BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg320206
Length=2241
Score E
Sequences producing significant alignments: (Bits) Value
AT2G23980.1 | Symbols: ATCNGC6, CNGC6 | cyclic nucleotide-gated... 3681 0.0
AT4G30560.1 | Symbols: ATCNGC9, CNGC9 | cyclic nucleotide gated... 1805 0.0
AT1G15990.1 | Symbols: ATCNGC7, CNGC7 | cyclic nucleotide gated... 460 2e-128
> AT2G23980.1 | Symbols: ATCNGC6, CNGC6 | cyclic nucleotide-gated
channel 6 | chr2:10201104-10204467 REVERSE LENGTH=2516
Length=2516
Score = 3681 bits (1993), Expect = 0.0
Identities = 2162/2245 (96%), Gaps = 5/2245 (0%)
Strand=Plus/Plus
Query 1 ATGTTCGATACTTGTGGCCCAAAAGGAGTCAAATCTCAAGTCATCAGTGGCCAACGCGAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 101 ATGTTCGATACTTGTGGCCCAAAAGGAGTCAAATCTCAAGTCATCAGTGGCCAACGCGAG 160
Query 61 AAGTTTGTGAGGTTAGATAGTATGGACTCGAGGTACTCCCAAAGTTCCGAAACGGGTCTA 120
|| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 161 AACTTTGTGAGGTTAGATAGTATGGACTCAAGGTACTCGCAAAGTTCCGAAACGGGTCTA 220
Query 121 AACAAATGCACATTGAATATAC-A--AGGACCTAATCGTTATACTCAAGGAAGCAAAACA 177
|||||||||||||||||||||| | ||||||||| |||| | |||||||||||||| ||
Sbjct 221 AACAAATGCACATTGAATATACAAGGAGGACCTAAACGTTTTGCTCAAGGAAGCAAAGCA 280
Query 178 TCATCTGGATCTTTTAAGAAAGGTTTTAGAAAAGGATCAGAGGGACTTTGGTCTATAGGT 237
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 281 TCATCTGGATCTTTTAAGAAAGGGTTTAGAAAAGGATCAGAGGGGCTTTGGTCTATAGGT 340
Query 238 AGATCGATTGGGCTCGGTGTTTCGCGTGCTGTGTTTCCAGAAGATCTTGAAGTCTCAGAG 297
|||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 341 CGATCGATTGGACTCGGTGTTTCGCGCGCTGTGTTTCCAGAAGATCTTGAAGTATCAGAG 400
Query 298 AAGAAGATATTTGATCCACAAGACAAGTTTCTTTTACTCTGCAACAAGTTTTTCGTCGCT 357
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 401 AAGAAGATATTTGATCCACAAGACAAGTTTCTTTTACTCTGCAACAAGTTGTTCGTCGCT 460
Query 358 TCGTGTATACTCGCAGTATCCGTGGATCCACTCTTCTTGTATCTTCCGTTT-ATTAATGA 416
||||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||||
Sbjct 461 TCGTGTATACTCGCAGTATCCGTTGATCCTCTCTTCTTGTATCTTCC-TTTCATTAATGA 519
Query 417 TAAAGCGAAATGTGTTGGTATAGATCGGAAACTGGCAATCATAGTAACTACAATAAGGAC 476
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 520 TAAAGCGAAATGTGTTGGTATAGATCGGAAACTGGCTATTATAGTAACTACAATAAGGAC 579
Query 477 AGTTATAGATTCGTTTTATCTCTTTCATATGGCTCTACGGTTTAGAACAGCTTATGTTGC 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 580 AGTTATAGATTCGTTTTATCTCTTTCATATGGCTCTACGGTTTAGAACAGCTTATGTTGC 639
