BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg321400
Length=1464
Score E
Sequences producing significant alignments: (Bits) Value
AT2G36970.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 2257 0.0
AT2G28080.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 135 9e-31
> AT2G36970.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr2:15529006-15530749 FORWARD LENGTH=1554
Length=1554
Score = 2257 bits (1222), Expect = 0.0
Identities = 1383/1462 (95%), Gaps = 5/1462 (0%)
Strand=Plus/Plus
Query 1 ATGGAGAGAGCAAAGTCGAGGAAGCCTCATATCATGATGATACCATATCCACTTCAAGGT 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 45 ATGGAGAGAGCAAAGTCGAGGAAGCCTCATATCATGATGATACCATACCCACTTCAAGGT 104
Query 61 CACGTTATACCTTTTGTCCACTTAGCCATCAAACTAGCTTCTCATGGCTTCACCATCACT 120
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 105 CACGTTATCCCTTTTGTCCACTTAGCCATCAAACTTGCTTCTCATGGCTTCACCATCACT 164
Query 121 TTCGTCAACACCGACTCCATCCACCACCACATCTCCACGGCTCGTCACGGTGACGCCGGT 180
|||||||||||||||||||||||||||||||||||||| |||| || | ||||||||||
Sbjct 165 TTCGTCAACACCGACTCCATCCACCACCACATCTCCACCGCTCACCAAGATGACGCCGGT 224
Query 181 GACATCTTCTCCGCCGCTCGCAGCTCCGGCAAGCTCGATATACGTTACACCACTGTGACC 240
|||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||| |
Sbjct 225 GACATCTTCTCCGCCGCTCGCAGCTCCGGCCAGCACGACATACGTTACACCACCGTGAGC 284
Query 241 GACGGCTTCCCTTTGGACTTTGACCGGTCACTTAACCATGACCAGTTTTTCGAAGGCATT 300
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 285 GACGGCTTCCCTTTAGACTTTGACCGGTCACTGAACCATGACCAGTTTTTCGAAGGCATT 344
Query 301 CTCCACGTCTTCTCTGCCCACGTGGATGATCTCATCGCTAAACTCTCCCACCGGGACGAT 360
|||||||||||||||||||||||||||||||||||||| |||||||||| ||| || |||
Sbjct 345 CTCCACGTCTTCTCTGCCCACGTGGATGATCTCATCGCCAAACTCTCCCGCCGTGATGAT 404
Query 361 CCTCCGGTAACTTGCTTGATCGCCGACACGTTTTATGTTTGGTCATCTATGATTTGCGAC 420
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 405 CCTCCCGTGACTTGCTTGATCGCCGACACGTTTTATGTTTGGTCATCTATGATTTGCGAC 464
Query 421 AAGCACAACCTAGTTAATGTCTCGTTTTGGACTGAACCTGCCTTGGTCCTCAATCTCTAT 480
||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 465 AAGCACAACCTTGTAAATGTCTCGTTTTGGACCGAACCTGCCTTGGTCCTCAATCTCTAT 524
Query 481 TATCACATGGATCTCCTCATATCTAACGGTCATTTCAAATCTCTTGATAATCGTAAAGAC 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 525 TATCACATGGATCTCCTCATATCTAACGGTCATTTCAAATCTCTTGATAATCGTAAAGAC 584
Query 541 GTGATCGATTACGTACCAGGGGTTAAAGCAATAGACCCAAAGGACTTGATGTCATATCTT 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 585 GTGATCGATTACGTACCAGGGGTTAAAGCAATAGAACCAAAGGACTTGATGTCATATCTT 644
Query 601 CAAGTAAGCGAGAAAGACGTAGACACAAATACAGTGGTCTATAGAATATTATTCAAGGCC 660
||||||||||| ||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct 645 CAAGTAAGCGACAAAGACGTAGACACAAATACAGTAGTATACAGAATATTATTCAAGGCC 704
Query 661 TTTAAAGACGTCAAGAGAGCCGATTTTGTCTTATGCAACACGGTGCAAGAACTCGAACCA 720
||||||||||||||||||||||| || ||| ||||||||||||||||||| |||||||||
Sbjct 705 TTTAAAGACGTCAAGAGAGCCGACTTCGTCGTATGCAACACGGTGCAAGAGCTCGAACCA 764
Query 721 GACTCTCTCTCGGCTTTACAAGCCAAACAACCGGTTTACGCTATCGGTCCGGTTTTCTCA 780
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 765 GACTCTCTCTCGGCTCTACAAGCCAAACAACCGGTTTACGCTATCGGTCCGGTTTTCTCA 824
Query 781 ACTCATTCGGTTGTCCCCACAAGCTTATGGGCCGAGTCAGACTGCACCGAGTGGCTTAAG 840
||| ||||||| || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 825 ACTGATTCGGTAGTTCCCACAAGCTTATGGGCCGAGTCAGACTGTACCGAGTGGCTTAAG 884
Query 841 GGCAGGCCCACCGGGTCGGTTCTCTACGTCTCGTTTGGTAGCTATGCACATGTTGGTAAG 900
||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 GGCCGGCCCACTGGGTCAGTTCTCTACGTCTCGTTTGGTAGCTATGCACATGTTGGTAAG 944
Query 901 AAAGAGATTGTTGAGATAGCTCATGGGCTTTTGCTTAGTGGGATTAGTTTCATTTGGGTT 960
