BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg321881 Length=3657 Score E Sequences producing significant alignments: (Bits) Value AT2G41960.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 5360 0.0 AT3G58050.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1218 0.0 > AT2G41960.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast hits to 7260 proteins in 458 species: Archae - 17; Bacteria - 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses - 38; Other Eukaryotes - 4487 (source: NCBI BLink). | chr2:17514118-17519293 REVERSE LENGTH=4052 Length=4052 Score = 5360 bits (2902), Expect = 0.0 Identities = 3441/3691 (93%), Gaps = 77/3691 (2%) Strand=Plus/Plus Query 1 ATGAACAAATACAAGTGTAAAACGATGCCGGGTTTAAC-ACACATGAAT-AATGAGCATT 58 |||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| Sbjct 279 ATGAACAAATACAAGTGTAAAACGATGCCGGGTTTAACAACACA--CATGAATGAGCATT 336 Query 59 ACTCTTCTCCTGGGTTTTGGTCTGAGGACGAAGATGGTGTTACCTACGATCAGTTGGACG 118 |||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 337 ACTCTTCTTCTGGGTTTTGGTCTGAGGACGACGATGGACTTACCTACGATCAGTTGGACC 396 Query 119 AGTTCTGGAGTGAGCTGTCGCCTAAAGCTAGGCAGGAGCTTCTTAGGATTGACAAGCAGG 178 |||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||| Sbjct 397 AGTTCTGGAGTGAGCTGTCGTCGAAAGCTAGGCATGAGCTTCTTAGGATTGACAAGCAGA 456 Query 179 CTCTATTTGAGCAAGCTCGTAAGAACCTGTGCTGTTCCAGATGCCTTGGCCTGCTGCTTG 238 | || |||||||||||||| |||||| |||||||||||||||||||||| ||| |||||| Sbjct 457 CACTGTTTGAGCAAGCTCGCAAGAACATGTGCTGTTCCAGATGCCTTGGACTGTTGCTTG 516 Query 239 AAGGCTTCGTGCAGATTGTTTCTACTGGGAGGGCCGCATACGATAAAAGATTTCCTTGCA 298 ||||||||| |||||| ||||| ||||||||||||| ||||| |||| | | | Sbjct 517 AAGGCTTCGCCCAGATTCTTTCTGCTGGGAGGGCCGCGTACGA-AAAA-A-------G-A 566 Query 299 ACAAATCAGGAGCCTCTAAAGATCAAATTAACGGTAAATC-AGTTGGCACTAGGAAATGT 357 | || ||| |||| |||| | |||| ||||||| | |||||||||||||||| Sbjct 567 A-TGAT-GGGACCCTCCAAAG-----A-TAACTGTAAATCTA-ATGGCACTAGGAAATGT 617 Query 358 ACGGTTGCGTACCAGAGCCCTGCTATTCATCGATGGGGAGGTCTCACCACAACACGCGAC 417 ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct 618 ACGGTTGCGTACCAGAGCCCTCCTGTTCATCGATGGGGAGGTCTCACCACAACACGC-TC 676 Query 418 -GGATGTCTCACACTTCTTGACTGCTTTTTGAATGCAAAAACTTTCAAAGGGCTTCAAAC 476 |||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 677 GGGATGTATCACTCTTCTTGACTGCTTTTTGACTGCAAAAACTTTCAAAGGGCTTCAAAA 736 Query 477 TGTGTTTGAAAGTGCCCGTGCTCGAGAGAGGGAACGTGAATTGCTTTATCCTGATGCTTG 536 ||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 737 TGTCTTTGAAAGTAACCGTGCTCGAGAGAGGGAACGTGAGTTGCTTTATCCTGATGCTTG 796 Query 537 TGGTGGCGGAGGTCGGGTATGGCTTAGTCAAGGGATTGCTGGTTTTGGTAAAGGTCATGG 