Query 537 TCCCTCGTCACGGGTTTTTGGTCGAGGAGAGCTTGTTATAGACCCTGCACAGATAGCTAA 596
||||||||||||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct 640 TCCCTCGTCACGGGTTTTTGGCCGCGGAGAGCTTGTTATAGACCCGGCGCAGATAGCTAA 699
Query 597 GCGGTATCTGCAACAGTATTTCATCATTGATTTACTTTCCGTTCTTCCGGTTCCACAGAT 656
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 700 GCGGTATCTGCAACAGTATTTCATCATTGATTTACTTTCTGTTCTTCCGGTTCCACAGAT 759
Query 657 TATAGTTTGGAGATTCCTCTATACTTCGAGGGGTGCGAATGTGCTGGCGACAAAACAAGC 716
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 760 TATAGTTTGGAGATTCCTCTATACTTCGAGGGGTGCGAATGTACTGGCGACAAAACAAGC 819
Query 717 ACTTAGATATATCGTGCTAGTTCAATATATCCCGCGTTTTCTTCGAATGTATCCTTTAAG 776
||||||||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct 820 ACTTAGATATATCGTTTTAGTTCAGTATATTCCGCGGTTTCTTCGAATGTATCCTTTAAG 879
Query 777 TTCAGAACTGAAAAGAACAGCCGGGGTCTTCGCTGAAACTGCTTGGGCGGGTGCAGCCTA 836
|||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||| ||
Sbjct 880 TTCAGAACTGAAGAGAACTGCCGGGGTATTCGCTGAAACTGCGTGGGCGGGTGCAGCGTA 939
Query 837 CTACTTGTTGCTTTACATGCTCGCAAGTCATATTGTTGGGGCTTTGTGGTATTTGCTTGC 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 940 CTACTTGTTGCTTTACATGCTCGCAAGTCATATTGTTGGGGCTTTGTGGTATTTGCTTGC 999
Query 897 CTTAGAACGCAATAATGACTGCTGGAGTAGGGCTTGCAACAATAACCAGAACTGTACCAG 956
|||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||||| ||
Sbjct 1000 TTTAGAACGCAATAACGACTGTTGGAGTAAGGCTTGCCACAATAACCAGAACTGTACTAG 1059
Query 957 AAACTTCTTGTTTTGTGGTAACCAAAATATGCAAGGTTATGCTGCGTGGGACAGTATTAA 1016
||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||
Sbjct 1060 AAACTTCTTGTTTTGTGGTAACCAAAATATGAAAGGTTATGCTGCTTGGGACAATATTAA 1119
Query 1017 AGTTTCGTATCTTCAGCTAAAGTGCCCTGTCAATGTGCCCGAGGATGAAGAACCTCCCTT 1076
||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 1120 AGTTTCGTATCTTCAACTAAAGTGCCCTGTCAATGTCCCCGAAGATGAAGAACCTCCTTT 1179
Query 1077 TGATTTTGGAATCTACTTAAGAGCCCTCTCCTCTGGCATCGTCTCGTCTAGGAACTTTGT 1136
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 1180 TGATTTTGGAATCTACTTAAGAGCACTCTCCTCTGGCATCGTCTCGTCTAAGAACTTTGT 1239
Query 1137 CTCTAAGTACTTCTTCTGTTTGTGGTGGGGACTACAGAATCTTAGTACACTTGGTCAAGG 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 CTCTAAGTACTTCTTCTGTTTGTGGTGGGGACTACAGAATCTTAGTACACTTGGTCAAGG 1299
Query 1197 GCTTGAAACCAGCACATACCCTGGAGAGGTTATATTCTCTATAACACTTGCTATTGCTGG 1256
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 GCTTGAAACCAGCACATATCCTGGAGAGGTTATATTCTCTATAACACTTGCTATTGCTGG 1359
