BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg321659 Length=1503 Score E Sequences producing significant alignments: (Bits) Value AT2G39740.1 | Symbols: | Nucleotidyltransferase family protein... 2374 0.0 > AT2G39740.1 | Symbols: | Nucleotidyltransferase family protein | chr2:16575752-16579120 FORWARD LENGTH=2142 Length=2142 Score = 2374 bits (1285), Expect = 0.0 Identities = 1397/1452 (96%), Gaps = 4/1452 (0%) Strand=Plus/Plus Query 1 ATGAGTAGAAATCCTTTCCTGGATCCTACCCTTCAAGAAATTCTTCAAGTGATTAAACCC 60 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 191 ATGAGTAGAAACCCTTTCCTGGATCCTACTCTTCAAGAAATTCTTCAAGTGATTAAACCC 250 Query 61 ACACGAGCAGATTGGGATACGAGGATCAGAGTCATTGATCAGTTGCGTGACGTCTTACAA 120 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 251 ACACGAGCAGATAGGGATACGAGGATCACAGTCATTGATCAGTTGCGTGACGTCTTACAA 310 Query 121 ACCGTAGAATGCTTAAGAGGTGCTACTGTTCAACCATTTGGATCCTTTGTGTCAAATCTC 180 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 311 TCCGTAGAATGTTTAAGAGGTGCTACTGTTCAACCATTTGGATCCTTTGTGTCAAATCTC 370 Query 181 TTCACACGATGGGGAGACTTGGATCTCTCTGTTGACTTATTCAGCGGTTCTTCCATCTTG 240 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 371 TTCACACGATGGGGAGACTTAGATATCTCTGTTGACTTATTCAGCGGTTCTTCCATCTTG 430 Query 241 TTCACTGGAAAGAAGCAGAAACAAACTTTACTCGGACATTTACTACGAGCACTGAGAGCG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 431 TTCACTGGAAAGAAGCAGAAACAAACTTTACTCGGACATTTACTACGAGCACTGAGAGCG 490 Query 301 AGTGGTCTATGGTACAAACTGCAATTTGTTATTCATGCGCGAGTTCCCATTCTGAAAGTC 360 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 491 AGTGGTCTATGGTACAAACTGCAATTTGTTATTCATGCGCGAGTTCCTATTCTGAAAGTA 550 Query 361 GTGAGCGGCCACCAGAGAATTTCTTGTGATATTTCTATTGATAACCTGGATGGGCTTTTG 420 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 551 GTGAGCGGCCACCAGAGAATTTCTTGTGACATTTCTATTGATAACCTGGATGGGCTTTTG 610 Query 421 AAGAGCAGGTTCTTGTTCTGGATCAGTGAAATAGATGGGAGATTCCGCGACCTGGTTTTG 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 611 AAGAGCAGGTTCTTGTTCTGGATCAGTGAAATAGATGGGAGATTCCGCGACCTGGTTTTG 670 Query 481 CTAGTGAAGGAATGGGCGAAAGCTCATAATATCAACGACTCAAAGAACGGGACTTTCAAC 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 671 CTAGTGAAGGAATGGGCGAAAGCTCATAATATCAACGACTCAAAGACCGGGACTTTCAAC 730 Query 541 TCTTACTCTCTCAGTTTGTTAGTCATCTTCCATCTTCAGACTTGTGTGCCTGCAATCTTG 600 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 731 TCTTACTCTCTCAGTTTGTTAGTCATCTTCCATTTTCAGACTTGTGTGCCTGCAATCTTG 790 Query 601 CCGCCTCTAAGAGTCATATATCCGAAGAGTGCGGTTGATGATCTGACAGGTGTACGAAAA 660 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 791 CCGCCTCTAAGAGTGATATATCCGAAGAGTGCGGTTGATGATCTGACAGGTGTACGGAAA 850 Query 661 ACTGCAGAGGAAAGCATAGCGCAAGTTACTGCTGCTAATATTGCGAGATTTAAATTAGAC 720 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 851 ACTGCAGAGGAAAGCATAGCGCAAGTTACTGCTGCTAATATTGCGAGATTTAAATCAGAG 910 Query 721 ACAGCAAAATCAGTCAATCGAAGCTCGCTCTCGGAGCTTTTGGTCTCGTTTTTTGCAAAG 780 | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 911 