BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg321495 Length=1188 Score E Sequences producing significant alignments: (Bits) Value AT2G37920.1 | Symbols: emb1513 | copper ion transmembrane trans... 1013 0.0 AT2G37925.1 | Symbols: COPT4 | copper transporter 4 | chr2:1587... 580 8e-165 > AT2G37920.1 | Symbols: emb1513 | copper ion transmembrane transporters | chr2:15868580-15870071 REVERSE LENGTH=1398 Length=1398 Score = 1013 bits (548), Expect = 0.0 Identities = 719/794 (91%), Gaps = 42/794 (5%) Strand=Plus/Plus Query 404 CTCCAATGGCGGCGACGATGATCGGATTTAACCTCTCCTGCTTCAAATCAACATCGTtct 463 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 43 CTCCAATGGCGGCGACGATGATCGGAATTAACCTCTCCTGCTTCAAATCAACATCGTTCT 102 Query 464 tctcaccggacctcaattctctccactcaaagctctctctcctatctctcaAACCCTATC 523 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 103 TCTCACCGGACCTCAATTCTCTCCAATCAAAGCTCTCTCTCCTATCTCTCAAACCCTCTC 162 Query 524 C-ACA-A-CCACGAAAATCAACAGTTATCCGTATGGGCGGTGGTCCGAGAACATTCCCCG 580 | ||| | ||||| ||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 163 CAACACAGCCACGGAAATCAACAGTCATCCGTATGGGCGGTGGTCCGAGAACTTTCCCCG 222 Query 581 GCGGTGTCTCAAAATGGCAGTGGAAAAGGATGCAAGCGAAGAAACAGAAACAGCTTCTCA 640 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 223 GCGGTGTATCAAAATGGCAATGGAAAAGGATGCAAGCGAAGAAACAGAAACAGCTTCTCA 282 Query 641 AAGCGAGGTTATGCAGAGAACGTCAGATCTACGAGATGAGAAAACGCGCAGAGCTAAAAG 700 |||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct 283 AAGCAAGGTTATGCAGAGAACGTCAGATCTACGAGATGCGAAAACGCGCCGAGCTAAAAG 342 Query 701 CGGCGGTGGCTGAGCTTGAACGACCATGGGAACCGATTCAGAAACCACCGAATCTATTCT 760 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 343 CGGCGGTGGCTGAGCTAGAACGACCATGGGAACCGATTCATAAACCACCGAATCTATTCT 402 Query 761 CTGTTTGTGCTGATGAACAAGTTAAGGTGCTCGCGGATCGGTTTCAGAAACCTGGTGGAT 820 | |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| Sbjct 403 CAGTTTGTGCTGATGAGCAAGTTAAAGTACTCGCGGATCGGTTTCAGAAACCTGGTGGAT 462 Query 821 TTGATTTATGGACTGATAGAGATGGTCCTCAATTGTTTGAGAGTGTTGATGATTTGCCTT 880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 463 TTGATTTATGGACTGATAGAGATGGTCCTCAATTGTTTGAGAGTGTTGATGATTTGCCTT 522 Query 881 CTGCTAGGTTTTTTCCTAAAGGTGTTGTTCATAGTGTCAAACCTTATGGTAGATTATCAT 940 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 523 CTGCTAGGTTTTTTCCTAAAGGTGTTGTTCATAGTGTTAAACCTTATGGTAGATTATCAT 582 Query 941 CAACCTCTGTTGATGATGGTGATTCTGATGGTAAAGAGAGTGAGGTGAAAGATGAAGAAA 1000 | | |||||||| | || || |||||| | ||||||||||| ||||||||||||| Sbjct 583 