Query 1257 ACTTCTACTCTTTGCACTTCTCATTGGAAACATGCAGACTTATCTTCAATCGCTTACCAT 1316
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 ACTTCTACTATTTGCACTTCTCATTGGAAACATGCAGACTTATCTTCAATCGCTTACCAT 1419
Query 1317 CCGGTTAGAAGAAATGCGAGTCAAAAGACGTGACTCAGAACAGTGGATGCGTCATCGAAT 1376
|||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1420 TCGGTTAGAAGAAATGCGAGTAAAAAGACGTGACTCAGAACAGTGGATGCATCATCGAAT 1479
Query 1377 GCTTCCACCAGAACTGCGGGAACGGGTTAGACGATATGATCAGTACAAGTGGTTGGAGAC 1436
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1480 GCTTCCACCAGAACTGCGGGAACGGGTTAGACGATATGACCAGTACAAGTGGTTGGAGAC 1539
Query 1437 GCGTGGCGTTGATGAAGAGAATCTTGTTCAGAACCTCCCAAAGGATCTTAGAAGAGATAT 1496
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1540 GCGTGGAGTTGATGAAGAGAATCTTGTTCAGAATCTCCCAAAGGATCTTAGAAGAGATAT 1599
Query 1497 CAAACGTCATCTCTGTCTCGCCTTAGTCCGAAGAGTTCCATTGTTTGAGAATATGGATGA 1556
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1600 CAAACGTCATCTCTGTCTCGCGTTAGTCCGAAGAGTTCCATTGTTTGAGAATATGGATGA 1659
Query 1557 GAGGCTGCTAGATGCAATCTGTGAGAGGCTTAAGCCATGTCTGTTCACTGAGAAGTCTTA 1616
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1660 GAGGCTGTTAGATGCAATCTGTGAGAGGCTTAAGCCATGTCTGTTCACTGAGAAGTCGTA 1719
Query 1617 CTTGGTTCGTGAGGGAGATCCAGTCAATGAAATGCTCTTCATAATTCGTGGTAGGCTCGA 1676
||||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||
Sbjct 1720 CTTGGTTCGTGAGGGAGATCCAGTCAACGAGATGCTCTTCATTATCCGTGGTAGGCTCGA 1779
Query 1677 GAGTGTAACCACTGATGGTGGGAGAAGCGGATTCTACAACCGGAGTTTGCTTAAAGAAGG 1736
||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||
Sbjct 1780 AAGTGTAACCACTGATGGCGGTAGAAGCGGATTCTACAACCGGAGTTTACTTAAAGAAGG 1839
Query 1737 AGATTTCTGCGGTGACGAGCTTTTGACATGGGCGCTTGATCCCAAATCCGGTTCTAACCT 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 AGATTTCTGCGGTGACGAGCTTTTGACATGGGCGCTTGATCCCAAATCCGGTTCTAACCT 1899
Query 1797 CCCGTCCTCAACAAGAACCGTGAAGGCCTTAACAGAAGTAGAAGCTTTCGCTCTGATAGC 1856
||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1900 CCCTTCCTCTACAAGAACCGTGAAGGCCTTAACCGAAGTGGAAGCTTTCGCTCTGATAGC 1959
Query 1857 CGATGAGCTGAAATTCGTGGCGAGCCAGTTCAGAAGACTCCATAGCAGACAAGTACAACA 1916
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1960 CGATGAGCTGAAATTCGTGGCAAGCCAGTTCAGGAGACTCCATAGCAGACAAGTACAACA 2019
Query 1917 CACGTTCAGATTCTATTCACAGCAATGGAGGACTTGGGCCGCTTGCTTCATGCAAGCCGC 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2020 CACGTTCAGATTCTATTCACAGCAATGGAGGACTTGGGCCGCTTGCTTCATGCAAGCAGC 2079