AGAGCAAAATCAGTCAATCGAAGCTCGCTCTCGGAGCTGTTGGTCTCTTTTTTTGCAAAG 970 Query 781 TTTTCAGACATAAACTTGAAGGCCCAAGAGTTCGGTGTTTGCCCGTTTACTGGAAGATGG 840 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 971 TTTTCAGACATAAACGTGAAGGCCCAAGAGTTCGGTGTTTGCCCGTTTACTGGAAGATGG 1030 Query 841 GAAAAC-ATAAGCAGCAACACTACATGGCTGCCAAAGACATACTCACTCTTTGTTGAAGA 899 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1031 GAAA-CTATAAGCAGCAACACTACATGGCTGCCAAAGACATACTCACTCTTTGTTGAAGA 1089 Query 900 TCCTTTTGAGCAACCGGTGAACGCTGCAAGGAGTGTGAGCCGTAGAAATTTGGATAGAAT 959 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1090 TCCTTTTGAGCAGCCGGTGAACGCTGCAAGGAGTGTGAGCCGTAGAAATTTGGACAGAAT 1149 Query 960 AGCTCAAGTATTTCAGATTACATCGCACCGTCTTGTCTCAGATTGTAACAGGAACTCCAT 1019 |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||| Sbjct 1150 AGCTCAAGTATTTCAGATTACATCGCGCCGTCTTGTCTCAGAGTGTAACAGAAACTCCAT 1209 Query 1020 CATTGGGGTTCTGACAGGGAAACACATTCAAGAGTCTTTGTATAGAACAATAAGCCTCC- 1078 ||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 1210 CATAGGGATTCTGACAGGGCAACACATTCAAGAGTCTTTGTACAGAACAATAAGCCTCCC 1269 Query 1079 ATAGTCAACATCATGCAAACGGTATGCACAATGTCCGTAATCTGCATGGTCAGGCTAGGC 1138 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1270 A-AGTCAACATCATGCAAACGGTATGCACAATGTCCGTAATCTGCATGGTCAGGCTAGGC 1328 Query 1139 CTCGGAACCAGCAAATGCAGCAAAATTGGTCACAGAGCTACAATACCCAAAATCCACCAT 1198 | | |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1329 CACAGAACCAGCAAATGCAGCAAAATTGGTCACAGAGCTACAATACCCCGAATCCACCAC 1388 Query 1199 ATTGGCCACCTCCAACACAATCCCGACAACAACAGAATTGGCCTCAGAACAGCCCCAGGA 1258 |||||||||| | |||||||||||||| ||||||||||||| ||||||||| |||||||| Sbjct 1389 ATTGGCCACCACTAACACAATCCCGACCACAACAGAATTGGACTCAGAACAACCCCAGGA 1448 Query 1259 ATCTTCAGGGGCAACCACCTGTCCAAGGCCGAACTTGGCCTGTAATCACACAAACTCAAA 1318 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1449 ATCTTCAGGGGCAACCACCTGTCCAAGGCCAAACTTGGCCTGTAATCACACAAACTCAAA 1508 Query 1319 CGGAGCAGAAGAATCAATACAAGAACGGGAACCGACCATTGAAAAATACATCTGCAGGTT 1378 || ||||||||| | ||| |||| ||||||||||||||||||||||||||||| |||| Sbjct 1509 CGCAGCAGAAGAGCCCATATAAGAGTGGGAACCGACCATTGAAAAATACATCTGCTGGTT 1568 Query 1379 CAAGTCAGAATCAGGGTCACATTGGTAAGCCATCAGGTCATATGAATGGTGTGAACTCTG 1438 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1569 CAAGTCAGAATCAGGGCCACATTGGTAAGCCATCTGGTCATATGAATGGTGTGAACTCTG 1628 Query 1439 CAAGACCTGCAT 1450 |||||||||||| Sbjct 1629 CAAGACCTGCAT 1640 Score = 132 bits (71), Expect = 1e-29 Identities = 81/86 (94%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 1418 ATATGAATGGTGTGAACTCTGCAAGACCTGCATCAAAAATTCCAAGCCAAGGCGGACAGA 1477 ||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| Sbjct 1641 ATACGAATGGTGTGAACTCCGCAAGGCCTCCATCAAAAATTCCAAGCCAAGGCGGACAGA 1700 Query 1478 TGTGGAGACCGAGACATGAGCAGTAG 1503 | |||||||||||||||||||||||| Sbjct 1701 TCTGGAGACCGAGACATGAGCAGTAG 1726 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74146204965 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5