BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg320022 Length=1128 Score E Sequences producing significant alignments: (Bits) Value AT2G21890.1 | Symbols: CAD3, ATCAD3 | cinnamyl alcohol dehydrog... 1784 0.0 AT2G21730.1 | Symbols: CAD2, ATCAD2 | cinnamyl alcohol dehydrog... 1759 0.0 AT4G39330.1 | Symbols: ATCAD9, CAD9 | cinnamyl alcohol dehydrog... 765 0.0 > AT2G21890.1 | Symbols: CAD3, ATCAD3 | cinnamyl alcohol dehydrogenase homolog 3 | chr2:9331089-9332646 FORWARD LENGTH=1128 Length=1128 Score = 1784 bits (966), Expect = 0.0 Identities = 1075/1129 (95%), Gaps = 2/1129 (0%) Strand=Plus/Plus Query 1 ATGGTAGATCGAAATAAAGCATTTGGTTGGGCGGCCAACGACGAATCTGGCGTCCTCTCT 60 |||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGGTAGATCAAAATAGAGCATTTGGTTGGGCGGCCAACGACGAATCGGGCGTCCTCTCT 60 Query 61 CCATTTCATTTCTCTAGAAGAGAAAATTGTGAGAACGATGTAACAGTGAAAATCTTGTTC 120 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 61 CCATTTCATTTCTCTAGAAGAGAAAATGGTGAGAACGATGTAACAGTGAAGATCTTGTTC 120 Query 121 TGTGGTGTTTGTCACTCTGATCTTCACACCATCAAAAACCACTGGGGAATCTCTCGTTAC 180 |||||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||| Sbjct 121 TGTGGTGTTTGTCACTCTGATCTTCATACCATCAAGAACCATTGGGGATTCTCTCGTTAC 180 Query 181 CCCGTTGTTCCCGGGCATGAAATCGTTGGAATAGCTACAAAAGTTGGTAAGAATGTGACA 240 ||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 181 CCCATTATTCCCGGGCATGAAATCGTTGGAATAGCAACAAAAGTTGGGAAGAATGTGACA 240 Query 241 AAGTTTAAAGAAGGAGACCGAGTAGGAGTAGGCGTAATAATCGGTTCATGCGAATCATGT 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 241 AAGTTTAAAGAAGGAGACCGAGTAGGAGTAGGCGTAATAATCGGTTCATGCCAATCATGT 300 Query 301 GAATCATGTAACCAAGACTTAGAAAACTATTGTCCTGAAGTCGTTTTTACATACAACTCT 360 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 301 GAATCATGTAACCAAGACTTAGAAAACTATTGTCCTAAAGTCGTTTTCACATACAACTCT 360 Query 361 CGTTCCTCTGACGGAACCAGAAACCAAGGTGGTTATTCCGACGTAATTGTTGTCGATCAC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CGTTCCTCTGACGGAACCAGAAACCAAGGTGGTTATTCCGACGTAATTGTTGTCGATCAC 420 Query 421 CGCTTTGTCCTAAGCATTCCCGATGGTTTACCAAGCGATGCAGCCGCGCCGCTGCTCTGT 480 ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||| Sbjct 421 CGCTTTGTCCTAAGCATTCCCGACGGTTTACCAAGCGATTCAGGCGCGCCGCTGCTCTGT 480 Query 481 GCTGGAATTACTGTGTACAGTCCAATGAAATATTATGGTATGACTGAAGAATCAGGGAAA 540 |||||||| |||||||||||||| ||||| |||||||| |||||| |||||||||||||| Sbjct 481 GCTGGAATCACTGTGTACAGTCCCATGAAGTATTATGGCATGACTAAAGAATCAGGGAAA 540 Query 541 CATTTAGGTGTGAATGGACTTGGTGGACTTGGTCATATCGCTGTGAAGATTGGTAAAGCC 600 | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 541 CGTTTAGGTGTGAATGGACTTGGTGGACTTGGTCATATCGCTGTTAAGATTGGTAAAGCC 600 Query 601 TTTGGTTTAAGAGTTACTGTGATGAGTAGGTCATCAGAGAAAGAGAGGGAAGCTATTGAT 660 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 601 TTTGGTTTAAGAGTTACTGTGATTAGTAGGTCATCAGAGAAAGAGAGAGAAGCAATTGAT 660 Query 661 CGACTCGGTGCTGATTCGTTTCTTGTTACAACGGATTCTCAAAAGATGAAGGATGCAACA 720 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 661 CGACTCGGTGCTGATTCGTTTCTTGTTACAACGGATTCTCAAAAGATGAAGGAAGCAGTT 720 Query 721 GGAACTATGGATTTCGTTATCGATACCGTATCAGCAGAACATGCTCTATTACCGTTGTTT 780 ||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||| Sbjct 721 GGAACTATGGATTTCATTATCGATACGGTATCAGCAGAACATGCTCTATTACCTTTGTTT 780 Query 781 AGTTTGCTTAAAGTGAGTGGAAAGCTTGTGACTTTAGGCTTACCGGAGAAGTCACTCGAG 840 |||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||| Sbjct 781 AGTTTGCTTAAAGTGAGTGGAAAGCTTGTGGCTTTAGGCTTGCTGGAGAAGCCACTCGAC 840 Query 841 CTACCAATCTTCCCTCTAGTTCTCGGAAGGAAAATGGTGGGAGGAAGTCAGATTGGAGGG 900 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 CTGCCAATTTTCCCTCTAGTTCTCGGAAGGAAAATGGTGGGAGGAAGTCAGATTGGAGGG 900 Query 901 ATGAAGGAGACACAAGAGATGCTTGAGTTCTGTGCCAAGCATAATATCGTTTCGGATATT 960 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 901 ATGAAGGAGACACAAGAGATGCTTGAGTTCTGTGCCAAGCATAAAATCGTTTCGGATATT 960 Query 961 GAGCTCATAAAGATGAGTGATATCAACTCTGCGATGGACCGTTTGGCTAAATCTGATGTC 1020 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 961 GAGCTCATAAAGATGAGTGATATCAACTCTGCGATGGACCGTTTGGTTAAATCTGATGTC 1020 Query 1021 AGGTACCGGTTCGTGATCGATGTGGCCAACTCTTTAGTCACTGACTCATCAGCTGAGAAT 1080 |||||||||||||||||||||||||||||||||||| || |||| || |||||||||| | Sbjct 1021 AGGTACCGGTTCGTGATCGATGTGGCCAACTCTTTACTCCCTGAGTCGTCAGCTGAGATT 1080 Query 1081 TTAGA-GGATCATGTCGACCATGGAGTCTCAATCACGTCTAGATTCTGA 1128 ||| | ||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1081 TTA-ACGGAGCATGTCGACCATGGAGTCTCGATCACGTCTAGATTCTGA 1128 > AT2G21730.1 | Symbols: CAD2, ATCAD2 | cinnamyl alcohol dehydrogenase homolog 2 | chr2:9280044-9281623 FORWARD LENGTH=1141 Length=1141 Score = 1759 bits (952), Expect = 0.0 Identities = 1073/1132 (95%), Gaps = 5/1132 (0%) Strand=Plus/Plus Query 1 ATGGTAGATCGAAATAAAGCATTTGGTTGGGCGGCCAACGACGAATCTGGCGTCCTCTCT 60 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 11 ATGGTAGATCAAAATAAAGCATTTGGTTGGGCGGCCAACGACGAATCGGGCGTCCTCTCT 70 Query 61 CCATTTCATTTCTCTAGAAGAGAAAATTGTGAGAACGATGTAACAGTGAAAATCTTGTTC 120 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 71 CCATTTCATTTCTCTAGAAGAGAAAATGGTGAGAACGATGTAACAGTGAAGATCTTGTTC 