Query 1977 ATGGAGACGGTACATAAAGAGGAAGAAATTGGAGCAACTTagaaaagaagaggaagaaga 2036
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2080 ATGGCGACGGTACATAAAGAGGAAGAAATTGGAGCAACTTAGAAAAGAAGAGGAAGAAGA 2139
Query 2037 agaagCGGCAGCAGCATCAGTTATAGCAGGAGGAAGTCCGTATAGCATAAGAGCAACGTT 2096
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2140 AGAAGCGGCAGCAGCATCAGTTATAGCAGGAGGAAGTCCTTATAGCATAAGAGCAACGTT 2199
Query 2097 CTTGGCTTCAAAGTTTGCGGCAAATGCACTTCGTAGCGTTCACAAGAACCGGACTGCGAA 2156
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2200 CTTGGCTTCAAAGTTTGCGGCAAATGCACTTCGTAGCGTTCACAAGAACCGGACCGCGAA 2259
Query 2157 ATCAACATTGTTGTTGTCATCTACTAAAGAATTGGTGAAATTTCAGAAACCTCCAGAACC 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2260 ATCAACATTGTTGTTGTCATCTACTAAAGAATTGGTGAAATTTCAGAAACCTCCAGAACC 2319
Query 2217 AGATTTCTCTGCTGAAGATCACTGA 2241
|||||||||||||||||||||||||
Sbjct 2320 AGATTTCTCTGCTGAAGATCACTGA 2344
> AT4G30560.1 | Symbols: ATCNGC9, CNGC9 | cyclic nucleotide gated
channel 9 | chr4:14926834-14930156 REVERSE LENGTH=2395
Length=2395
Score = 1805 bits (977), Expect = 0.0
Identities = 1710/2061 (83%), Gaps = 61/2061 (3%)
Strand=Plus/Plus
Query 13 TGTGGCCCAAAAGGAGTCAAATCTCAAGTCATCAGTGGCCAACGCGAGAAGTTTGTGAGG 72
|||||| ||||| ||||||||| ||||| |||||||||| | |||||||||||| |||
Sbjct 63 TGTGGCAAAAAAGCAGTCAAATCACAAGTAATCAGTGGCCGTCTCGAGAAGTTTGTAAGG 122
Query 73 TTAGATAGTATGGACTCGAGGTACTCCCAAAGTTCCGAAACGGGTCTAAACAAATGCACA 132
|| ||||||||||| || |||||||| || | ||| || || |||||||||| ||||||
Sbjct 123 TTGGATAGTATGGATTCTAGGTACTCGCAGACTTCTGATACTGGTCTAAACAGATGCAC- 181
Query 133 T-TGAATATACAAGGACCTA-A--TCGT--T-ATACTCAAGGAAGCAAAACATCATCTGG 185
| | ||| |||||||||| | | | || | | |||| |||| ||| ||| |||||
Sbjct 182 TCTCAATTTACAAGGACCAACACGTGGTGGTGGTGCTCAGGGAAACAATGTATCTTCTGG 241
Query 186 ATCTTTTAAGAAAGGTTTTAGAAAAGGATC-AGAGGGACTTTGGTCTATAGGTAGATCGA 244
|| ||||||||||| ||||||||||| || | | || |||||||||||||| ||||| |
Sbjct 242 TTCCTTTAAGAAAGGGTTTAGAAAAGGTTCTA-AAGGTCTTTGGTCTATAGGAAGATCAA 300
Query 245 TTGGGCTCGGTGTTTCGCGTGCTGTGTTTCCAGAAGATCTTGAAGTCTCAGAGAAGAAGA 304
|||| | || ||||| || || || ||||| ||||||||| |||| |||||||||||||
Sbjct 301 TTGGTTTAGGGGTTTCACGAGCAGTTTTTCCTGAAGATCTTAAAGTATCAGAGAAGAAGA 360
Query 305 TATTTGATCCACAAGACAAGTTTCTTTTACTCTGCAAC-AAGTTTTTCGTCGCTTCGTGT 363
| ||||||||||| |||||||||||||| ||||| ||| || | ||| || |||| ||