596 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 797 TGGTGGCGGTGGTCGGGTATGGCTTAGTCAAGGGATTGCTGGTTTTGGTAAAGGTCATGG 856 Query 597 AACAAGAGAAACATGTGCTTTGCATACCACGAGGCTCTCTTGTGATACATTAGTGGATTT 656 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 857 AACAAGAGAAACATGTAATTTGCATACCACGAGGCTCTCTTGTGATACATTAGTGGATTT 916 Query 657 TTGGTCTGCACTTGAAGAGCAAAGTCGACAGTCACTTTTGAGGATGAAAGAAGAGGATTT 716 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 917 TTGGTCTGCACTTGAAGAGCATAGTCGACAGTCACTTTTGAGAATGAAAGAAGAGGATTT 976 Query 717 TGTGGAAAGACTAACTTACAGATTCGACTGCAAGAAGTTTTGTAGAGACTGCAGAAGAAA 776 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 977 TGTGGAAAGACTAACTTACAGATTCGACTGCAAGAAGTTTTGTAGAGACTGCCGAAGAAA 1036 Query 777 TGTTATTCGGGAGTTTAAAGAACTTAAGGAACTTAAACGAATGCAGAGAGAACCAAGATG 836 ||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1037 TGTCATTCGGGAGTTTAAAGAACTTAAGGAACTTAAACGAATACAGAGAGATCCAAGATG 1096 Query 837 TACCGACTGGTTTTGTGTTGCCGATACAGCCTTTCAGTATGAGGTGGACATTGATTCCGT 896 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1097 TACCGACTGGTTTTGTGTTGCCGATACAGCCTTTCAGTATGAGGTGGACATTGATTCTGT 1156 Query 897 CCGAGCAAATTGGAGTCAACATTTTACAGAGAATGCTGGATATCATCAATTCGAGTGGGC 956 ||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct 1157 CCGAGCAGATTGGAGTCAATATTTTACAGAGAATGCTGGATATCATCATTTCGAGTGGGC 1216 Query 957 TATTGGAACTGGAGAAGGCGAATCTGATATCCGCGAGTTCAAATACGTAGGCAATGATCG 1016 ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 1217 TATTGGAACAGGAGAAGGCGAATCTGATATCCTCGAGTTCAAATATGTAGGCAATGATCG 1276 Query 1017 GAGTGCCCAAGTCAATGGCCTAGACCTTCGTGGATTACACGAATGCTACATTACTCTTAG 1076 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1277 GAGTGCCCGAGTCAATGGCCTAGACCTTCGTGGATTACATGAATGCTACATTACTCTTAG 1336 Query 1077 GGCTTTTaaaaaaaaTGGCCGCTCCTCGGAAATATCTGTCAAAGCCCATGCATTGAGAGG 1136 ||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 1337 GGCATTTAAAAAAAATGGCCGCCCCTCAGAAATATCTGTCAAAGCCCATGCATTGAGAGG 1396 Query 1137 CCAACAGTGCGTTCACTCCAGGCTTGTGGTTGGGGATGGCTTTGTTTCAATTAAAAGAGG 1196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1397 CCAACAGTGCGTTCACTCCAGGCTTGTGGTTGGGGATGGCTTTGTTTCAATTAAAAGAGG 1456 Query 1197 GGAATGCATTCGAATGTTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGT 1256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1457 GGAATGCATTCGAATGTTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGT 1516 Query 1257 CATGATAGACAAAGATGGAAATGAGCTTGATGGTGAGTGCTTGCGTCCACAAAAGCATGC 1316 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1517 CCTGATAGACAAAGATGGAAATGAACTTGATGGTGAGTGCTTGCGTCCACAAAAGCATGC 