130 Query 121 TGTGGTGTTTGTCACTCTGATCTTCACACCATCAAAAACCACTGGGGAATCTCTCGTTAC 180 |||||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||| Sbjct 131 TGTGGTGTTTGTCACTCTGATCTTCATACCATCAAGAACCATTGGGGATTCTCTCGTTAC 190 Query 181 CCCGTTGTTCCCGGGCATGAAATCGTTGGAATAGCTACAAAAGTTGGTAAGAATGTGACA 240 ||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 191 CCCATTATTCCCGGGCATGAAATCGTTGGAATAGCAACAAAAGTTGGGAAGAATGTGACA 250 Query 241 AAGTTTAAAGAAGGAGACCGAGTAGGAGTAGGCGTAATAATCGGTTCATGCGAATCATGT 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 251 AAGTTTAAAGAAGGAGACCGAGTAGGAGTAGGCGTAATAATCGGTTCATGCCAATCATGT 310 Query 301 GAATCATGTAACCAAGACTTAGAAAACTATTGTCCTGAAGTCGTTTTTACATACAACTCT 360 |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 311 GAATCATGTAACCAAGACTTAGAAAACTATTGTCCTAAAGTCGTTTTCACATACAACTCT 370 Query 361 CGTTCCTCTGACGGAA-C--CAGAAACCAAGGTGGTTATTCCGACGTAATTGTTGTCGAT 417 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 371 CGTTCCTCTGACGGAACCAGCAGAAACCAAGGTGGTTATTCCGACGTAATTGTTGTCGAT 430 Query 418 CACCGCTTTGTCCTAAGCATTCCCGATGGTTTACCAAGCGATGCAGCCGCGCCGCTGCTC 477 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 431 CACCGCTTTGTCCTAAGCATTCCCGATGGTTTACCAAGCGATTCAGGCGCGCCGCTGCTC 490 Query 478 TGTGCTGGAATTACTGTGTACAGTCCAATGAAATATTATGGTATGACTGAAGAATCAGGG 537 ||||||||||| |||||||||||||| ||||| |||||||| |||||| ||||||||||| Sbjct 491 TGTGCTGGAATCACTGTGTACAGTCCCATGAAGTATTATGGCATGACTAAAGAATCAGGG 550 Query 538 AAACATTTAGGTGTGAATGGACTTGGTGGACTTGGTCATATCGCTGTGAAGATTGGTAAA 597 |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 551 AAACGTTTAGGTGTGAATGGACTTGGTGGACTTGGTCATATCGCTGTTAAGATTGGTAAA 610 Query 598 GCCTTTGGTTTAAGAGTTACTGTGATGAGTAGGTCATCAGAGAAAGAGAGGGAAGCTATT 657 |||||||||||||||||||||||||| |||||||||||||| |||||||| ||||| ||| Sbjct 611 GCCTTTGGTTTAAGAGTTACTGTGATTAGTAGGTCATCAGAAAAAGAGAGAGAAGCAATT 670 Query 658 GATCGACTCGGTGCTGATTCGTTTCTTGTTACAACGGATTCTCAAAAGATGAAGGATGCA 717 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 671 GATCGGCTTGGTGCTGATTCGTTTCTTGTTACAACGGATTCTCAAAAGATGAAGGAAGCG 730 Query 718 ACAGGAACTATGGATTTCGTTATCGATACCGTATCAGCAGAACATGCTCTATTACCGTTG 777 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 731 GTTGGAACTATGGATTTCATTATCGATACGGTATCAGCAGAACATGCTCTATTACCGTTG 790 Query 778 TTTAGTTTGCTTAAAGTGAGTGGAAAGCTTGTGACTTTAGGCTTACCGGAGAAGTCACTC 837 ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| Sbjct 791 TTTAGTTTGCTTAAAGTGAATGGAAAGCTTGTGGCTTTAGGCTTACCGGAGAAGCCACTC 850 Query 838 GAGCTACCAATCTTCCCTCTAGTTCTCGGAAGGAAAATGGTGGGAGGAAGTCAGATTGGA 