Sbjct 361 TTTTTGATCCACAGGACAAGTTTCTTTTGCTCTGTAACAAACTGTTT-GTTACTTCTTGC 419
Query 364 ATACTCGCAGTATCCGTGGATCCACTCTTCTTGTATCTTCCGTTTATTAATGATAAAGCG 423
|| ||||| || || |||||||| ||||||||||||||||||||| |||| ||||| | |
Sbjct 420 ATTCTCGCTGTGTCTGTGGATCCGCTCTTCTTGTATCTTCCGTTTGTTAAGGATAATGAG 479
Query 424 AAATGTGTTGGTATAGATCGGAAACTGGCAATCATAGTAACTACAATAAGGACAGTTATA 483
|||||| | |||||||| ||||| |||| || |||| ||| || | ||||||| ||
Sbjct 480 AAATGTATCGGTATAGACCGGAAGTTGGCTATTATAGCAACAACGCTGCGGACAGTAATT 539
Query 484 GATTCGTTTTATCTCTTTCATATGGCTCTACGGTTTAGAACAGCTTATGTTGCTCCC-TC 542
||| |||||||||| ||||| |||||||| |||||||||||||||| ||| || ||| ||
Sbjct 540 GATGCGTTTTATCTTTTTCACATGGCTCTTCGGTTTAGAACAGCTTTTGTCGC-CCCTTC 598
Query 543 GTCACGGGTTTTTGGTCGAGGAGAGCTTGTTATAGACCCTGCACAGATAGCTAAGCGGTA 602
|| ||||||||||||||||| || ||||| || ||||||||||||||||| || || ||
Sbjct 599 TTCTCGGGTTTTTGGTCGAGGCGAACTTGTGATTGACCCTGCACAGATAGCAAAACGTTA 658
Query 603 TCTGCAACAGTATTTCATCATTGA-TTTACTTTCCGTTCTTCCGGTTCCACAGATTATAG 661
| |||| ||||||||||||||||| ||| || || || ||||| ||||||||||| |||
Sbjct 659 TTTGCAGCAGTATTTCATCATTGACTTT-CTCTCTGTGCTTCCACTTCCACAGATTGTAG 717
Query 662 TTTGGAGATTCCTCTATAC-T-TCGAGGGGTGCGAA-TGTGCTGGCGACAAAACAAGCAC 718
|||||||||| ||| ||| | || | ||||| || |||||| || ||||| | |||
Sbjct 718 TTTGGAGATT--TCTTTACATCTCTAAAGGTGC-AAGTGTGCTAGCAACAAAGCGGGCA- 773
Query 719 TT-AGATATATCGTGCTAGTTCAATATATCCCGCGTTTTC-TTCGAATGTATCCTTTAAG 776
|| ||| |||| | ||||||||||||| || | ||| |||| |||||||||| ||
Sbjct 774 TTGCGATCTATCATTTTAGTTCAATATATTCCAAG-ATTCATTCGGTTGTATCCTTTGAG 832
Query 777 TTCAGAACTGAAA-AGAACAGCCGGGGTCTTCGCTGAAACTGCTTGGGCGGGTGCAGCCT 835
|||| | | ||| |||||||| || || || ||||||||||||||||| |||||||| |
Sbjct 833 CTCAG-AGTTAAAGAGAACAGCTGGTGTTTTTGCTGAAACTGCTTGGGCTGGTGCAGCTT 891
Query 836 ACTACTTGTTGCTTTACATGCTCGCAAGTCATATTGTTGGGGCTTTGTGGTATTTGCTT- 894
| |||||| | || |||||||||||||| ||||||||||||||| | ||||| || ||
Sbjct 892 ATTACTTGCTACTCTACATGCTCGCAAGCCATATTGTTGGGGCTATATGGTACTT-ATTG 950
Query 895 GCCTTAGAACGCAATAAT-GACTGCTGGAGTAGGGCTTGCAACAATA--A-CCAGAACTG 950
||||| ||||| ||||| || ||||||| | || ||||| |||| | | | ||||
Sbjct 951 GCCTTGGAACGTTATAATGGA-TGCTGGACCAAGGTTTGCAGTAATAGCAGCTTGGACTG 1009
Query 951 TAC-CAGAAACTTCTTGTTTTGTGGTAACCAAAATATGCAAGGTTATGCTGCGTGGGAC- 1008
| | |||||||||| ||||||||||||| |||| ||| | |||||||| || | ||||
Sbjct 1010 T-CACAGAAACTTCCTGTTTTGTGGTAATGAAAAAATGGATGGTTATGCAGC-TTGGACT 1067
