGGACCGCACGCGTGGTGTGGGGATTGTGGTTACGCAATGGGCACCACAAGTTGAGA 1151
Query 965 TCTTGAGCCATAGATCAATCGGTGGGTTTTTATCTCATTGTGGTTGGAGCTCAGTC-TTG 1023
|||||||||||||||| ||||||||||| || ||||| || |||||||| || | | |||
Sbjct 1152 TCTTGAGCCATAGATCGATCGGTGGGTTCTTGTCTCACTGCGGTTGGAGTTC-GGCTTTG 1210
Query 1024 GAGAGTTTGACTAAAGGAGTTCCGATCGTTGCTTGGCCTCTATATGCGGAGCAATGGATG 1083
|| |||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||
Sbjct 1211 GAAAGTTTGACTAAAGGAGTTCCGATCATCGCTTGGCCTCTTTATGCGGAGCAGTGGATG 1270
Query 1084 AATGCCACGTTGCTGACAGAGGAGATTGGTGTGGCCATTCGTACGTCAGATTTACCGTCA 1143
||||||||||| |||| |||||||| ||||||||| ||||||| || || ||||||||
Sbjct 1271 AATGCCACGTTATTGACTGAGGAGATCGGTGTGGCCGTTCGTACATCGGAGTTACCGTCG 1330
Query 1144 AAGAAAGTGATCGGCCGGGAAGAAGTGGCGTATTTGGTGAAAAAGATTGTAGTGGAAGAG 1203
||| ||| ||||| ||||||||||||| | | |||||| ||||||| | | |||||||
Sbjct 1331 GAGAGAGTCATCGGAAGGGAAGAAGTGGCATCTCTGGTGAGAAAGATTATGGCGGAAGAG 1390
Query 1204 GATAAAGAAGGACGGAAGATAAAGGCTAGAGCTGAGGAGGTGAGGGTTAGCTCCGAACGA 1263
||| ||||||||| ||| || | ||||| |||||||||||||||||||||||||||||||
Sbjct 1391 GATGAAGAAGGACAGAAAATTAGGGCTAAAGCTGAGGAGGTGAGGGTTAGCTCCGAACGA 1450
Query 1264 GCTTGGACTCATGGTGGGTCGTCTCATAGTTCTCTCGTT-GAATGGGCAAAACGGTGTCG 1322
||||||| | | | ||||| ||| ||| |||||| || |||||||||||||| |||
Sbjct 1451 GCTTGGAGTAAAGACGGGTCATCTTATAATTCTCTA-TTCGAATGGGCAAAACGATGTTA 1509
Query 1323 TCTTGT 1328
||||||
Sbjct 1510 TCTTGT 1515
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65712513405
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5