BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg320991
Length=720
Score E
Sequences producing significant alignments: (Bits) Value
AT2G32520.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1153 0.0
> AT2G32520.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:13805519-13807536 REVERSE LENGTH=1118
Length=1118
Score = 1153 bits (624), Expect = 0.0
Identities = 689/721 (96%), Gaps = 2/721 (0%)
Strand=Plus/Plus
Query 1 ATGGCCGATTCTA-CTTTCAAGAAAATCCAGATCCAAAGAGATGACACTACATTCGATGC 59
||||| ||||| | |||||| |||||| |||||||||||||||||||||||||| |||||
Sbjct 95 ATGGCGGATTC-AGCTTTCAGGAAAATTCAGATCCAAAGAGATGACACTACATTTGATGC 153
Query 60 CTATGTGGTTGGTAAAGATGATGCACCGGGGATTGTGGTGATTCAAGAATGGTGGGGTGT 119
||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 154 CTATGTGGTCGGTAAAGATGATGCGCCTGGGATTGTGGTGATTCAAGAATGGTGGGGTGT 213
Query 120 TGACTTTGAGATCAAGAACCACGCTATTAAAATCTCACAACTTGAACCTGGTTTCAAAGC 179
||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct 214 TGACTTTGAGATCAAGAACCATGCTATTAAAATCTCACAACTTGAGCCTGGATTCAAAGC 273
Query 180 CCTTATACCTGACTTGTATCGAGGAAAGGTTGGTTTGGATACTGCAGAGGCACAGCATTT 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 274 CCTTATACCTGACTTGTATCGAGGAAAGGTTGGTTTGGATACTGCAGAGGCACAGCATCT 333
Query 240 AATGGATGGCCTTGACTGGCCTGGTGCCATCAAAGATATCCGCGCTTCTGCTAATTGGCT 299
||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||
Sbjct 334 AATGGATGGCCTTGATTGGCCAGGTGCTATCAAAGATATCCGCGCTTCTGTTAATTGGCT 393
Query 300 AAAATCCAATGGCTCTAAAAAGGTTGGTGTGACTGGAATGTGCATGGGAGGTGCATTAGC 359
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 394 AAAATCCAATGGCTCAAAAAAGGTTGGTGTCACTGGAATGTGCATGGGAGGTGCATTAGC 453
Query 360 TATAGCTAGCTCTGTTTTGGTTCCAGAGGTGGATGCTGTTGTTGGATTTTATGGAACCCC 419
||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 454 TATAGCTAGCTCTGTATTGGTTCCTGAGGTGGATGCTGTTGTTGGATTCTATGGAACCCC 513
Query 420 TTCCTCAGAGCTTGCAGATCCGGCACAAGCCAAGGCACCTATTCAGGCTCATTTTGGAGA 479
|||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 514 TTCCTCAGAGCTCGCAGATCCAGCACAAGCTAAGGCACCTATTCAGGCTCATTTTGGAGA 573
Query 480 GCTTGACAATTTTGTCGGTTTCTCTGATGTCACGGCAGCAAAGAATCTAGAAGAGAAGCT 539
||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 574 GCTCGACAATTTTGTCGGTTTTTCTGATGTCACGGCAGCAAAGAATCTCGAAGAGAAGCT 633
Query 540 GAAAGCGTCGGGAGTAGCACATGAAGTTCACATCTATCCAGGAAACGGGCACGCGTTCTT 599
||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct 634 GAAAGCGTCTGGAGTAGCACATGAAGTTCACATCTATCCAGGTAATGGACACGCGTTCTT 693
Query 600 GAACAGGAGTCCAGAAGGAGTGAGCAGAAGGAAAAGCATGGGACTTTCTGATGAAGATGA 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 694 GAACAGGAGTCCAGAAGGAGTGAGCAGAAGGAAAAGCATGGGACTTTCTGATGAAGATGA 753
Query 660 AGCCGCAGTGGAGCTTGCTTGGTCTCGCTTCACCTCCTGGATGAAACAGTACTTGGCTTA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 AGCCGCAGTGGAGCTTGCTTGGTCTCGCTTCACCTCCTGGATGAAACAGTACTTGGCTTA 813
Query 720 A 720
|
Sbjct 814 A 814
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 34912732165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5