1576 Query 1317 TAAGAGTCCAGAACTTGCTCGAGAGTTTCTTCTAGATGCTGCAACGGTTATTTTCAAGGA 1376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1577 TAAGAGTCCAGAACTTGCTCGAGAGTTTCTTCTAGATGCTGCAACGGTTATTTTCAAGGA 1636 Query 1377 GCAGGTTGAAAAGGCATTTAGGGATGGTACAGCCCGTCAAAATGCACACAGTATATTTGT 1436 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1637 ACAGGTTGAAAAGGCATTTAGGGATGGTACAGCCCGTCAAAATGCACACAGTATATTTGT 1696 Query 1437 CTGCCTTTCATCGAAACTATTAGAGAAACGTGTTCATATTGCCTGCAAGGAAATTGTCAC 1496 ||||||||||||| |||| |||||| |||||||||||||||||||||| |||||||| || Sbjct 1697 CTGCCTTTCATCGGAACTGTTAGAGCAACGTGTTCATATTGCCTGCAAAGAAATTGTTAC 1756 Query 1497 CTTGgagaagcagaacaaacttcttgaggaagaagagaaagaaaagcgtgaagaagagga 1556 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1757 CTTGGAGAAGCAGAACAAACTTCTCGAGGAAGAAGAGAAAGAAAAGCGTGAAGAAGAGGA 1816 Query 1557 gcgaaaagaaaggaaaagaaataaagaaaaggagaaaaaacttcgtagaaaggagagatt 1616 |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1817 GCGAAAAGAAAGGAAACGAATTAAAGAAAGGGAGAAAAAACTTCGTAGAAAGGAGAGATT 1876 Query 1617 gaaggaaaaagaacgagaaaaagagcagaagaatccaaaaTTTAGTGATAAAGCAATACT 1676 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1877 GAAGGAAAAAGAACGCGAAAAAGAGCAGAAGAATCCAAAATTTAGTGATAAAGCAATACT 1936 Query 1677 GCCAAATATGTCAAGGGAAGAAGAATGCTCTCCAAATCTTGATGAGGAAAATAACAATAC 1736 ||||| ||||||||||||||||||| |||||| ||||||||||||||| | ||||||||| Sbjct 1937 GCCAATTATGTCAAGGGAAGAAGAAGGCTCTCGAAATCTTGATGAGGACACTAACAATAC 1996 Query 1737 CATAAGATGCGAGGAGTCCGGAATTGAAAATGGAAATGTAGATTTGTCTTCACCTGGTTC 1796 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1997 CATAAGATGCGAGGAGTCCGGAATTGAAAATGGAGATGTAGATTTGTCTTCACCTGGTTC 2056 Query 1797 TCCTGATGATCAAGATGAAGAGTGTTTGGATGGTTGCGCTTCTCCAAGAGCTGAAACCCA 1856 ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 2057 TCCTGATGATCAAGATGAAGAGTGTTTGGATGGTTGCATTTCTCCAAGAGTTGAAACCCA 2116 Query 1857 CTCTTGTGATAGCACTGATAGGGAGATTATAGATCATGAAGATGAAAACGGCTGCTTTAC 1916 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2117 CTCTTGTGATAGCACTGATAAGGAGATTATAGATCATGAAGATGAAAACGGCTGCTTTAC 2176 Query 1917 ACATGAAAATCCAAGACCTGCTCATCAGACAGCAAGATTATGGAAAGAGGCTCAGACTGA 1976 || | ||||||||||||| |||| || |||||||||||||||| ||||||||| Sbjct 2177 AC--------C-AAGACCTGCTCATAAGACGGCGAGATTATGGAAAGAGGTTCAGACTGA 2227 Query 1977 TCATGCTTTGAGATGGTCAGAAAAACGCAGATTTACAGAGAATGCTTCTTCTGTCAGTAG 2036 |||| ||||||| | ||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 2228 TCATTCTTTGAGGTTGTCAGAAAAACGCAGATTTACAGAGAAAACTTCTTTTGTCAGTAG 2287 Query 2037 TGCTGAGGCAGGATACTGTAATGATAGATTAGAAATGCCTTCACGACACTTCAATGGGTC 2096 | ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| || Sbjct 2288 TTCTGAGGCAGGATACTGTAATGATAGATTAGAAATGTCTTCGGGACACTTCAATGGCTC 2347 Query 2097 AGATAAAAATTTGAGAGTGAAAGCTTTGAAAACTGGTGGTAGCCCAGATAGCATTAGGTC 2156 |||||||||| ||||||||||||||| |||| |||||||||||||| |||||| |||||| Sbjct 2348 AGATAAAAATGTGAGAGTGAAAGCTTCGAAAGCTGGTGGTAGCCCAAATAGCAGTAGGTC 2407 Query 2157 TCATGAGGAGTTTCAGTGTTCAGACGACAGGACTGGGGAGAGGTATGATCACCATTCTTG 2216 |||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||| Sbjct 2408 TCATGAGGAGTTTCAGTGTTCAGATGGCAGGACTGGTGAGAGGTATGATTACCATTCTTG 2467 Query 2217 CAGTTGCAAACCCATTAATGGTTACCGGGAAAATGTAGAGTCTAAT-CTATCTGCAACCA 2275 ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| Sbjct 2468 CAGTTGCAAACCCATTAATGGTTACCGGGAAAAGGTAGAGTCTAATAC-ATCTGCAACCA 2526 Query 2276 GAGGCATGCGAGAACCCAAATCAG-A---------G--TCTGATCTGGATGTCTCCAAGC 2323 |||||||||||||||| ||||||| | | |||||||||||||||||||||| Sbjct 2527 GAGGCATGCGAGAACCGAAATCAGTATTCAAATCTGACTCTGATCTGGATGTCTCCAAGC 2586 Query 2324 TTAACCGAGCCAATAGGTATAATCAATCAGGCTATAGACGAGAGATAAGAAGTAAAATGA 2383 ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 2587 TTAACCGAGCCAATAGGTATACTCAATCAGGCTATAGACGAGAGATAAGAAGCAAAATGA 2646 Query 2384 ATAACAGTCGAAACGCTTGTAAGATGGATCCAGTAAATGCGAGAAAGGTCTTGGACTCCG 2443 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 2647 ATAATAGTCGAAACGCTTGTAAGATGGATCCAGTAAATGTGAGAAAGGTCTTGGACTCTG 2706 Query 2444 TGGAGCTGAAGCATCCACGAAACAGCTCAAACTCTGACGTATCATCACTTACATGTTCAA 2503 |||||| ||||||| ||||||||||||||| ||||||||||| |||||||||| | Sbjct 2707 TGGAGCCGAAGCATTCACGAAACAGCTCAACCTCTGACGTATTATCACTTACA-----A- 2760 Query 2504 CATACAAGGCAGAAGAGATTGAAGATGTAAGTCCCATTGTGAAGTCAGCTTGCACACTGT 2563 ||||||| |||||||||||| ||||||||||||||| ||||||| ||||| |||||| || Sbjct 2761 CATACAAAGCAGAAGAGATTAAAGATGTAAGTCCCACTGTGAAGCCAGCTGGCACACCGT 2820 Query 2564 CTCTATGCAAGGCTACAGATAAGTTGGGTAATGGGAATCTTAATAATTCAACCGAGGTAG 2623 |||||||||||||||||||||||||||| ||||||| | |||||||||| || ||||||| Sbjct 2821 CTCTATGCAAGGCTACAGATAAGTTGGGAAATGGGAGTTTTAATAATTCGACGGAGGTAG 2880 Query 2624 ACAAGA---TGGAAGTTCACATAACACTGAAGAATGATTACCTGTACTCGAAAGATCCTA 2680 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2881 ACAAGAAGATGGAAGTTCACATAACACTGAAGAATGATTACCTGTACTCGAAAGATCCTA 2940 Query 2681 TGATGAGTAGAACTTCCACTTCTTCAAACAACGGAAACATTGAATCCTCCTCGTTGTCTG 2740 |||||||||||| ||| | ||| |||||| |||||||| |||||||||||| |||||| Sbjct 2941 TGATGAGTAGAAGTTCTAGTTC---AAACAATGGAAACATCGAATCCTCCTCGATGTCTG 2997 Query 2741 ATTCCGAAGATGCCAGTCAGCAATCTGAAGGAAGAGAGAATCTAGTGGATA-T--G--C- 2794 ||||||||| ||||||||||||||||||||||||||||||||||||||||| | | | Sbjct 