Query 1009 AGTATTAAAGTTTC-GTATCTTCAGCTAAAGTGCCCTGTCAATGTGCCCGAGGATGAAGA 1067
| || |||| ||| || ||| || |||| ||||| || ||| || ||| | |
Sbjct 1068 ACCATCAAAGATTCTGT-TCTGCAATTAAATTGCCCAGTTAATACAACC---GAT--A-A 1120
Query 1068 ACCTCCCTTTGATTTTGGAATCTACTTAAGAGCCCTCTCCTCTGGCATCGTCTCGTCTAG 1127
||||| ||||||||||| ||||||||||||||| | ||||||||||| ||||| ||||
Sbjct 1121 TCCTCCTTTTGATTTTGGGATCTACTTAAGAGCCTTGTCCTCTGGCATTGTCTCATCTAA 1180
Query 1128 GAACTTTGTCTCTAAGTACTTCTTCTGTTTGTGGTGGGGACTACAGAATCTTAGTACACT 1187
|| ||||||||||||||||||||||||||| ||||||||||| |||||||| || || ||
Sbjct 1181 GAGCTTTGTCTCTAAGTACTTCTTCTGTTTATGGTGGGGACTTCAGAATCTCAGCACTCT 1240
Query 1188 TGGTCAAGGGCTTGAAACCAGCACATACCCTGGAGAGGTTATATTCTCTATAACACTTGC 1247
|||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||
Sbjct 1241 TGGTCAAGGGCTTGAAACCAGCACATACCCTGGAGAAGTTATATTCTCCATAGCACTTGC 1300
Query 1248 TATTGCTGGACTTCTACTCTTTGCACTTCTCATTGGAAACATGCAGACTTATCTTCAATC 1307
|||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1301 CATTGCTGGACTTCTTCTCTTTGCTCTTCTTATTGGAAACATGCAGACTTATCTTCAATC 1360
Query 1308 GCTTACCATCCGG-TTAGAAGAAATGCGAGTCAAAAGACGTGACTCAGAACAGTGGATGC 1366
||||| |||||| || ||||||||| |||| ||||||||||| ||||||||||||||||
Sbjct 1361 CCTTACAATCCGGCTT-GAAGAAATGAGAGTGAAAAGACGTGATTCAGAACAGTGGATGC 1419
Query 1367 GTCATCGAATGCTTCCACCAGAACTGCGGGAACGGGTTAGACGATATGATCAGTACAAGT 1426
|||||||||||||||||| |||||||| ||||| || ||||||||||| |||||||| |
Sbjct 1420 ATCATCGAATGCTTCCACCGGAACTGCGAGAACGAGTCAGACGATATGACCAGTACAAAT 1479
Query 1427 GGTTGGAGACGCGTGGCGTTGATGAAGAGAATCTTG-TTCAGAACCTCCCAAAGGATCTT 1485
|||||||||| || || ||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1480 GGTTGGAGACACGCGGAGTTGATGAAGAGAAT-TTGGTTCAGAACCTCCCAAAGGATCTG 1538
Query 1486 AGAAGAGATATCAAACGTCATCTCTGTCTCGCCTTAGTCCGAAGAGTTCCATTGTTTGAG 1545
||||||||||||||||| ||||||||||| || || || || || |||||||||||||||
Sbjct 1539 AGAAGAGATATCAAACGCCATCTCTGTCTGGCTTTGGTTCGGAGGGTTCCATTGTTTGAG 1598
Query 1546 AATATGGATGAGAGGCTGCTAGATGCAATCTGTGAGAGGCTT-AAGCCATGTCTGTTCAC 1604
|||||||||||||||||||| ||||||||||||||| || || ||||| ||||||| |||
Sbjct 1599 AATATGGATGAGAGGCTGCTCGATGCAATCTGTGAGCGG-TTGAAGCCGTGTCTGTACAC 1657
Query 1605 TGAGAAG-TCTTACTTGGTTCGTGAGGGAGATCCAGTCAATGAAATGCTCTTCATAATTC 1663
|||| | ||||| |||||||| || || || || || || || ||||||||||| || |
Sbjct 1658 AGAGA-GCTCTTATTTGGTTCGGGAAGGCGACCCGGTTAACGAGATGCTCTTCATTATCC 1716
Query 1664 GTGGTAGGCTCGAGAGTGTAACCACTGATGGTGGGAGAAGCGGATTCTACAACCGGAGTT 1723