CTAGCTCTGTTG-T--TG---AT---GATGGTGATGAGAGTGAGGTTAAAGATGAAGAAA 633 Query 1001 TTGGGAAGAAGCTACGTGGTCGTAGGGTGAGAAAGAGAGTTGGTATCAGGGGGATAGAGA 1060 ||||||||||| ||||||||||||||||||| ||||||| | | | || || Sbjct 634 TTGGGAAGAAGTTACGTGGTCGTAGGGTGAGGAAGAGAG--G-T----G----AT-GA-- 679 Query 1061 GAGGTGAAGAAGGAGGTAAGAGGAGGATTGAGAATCGTGTTAATGGTGGGAGATTGAGAA 1120 || || || ||||||||||| ||| ||||||| |||||||||||||||||||| Sbjct 680 ----TG--GA-GG---TAAGAGGAGGACTGAAAATCGTGGTAATGGTGGGAGATTGAGAA 729 Query 1121 ATGGAAAATCTTCT-C-----AGGTTTATGAAATGACTTTGCAGAATGATGGGAGATATG 1174 ||||| |||||| | |||| ||||| |||||||||||||||||||||||||||| Sbjct 730 ATGGAGGGTCTTCTTCTTCTCAGGTGTATGATATGACTTTGCAGAATGATGGGAGATATG 789 Query 1175 AAATTGGATCTTAG 1188 |||||||||||||| Sbjct 790 AAATTGGATCTTAG 803 > AT2G37925.1 | Symbols: COPT4 | copper transporter 4 | chr2:15870220-15870697 REVERSE LENGTH=478 Length=478 Score = 580 bits (314), Expect = 8e-165 Identities = 373/402 (93%), Gaps = 2/402 (0%) Strand=Plus/Plus Query 1 ATGTTGTCAAGCAAAAACGTCGTCGTAGTAGAGGCTTGGAACACCACCACCACAACGCAA 60 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 3 ATGTTGTCGAGCAAAAACGTTGTCGTAGTAGAGGCTTGGAACACCACCACCACAACGCAA 62 Query 61 ACGCAAACGCCACATAGACCCTCACTGTTACATCCAACATTCTACTGGGGTTACAACTGC 120 |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct 63 ACGCAAACGCCACATAGACCGTCACTGTTACACCCAACATTCTATTGGGGTTACAACTGC 122 Query 121 CAAGTACTCTTCTCAGGATGGCCTGGTCCTGACCGTGGGATGTATGCTCTTGCACTTATC 180 ||||| ||||||||||| ||||||||| ||||||||||||||||||| || ||||||||| Sbjct 123 CAAGTGCTCTTCTCAGGCTGGCCTGGTTCTGACCGTGGGATGTATGCACTCGCACTTATC 182 Query 181 TTCGTCTTCTTTTTGGCGTTCTTAGCCGAGTGGCTAGCTCGGTGCTCTGACGCATCCTCC 240 |||||||||||| ||||||||||||| |||||||| ||||||||||||||||| || ||| Sbjct 183 TTCGTCTTCTTTCTGGCGTTCTTAGCTGAGTGGCTTGCTCGGTGCTCTGACGCGTCATCC 242 Query 241 ACCAAACCGGGTGCAGATAAACTTGCTAAAGTTGCGTTTCGCACGGCTATGTATGCCGTC 300 | ||||| |||||| ||||| |||||||||||||| |||||||||||||||||| ||||| Sbjct 243 ATCAAACAGGGTGCCGATAAGCTTGCTAAAGTTGCATTTCGCACGGCTATGTATACCGTC 302 Query 301 AAGTCCGGCTTTAGCTACCTTGTGAT-CTTGGCCGTTGTTTCTTTCAATGGTGGGGTTTT 359 |||||||||||||||||||| ||||| || ||| |||||||| ||||| ||||| ||||| Sbjct 303 AAGTCCGGCTTTAGCTACCTAGTGATTCT-GGCTGTTGTTTCCTTCAACGGTGGTGTTTT 361 Query 360 CCTAGCCGCGATTTTCGGGCATGCTCTTGGGTTCGCCGTTTT 401 |||||||||||||||||||||||||||||||||||| ||||| Sbjct 362 CCTAGCCGCGATTTTCGGGCATGCTCTTGGGTTCGCTGTTTT 403 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58333033290 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5