BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg320426 Length=684 Score E Sequences producing significant alignments: (Bits) Value AT2G26340.2 | Symbols: | unknown protein. | chr2:11215252-1121... 979 0.0 > AT2G26340.2 | Symbols: | unknown protein. | chr2:11215252-11217033 FORWARD LENGTH=839 Length=839 Score = 979 bits (530), Expect = 0.0 Identities = 642/691 (93%), Gaps = 28/691 (4%) Strand=Plus/Plus Query 7 TCACTTCACGCTACCGTGAGCCTCCCAC--TTCTCCACAATCCAAACCGCAAAAAGCTAA 64 ||||| |||||||||||||||||||||| ||||||| | | |||||| ||||||||||| Sbjct 78 TCACTCCACGCTACCGTGAGCCTCCCACTGTTCTCCA-ACT-CAAACCACAAAAAGCTAA 135 Query 65 CGTGCGCAGCTACATTATCACCTCCGCCATGGAAACAGAGCCGGCGAGTTAtctccgtct 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 136 CGTGCGCAGCTACATTATCACCTCCGCCATGGAAACAGAGCCGGCGAGTTATCTCCGTCT 195 Query 125 ccttcttcctctcccgcctcctcctcctccctAACGATGCTATGGCTGGTAGCTTAATGG 184 |||| || |||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 196 CCTTTTTTCTCTCCCGTCTCCTCCTCCTCCCTAACGATGCTATGGCTGGTGGCTTAATGG 255 Query 185 AT-AA----AT--AT--GTCAAGAGGAAAAAACTTGATCCACTTGAAGCATATGTACCAC 235 || || || || ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 256 ATAAATTGGATAAATACGTCAAGAGGAAGAAACTTGATCCACTTGAAGCATATGTACCAC 315 Query 236 CAGTGATTCTAGCTCAGTTACAAATCCAGGATCTTGAGGAATTTTTGAATGTGGAGAAGC 295 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 316 CAGTGATTCTAGCTCAGTTACAAATCCAGGATCTTGAGGGATTTTTGAATGTGGAGAAAC 375 Query 296 CTGAATTCGAGGCGTGTAGACGTCAATTGCGGTCTGGTCCTGCTAGTTCT-TTGCGTGTA 354 ||||||| |||||||||||||| ||||||||||||||||||||||| ||| || |||||| Sbjct 376 CTGAATTTGAGGCGTGTAGACGCCAATTGCGGTCTGGTCCTGCTAGCTCTCTT-CGTGTA 434 Query 355 AACATTCGAGCTGTTGCTCAGTATGCTTCAGATGATGGTGTT-TCCAAAACTGCGACTGA 413 ||||||||| ||| |||||||||||||||||| || |||||||| || ||||| Sbjct 435 AACATTCGA------GCT---TATGCTTCAGATGATGGT-TTCTCCAAAACCGCCACTGA 484 Query 414 TGATGTTGATCGTTGTTTAAGAGCATTGGAAGAACTGGATTCGTTGTTTCTACGTGCGTC 473 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 485 TGATGTTGATCGATGTTTAAGAGCATTGGAAGAACTGGATTCGTTGTTTCTACGTGCGTC 544 Query 474 GAGGAAAGATTCAAATGCAACTGTTG-AGTTGATGAAGTCACAGCTTGGAACAGCGTTAA 532 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 545 GAGGAAAGATTCAAATGCAACTGTTGTA-TTGATGAAGTCACAGCTTGGAACAGCGTTAA 603 Query 533 CCGCACTGGACAGTCTTCTACAAACGGTTCCTTCTCAAGTCCTTGATAAAGGGAAAGCTA 592 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 604 CCGCACTGGACAGTCTTCTACAAACAGTTCCTTCTCAAGTGCTTGATAAAGGGAAAGCTA 663 Query 593 TGGTGGAAGTCTACAGATCAGCATCTGAACAAGAAGCGGGAAGTGATGATTTAGAATCCT 652 ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 664 TGGTGGAAGTCTACAGATCAGCATCTGAAGAAGATGCGGGAAGTGATGATTTAGAATCCT 723 Query 653 CTGAGATAAAGCAGCTCCAATCCATACTGTG 683 ||||||||||||||||||| ||||||||||| Sbjct 724 CTGAGATAAAGCAGCTCCAGTCCATACTGTG 754 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33104302873 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5