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 AAGGAGATTGTTGAGATAGCTCATGGGCTTTTGCTTAGTGGGATTAGTTTCATTTGGGTT 1004
Query 961 TTACGTCCGGATATAGTTGGATCCGACG-AGCCGGATTTTCTTCCAGTTGGGTTTGTGGA 1019
|||||||||||||||||||||||| ||| | || ||||||||||||| |||||||||||
Sbjct 1005 TTACGTCCGGATATAGTTGGATCCAACGTA-CCAGATTTTCTTCCAGCCGGGTTTGTGGA 1063
Query 1020 CCAAGCCCAAGATCGAGGTCTTGTGGTCCAGTGGTGTTGCCAGATGGCAGTAATTTCAAA 1079
|||||||||||||||||||||||||||||| ||||| |||||||||| ||| ||||||||
Sbjct 1064 CCAAGCCCAAGATCGAGGTCTTGTGGTCCAATGGTGCTGCCAGATGGAAGTTATTTCAAA 1123
Query 1080 TCCAGCTGTGGGAGGtttttttACACATTGTGGATGGAATTCAATTCTAGAGAGTGTTTG 1139
||| || |||||||| ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1124 TCCGGCCGTGGGAGGGTTTTTCACACATTGTGGATGGAATTCAATTCTAGAGAGCGTTTG 1183
Query 1140 GTGTGGTTTGCCTTTGTTGTGTTATCCGCTTTTGACAGATCAGTTCACGAATAGGAAGCT 1199
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1184 GTGTGGTTTGCCTTTGTTGTGTTATCCACTTTTGACAGATCAGTTCACGAATAGGAAGCT 1243
Query 1200 TGTGGTTGATGATTGGTGCATTGGGATTGACCTTTGTGAGAAGAAGACGATCACAAGGGA 1259
|||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||||
Sbjct 1244 TGTGGTCGATGATTGGTGCATTGGGATTAATCTTTGTGAGAAGAAGACAATCACAAGGGA 1303
Query 1260 CCAAGTCTCGGCGAATGTTAAAAGATTGATGATGAATGGAGAAACTTCAAGTGAGCTGAG 1319
||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| ||
Sbjct 1304 CCAAGTCTCAGCGAATGTTAAAAGATTGATGA--A-TGGAGAAACTTCAAGTGAGCTAAG 1360
Query 1320 AAAGAACGTTGAAAAGGTTAAACGTCATCTCAAAGCTGCGGTTACAGCCGTTGGATCTTC 1379
||| || |||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 1361 AAACAATGTTGAAAAGGTTAAACGTCATCTCAAAGATGCGGTTACAACCGTTGGATCTTC 1420
Query 1380 GGAGACGAATTTTAACACGTTCATTGGTGAGGTCCGAGATAGAATAGAAACTAAATTATG 1439
|||||||||||||||| ||| || ||||||||||| ||||||||||||||||||| ||
Sbjct 1421 GGAGACGAATTTTAACTTGTTTGTTAGTGAGGTCCGAAATAGAATAGAAACTAAATTGTG 1480
Query 1440 TAATGTAAATGGACTGGAAATA 1461
||||||||||||||| ||||||
Sbjct 1481 TAATGTAAATGGACTAGAAATA 1502
> AT2G28080.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr2:11960571-11963293 REVERSE LENGTH=1718
Length=1718
Score = 135 bits (73), Expect = 9e-31
Identities = 287/386 (74%), Gaps = 32/386 (8%)
Strand=Plus/Plus
Query 869 TCTCGTTTGGTAGCTATGCACATGTTGGTAAGAAAGAGATTGTTGAGATAGCTCATGGGC 928
|||| |||||||| || || ||||| ||||| || |||||||||||||||| |||
Sbjct 944 TCTCCTTTGGTAGTTACGCTCATGTCACAAAGAAGGATCTTGTTGAGATAGCTCACGGGA 1003
Query 929 TTTTGCTT-AGTGGGA-TTAGTTTCATTTGGGT-TTTACGTCCGGATATAGTTGGATCCG 985
||||| || ||| | ||| |||| ||||||| | | | || || || ||| | || |
Sbjct 1004 TTTTG-TTGAGT-AAAGTTAATTTCGTTTGGGTGGTGA-GACCAGACATTGTTAGTTCAG 1060
Query 986 ACG-AGCCGGATTTTC-TT-CCAGTTGGGTTTGTGGAC-CAAGCCCAAGATCGAGGTCTT 1041
||| | || | | | || |||| ||||||| || |||| |||||| || ||
Sbjct 1061 ACGAAACC--A-ATCCATTACCAGAAGGGTTTG-AAACAGAAGCTGGAGATCGTGGGATT 1116
Query 1042 GTGGT-CCAGTGGTGTTGCCAGATGGCAGTAATT-TCAAATCCAG-CTGTGGGAGGtttt 1098
|| | ||| |||||||| || ||| | || || ||| || || ||| || || |||
Sbjct 1117 GTAATACCA-TGGTGTTGTCAAATGACGGT-TTTGTCACAT-GAGAGTGTTGGTGGGTTT 1173
Query 1099 tttACACATTGTGGATGGAATTCAAT-TCTAGAGAGTG-TTTGGTGTG-GTTTGCCTTTG 1155
|| ||||||||||| ||||| || || | | |||| | ||||||||| | || ||| ||
Sbjct 1174 TTGACACATTGTGGTTGGAACTCGATAT-TGGAGA-CGATTTGGTGTGAGGTT-CCTGTG 1230
Query 1156 TTGTGTTATCCGCTT-TTGACAGATCA-GTTCACGAATAGGAAGCTTGTGGTTGATGATT 1213
||||||| ||| || ||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct 1231 TTGTGTTTTCC-ATTGTTGACTGATCAGGTT-ACGAATAGGAAGCTTGTGGTTGATGATT 1288
Query 1214 GGT-GCATTGGGATTGACCTTTGTGA 1238
|| | ||||||||| | ||||||||
Sbjct 1289 GGGAG-ATTGGGATTAATCTTTGTGA 1313
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72188383710
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5