||||| |||| |||||||| ||||| ||||| || |||||||| |||| |||||| ||||
Sbjct 1717 GTGGTCGGCTTGAGAGTGTGACCACCGATGGCGGAAGAAGCGGTTTCTTCAACCGCAGTT 1776
Query 1724 TGCTTAAAGAAGGAGATTTCTGCGGTGACGAGCTTTTGACATGGGCGCTTGATCCCAAAT 1783
|||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||
Sbjct 1777 TGCTTAAAGAAGGAGATTTCTGTGGGGAAGAGCTTTTGACATGGGCACTTGATCCCAAAT 1836
Query 1784 CCGGTTCTAACCTCCCGTCCTCAACAAGAACCGTGAAGGC-CTTAACAGAAGTAGAAGCT 1842
| ||||| ||||| || ||||| || ||||||| ||||| || ||| |||||||| |||
Sbjct 1837 CTGGTTCCAACCTACCATCCTCTACCAGAACCGCAAAGGCTCT-AACTGAAGTAGAGGCT 1895
Query 1843 TTCGCTCTGATAGCCGATGAGCTGAAATTCGTGGCGAGCCAGTTCAGAAGACTCCATAGC 1902
|| ||| ||||||| |||||||| ||||| ||||| ||||||||||||||||| || |||
Sbjct 1896 TTTGCTTTGATAGCAGATGAGCTCAAATTTGTGGCTAGCCAGTTCAGAAGACTACACAGC 1955
Query 1903 AGACAAGTACAACACACGTTCAGATTCTATTCACAGCAATGGAGGACTTGGGCCGCT-TG 1961
|| ||||| |||||||| ||||||||||| || || |||||||| |||||||| ||| |
Sbjct 1956 AGGCAAGTTCAACACACATTCAGATTCTACTCGCAACAATGGAGAACTTGGGCTGCTAT- 2014
Query 1962 CTTCATGCAAGCCGCATGGAGACGGTACATAAAGAGGAAGAAA-TTGGAGCAACTTagaa 2020
|||||| |||||||| ||| |||| ||| | |||| ||||||| ||| ||||||| || |
Sbjct 2015 CTTCATACAAGCCGCGTGGCGACGATACGTGAAGAAGAAGAAACTTG-AGCAACTCAGGA 2073
Query 2021 aagaagaggaagaagaagaag 2041
||||||| ||||||| |||||
Sbjct 2074 AAGAAGAAGAAGAAGGAGAAG 2094
> AT1G15990.1 | Symbols: ATCNGC7, CNGC7 | cyclic nucleotide gated
channel 7 | chr1:5491304-5493772 REVERSE LENGTH=2130
Length=2130
Score = 460 bits (249), Expect = 2e-128
Identities = 678/879 (77%), Gaps = 53/879 (6%)
Strand=Plus/Plus
Query 1129 AAC-TTTGTCTCTAAGTACTTCTT-CTGTTTGTGGTGGGGACTACAGAATCTTAGTACAC 1186
||| ||| |||| |||| | | || ||| | |||||||| || || ||||| || |||
Sbjct 1008 AACATTTTTCTCCAAGTTC-TGTTATTGTCTATGGTGGGGTCTTCAAAATCTCAG--CAC 1064
Query 1187 -TT-GGTCAAGGGCTTG-AAACCAGCACATACCCTGGAGAGGTTATATTCTCTATAAC-A 1242
|| |||||||||| || | || || |||| || ||||||||| | || || || | |
Sbjct 1065 GTTAGGTCAAGGGC-TGCAGACAAGTACATTTCCAGGAGAGGTTTTGTTTTCCATTGCGA 1123
Query 1243 CTTGCTATTGCTGGACTTCTACTCTTT-GCACTTCTCATTGGAAACATGCAGACTTATCT 1301
||||||| ||||| ||||| || ||| || |||||||| || || ||||||||||||||
Sbjct 1124 -TTGCTATAGCTGGGCTTCTTCT-TTTCGCGCTTCTCATCGGGAATATGCAGACTTATCT 1181
Query 1302 TCAATCGCTTACCATCCGGT-TAGAAGAAATG-CGAGTCAAAAGACGTGACTCAGAACAG 1359
||| || ||||| | | || | || |||||| || |||||||||||||||||||||||
Sbjct 1182 TCAGTCACTTACTGTTC-GTCTCGAGGAAATGAGGA-TCAAAAGACGTGACTCAGAACAG 1239