897 || || ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 851 GACCTGCCAATTTTCTCTCTAGTTCTCGGAAGGAAAATGGTGGGAGGAAGTCAGATTGGA 910 Query 898 GGGATGAAGGAGACACAAGAGATGCTTGAGTTCTGTGCCAAGCATAATATCGTTTCGGAT 957 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 911 GGGATGAAGGAGACACAAGAGATGCTTGAGTTCTGTGCCAAGCATAAAATCGTTTCGGAT 970 Query 958 ATTGAGCTCATAAAGATGAGTGATATCAACTCTGCGATGGACCGTTTGGCTAAATCTGAT 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 971 ATTGAGCTCATAAAGATGAGTGATATCAACTCTGCGATGGACCGTTTGGCTAAATCTGAT 1030 Query 1018 GTCAGGTACCGGTTCGTGATCGATGTGGCCAACTCTTTAGTCACTGACTCATCAGCTGAG 1077 ||||||||||||||||||||||||||||||||||||||| || |||| || ||||||||| Sbjct 1031 GTCAGGTACCGGTTCGTGATCGATGTGGCCAACTCTTTACTCCCTGAGTCGTCAGCTGAG 1090 Query 1078 AATTTAGA-GGATCATGTCGACCATGGAGTCTCAATCACGTCTAGATTCTGA 1128 | |||| | ||| || || |||||||||||||| |||||||||||||||||| Sbjct 1091 ATTTTA-ACGGAGCAGGTGGACCATGGAGTCTCGATCACGTCTAGATTCTGA 1141 > AT4G39330.1 | Symbols: ATCAD9, CAD9 | cinnamyl alcohol dehydrogenase 9 | chr4:18291218-18293383 FORWARD LENGTH=1744 Length=1744 Score = 765 bits (414), Expect = 0.0 Identities = 853/1058 (81%), Gaps = 57/1058 (5%) Strand=Plus/Plus Query 22 TTTGGTTGGGCG-GCCA-ACGACGAATCTGGCGTCCTCTCTCCATTTCATTTCTCTAGAA 79 |||||||||| | || | | ||| |||| || || |||||||| ||||| |||||||||| Sbjct 90 TTTGGTTGGG-GTGCTAGA-GACAAATCCGGTGTTCTCTCTCCTTTTCACTTCTCTAGAA 147 Query 80 GAGAAAATTGTGAGAACGATGTAACAGTGAAAATCTTGTTCTGTGGTGTTTGTCACTCTG 139 |||| ||| |||| || ||||| |||||||| |||||||||||||| ||||| ||| ||| Sbjct 148 GAGACAATGGTGAAAATGATGTGACAGTGAAGATCTTGTTCTGTGGAGTTTGCCACACTG 207 Query 140 ATCTT-CACACCATCAAAAACCACTGGGGAATCTCTCG--TTACCCCGTTGTTCCCGGGC 196 || || ||||||||||||||| ||||||| || |||| |||||| || ||||| |||| Sbjct 208 AT-TTACACACCATCAAAAACGACTGGGG-AT-ACTCGTATTACCCAGTAGTTCCAGGGC 264 Query 197 ATGAAATCGTTGGAATAGCTACAAAAGTTGGTAAGAATGTGAC-AAAGTTTAAAGAAGGA 255 ||||||||||||| || |||||||||||||||||||| ||||| ||| || ||||||||| Sbjct 265 ATGAAATCGTTGGGATCGCTACAAAAGTTGGTAAGAACGTGACTAAA-TTCAAAGAAGGA 323 Query 256 GACCGAGTAGGAGTAGGCGTAAT-AATCGGTTCATGCGAATCATGTGAATCATGTAACCA 314 || || || |||||||| || || | | || || ||| |||| || ||||| ||| |||| Sbjct 324 GATCGTGTCGGAGTAGGAGTGATCAGT-GGCTCGTGCCAATCTTGCGAATCTTGTGACCA 382 Query 315 AGA-CTTAGAAAACTATTGTCCTGAAGTCGT-TTTTACATACAACTCTCG-TT-CCTCTG 370 ||| ||| |||||||| |||||| || | || ||| |||||||| | || || || | Sbjct 383 AGATCTT-GAAAACTACTGTCCTCAAAT-GTCTTTCACATACAA-T-GCGATTGGATCCG 438 Query 371 ACGGAACC-AGAAACCAAGGTGGTTATTCCGACGTA-ATTGTTGTCGATCACCGCTTTGT 