Query 1360 TGGATGCGTCATC-GAATG-CTTCCACCAGAACT-GCGGGAACGGGTTAGACGATATGAT 1416
||||||| ||| | | | ||||||| | || | | ||||| | || ||||| ||||||
Sbjct 1240 TGGATGCATCA-CAGG-TCACTTCCACAA-AATTTGAGGGAAAGAGTCAGACGCTATGAT 1296
Query 1417 CAGTACAAGTGGTTGGAGACGCGTGGCGTTGATGAAGAGAATCTT-GTTCAGAACCTCCC 1475
|| ||||| ||||| ||||| | || || || ||||| || | | ||||||| | ||
Sbjct 1297 CAATACAAATGGTTAGAGACAAGAGGTGTAGACGAAGAAAA-CATAGTTCAGAGTTTACC 1355
Query 1476 AAAGGATCTTAGAAGAGATATCAAACGTCATCTCTGTCTCGCCTT-AGTCCGAAGAGTTC 1534
|||||||| |||||||| |||||||| ||||||||||| | || ||| | || ||||
Sbjct 1356 TAAGGATCTCAGAAGAGACATCAAACGCCATCTCTGTCT-GAATTTAGTTAGGAGGGTTC 1414
Query 1535 CAT-TGTTTGAGAATATGGATGAGAGGCTGCTAGATGCAATCTGTGAGAGGCTTAA-GCC 1592
| | |||||| ||||||||||| || | || || |||||||||||||| |||| |||
Sbjct 1415 C-TCTGTTTGCTAATATGGATGAAAGATTACTTGACGCAATCTGTGAGAGA-TTAAAGCC 1472
Query 1593 -ATGTCTGTTCACTGAGAAGT-CTTAC-TTGGTTCGTGAGGGAGATCCAGTCAATGAAAT 1649
| |||| ||||| || ||| ||||| ||| | ||||| ||||| || || || |||||
Sbjct 1473 GA-GTCTTTTCACGGA-AAGCACTTACATTG-TGCGTGAAGGAGACCCCGTTAACGAAAT 1529
Query 1650 GCTCTTCATAATTCGTGGTAGGCTCGAGAGTGTAACCACTGATGGTGGGA-GAAGCGGAT 1708
| | |||||||| || || || | || |||||||| || ||||| |||| ||||||| |
Sbjct 1530 GATGTTCATAATCCGAGGCCGGTTAGAAAGTGTAACAACAGATGG-GGGAAGAAGCGGTT 1588
Query 1709 TCTACAACCG-GAGTTTGCTTAAA-GAAGGAGA-TTTCTGCGGTGACGAGCTTTTGACAT 1765
||| |||| | | ||| | ||||| |||||||| ||| || ||||| |||||| ||||||
Sbjct 1589 TCTTCAACAGAGGGTT-G-TTAAAAGAAGGAGACTTT-TGTGGTGAAGAGCTTCTGACAT 1645
Query 1766 GGGCGCTTGATCCC-AAATCCGGTTCTAACCTCCCGTCCTCAACAAGAACCGTGAAGGC- 1823
|||| ||||| ||| ||| | || || ||| | || || || |||||||| ||||||||
Sbjct 1646 GGGCTCTTGA-CCCTAAAGCAGGCTCAAACTTACCTTCTTCCACAAGAACAGTGAAGGCT 1704
Query 1824 CTTAACAGAAGTAGAAGCTTTCGCTCT-GATAGCCGATGAGCTGAAATTCGTGGCGAGCC 1882
|| | | |||||||| ||||||||||| || ||| || |||||||| || || || || |
Sbjct 1705 CTGA-CTGAAGTAGAGGCTTTCGCTCTTGA-AGCTGAAGAGCTGAAGTTTGTAGCAAGTC 1762
Query 1883 AGTTCAGAAGACTCCATAG-CAGACAAGTACAACACACGTTCAGATTCTATTCACAGCAA 1941
|||| || ||||| ||||| | |||| || ||||| || || || || || || ||||||
Sbjct 1763 AGTTTAGGAGACTTCATAGTC-GACAGGTTCAACAAACATTTAGGTTTTACTCTCAGCAA 1821
Query 1942 TGGAGGACTTGGGCCGCTTGCTTCATGCAAGCCGCATGG 1980
||||| |||||||| |||||||||| ||||| || |||
Sbjct 1822 TGGAGAACTTGGGCTTCTTGCTTCATCCAAGCTGCTTGG 1860
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 111194207175
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5