428 | |||||| || || | ||||| ||||| || | | ||||| || ||||| || ||||| Sbjct 439 ATGGAACCAAG-AATTACGGTGGCTATTCGGA-GAACATTGTGGTTGATCAACGGTTTGT 496 Query 429 CCTAAGCATTCCCGATG-GTTTACCAAGCGATGCAGCCGCGCCGCTGCTCTGTGCTGGAA 487 | | |||| || | |||||| |||||| | | |||||| |||| |||||||||| Sbjct 497 TTTGCGGTTTCCGGA-GAATTTACCGAGCGATTCGGGTGCGCCGTTGCTGTGTGCTGGAA 555 Query 488 TTACTGTGTACAGTCCAATGAAATATTATGGTATGACTGAAGAATCAGGGAAACATTTAG 547 | |||||||| ||||||||||| |||||||||||||||| || ||||||| ||||||| Sbjct 556 TCACTGTGTATAGTCCAATGAAGTATTATGGTATGACTG-AG--GCAGGGAAGCATTTAG 612 Query 548 GTG-TGAATGGACTTGGTGGACTTGGTCATATCGCTGTGAAGATTGGTAAAGCCTTTGGT 606 | | || |||||||||||| ||||||||| | ||||| |||||||||||||| |||||| Sbjct 613 GGGTTG-CTGGACTTGGTGGGCTTGGTCATGTTGCTGTTAAGATTGGTAAAGCTTTTGGT 671 Query 607 TT-AAGAGTTACTGTGATGAGTAGGTCATCAGA-GAAAG-AGAGGGAAGCTATTGATCGA 663 || || ||||||||| || ||| || || | ||||| ||| |||||| ||| ||| | Sbjct 672 TTGAA-AGTTACTGTCATTAGTTCTTCTTC-TACGAAAGCAGA-GGAAGCCATTAATC-A 727 Query 664 -CTCGGTGCTGATTCGTTTCTTGTTACAACGGATTCTCA-AAAGATGAAGGATGCAACAG 721 || |||||||||||||||||||| ||||| ||| |||| ||| ||||||| ||||| | Sbjct 728 TCTTGGTGCTGATTCGTTTCTTGTCACAACTGATCCTCAGAAA-ATGAAGGCTGCAATTG 786 Query 722 GAACTATGGATTTCGTTATCGATACCG-TATCAGCAGAACATGCTCTATTA-CCGTTGTT 779 |||| ||||| | | ||||||||| || ||||||||| ||||||||| || |||||| | Sbjct 787 GAACAATGGACTACATTATCGATA-CGATATCAGCAGTACATGCTCT-GTATCCGTTGCT 844 Query 780 TAGTTTGCTTAAAGTGAGTGGAAAGCT--TGTGACTTTAGGCTTACCGGAGAAGTCACTC 837 |||| || ||||| | |||||||| | || ||||||||||||| |||||| | ||| Sbjct 845 CGGTTTACTCAAAGTCAACGGAAAGCTCAT-TG-CTTTAGGCTTACCTGAGAAGCCTCTC 902 Query 838 GAGCTACCAATCTTCCCTCTAGTTCTCGGAAGGAAAATGGTGGGAGGAAGTCA-GATTGG 896 ||||||||||| |||||||| |||||||||||||||||||| ||||||||| | | | || Sbjct 903 GAGCTACCAATGTTCCCTCTTGTTCTCGGAAGGAAAATGGTTGGAGGAAGTGACG-TGGG 961 Query 897 AGGGATGAAGGAGACACAAGAGATGCTTGAGTTCTGTGCCAAGCATAATATCGTTTCGGA 956 |||||||||||||||||||||||||||||| ||||| || ||||| || || | || Sbjct 962 AGGGATGAAGGAGACACAAGAGATGCTTGATTTCTGCGCTAAGCACAACATTACAGCTGA 1021 Query 957 TATTGAGCTCATAAAGATG-AGTGATATCAACTCTGCGATGGACCGT-TTGGCTAAATCT 1014 |||||| | || |||||| | ||| || ||| |||||||||| | ||| |||| ||| Sbjct 1022 TATTGAATTGATTAAGATGGA-TGAGATTAACACTGCGATGGAGAGGCTTG-CTAAGTCT 1079 Query 1015 GATGTCAGGTACCGGTTCGTGATCGATGTGGCCAACTC 1052 ||||| |||||| ||||||||||||| ||||| ||||| Sbjct 1080 GATGTTAGGTACAGGTTCGTGATCGACGTGGCTAACTC 1117 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55321000590 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5