2998 ATTCCGAAGTTGCCAGTCAGCAATCTGAAGGAAGAGAGAATCTAGTGGATACTCAGAACG 3057 Query 2795 -----CC-GACTGTCACGAGAAGATGGTAGAGAAAGTGACAGAGATGAGTATGGATGAAA 2848 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3058 ATATGCCCGACTGTCACGAGAAGATGGTAGAGAAAGTGACAGAGATGAGTATGGATGAAA 3117 Query 2849 GAGATGTTTTAAGGATTAAGAATATGTCTAACCTTCCAGCTGACAACGGGGAAAGTAAAT 2908 |||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 3118 GAGATGTTTTAAAGATTAAGAATATATCTAACCTTCCAGCAGACAACGGGGAAAGTAAAT 3177 Query 2909 TATCAGGAACTCCTTTTGTGGTTCCTAGCCAAAACATGGAAAATATGGTACCTGGTGTTA 2968 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| Sbjct 3178 TATCAGGAACTCCTTTTATGGTTCCTAGCCAAAACATGGAAAATATGGTACCAGGTCTTA 3237 Query 2969 ATACTGGTTCCTACCTATCCCAGCCACAAAACATGATGTTCCCCCAGATGCTTAACCAGA 3028 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 3238 ATACTGGTTCCTACCTGTCCCAGCCACAAAACATGATACTCCCCCAGATGCTTAACCAGA 3297 Query 3029 GTATACCATTGCCAGTCTTCCAGACTCCTTCAACAATGGGTTACTATCATCAAGCTCCAG 3088 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 3298 GTATACCATTGCCAGTCTTCCAGGCTCCTTCAACAATGGGTTACTATCATCAAGCTCCAG 3357 Query 3089 TCTCTTGGTCTTCAGCTCCAGCCAACGGATTAATGCAATTCCCTCATCCTAACCATTATG 3148 ||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct 3358 TCTCTTGGTCTTCAGCTTCAACCAACGGATTAATGCAATTCCCTCATCCTAACCACTATG 3417 Query 3149 TATACACTGGTCCTCTTGGATACAGTCTGAATGGAGAGTCTCCTTTATGCGTGCAGTACG 3208 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3418 TATACACTGGTCCCCTTGGATACAGTCTGAATGGAGAGTCTCCTTTATGCATGCAGTACG 3477 Query 3209 GGACCCCATTGAGCCATTCAGCAGCCCCTTTCTTCAATTCCGGGCCAGTTCCAGTTTTCC 3268 |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct 3478 GGACCCCATTGAACCATTCAGCAGCTCCTTTCTTCAATTCCGGGCCAGTTCCAATTTTCC 3537 Query 3269 ATCCGTATGCTGAAACCACCACAATGAACACTGTTGACCAAGCTCAAGCTCTTGAGCCAT 3328 |||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 3538 ATCCGTTTGCTGAAACCAACACAATGAACACTGTTGACCAAGCTCAACCTCTTGAGCCAT 3597 Query 3329 TGGAACACAGTTTTCTGAAGGAAGCAAATGAGAGGA-AGTTAAACGAAATGCCTCCAATG 3387 |||||||||||||| ||||||||||||||||||||| | |||| |||||||||| |||| Sbjct 3598 TGGAACACAGTTTTTTGAAGGAAGCAAATGAGAGGAGATTTAA-CGAAATGCCTTTAATG 3656 Query 3388 GAAACTCCAAGGAGAGGAGGTCTACAA-CATGATAGTGATGAGAACTTCTCCTTGTTCCA 3446 ||||||||||||| | || ||| |||| | |||||||||||||||||||||||||||||| Sbjct 3657 GAAACTCCAAGGAAAAGATGTCCACAAAC-TGATAGTGATGAGAACTTCTCCTTGTTCCA 3715 Query 3447 CTTTGGTGGCCCGGTTGCTCTGTCCACAGGAAGTAAATCGAATCCTGCTCGTTCGAAAGA 3506 ||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| Sbjct 3716 CTTTGGTGGCCCGGTTGCTCTGTCCACAGGAAGTAAAGCGAATCCTGCTCGATCCAAAGA 3775 Query 3507 TGGGATTTTGGGGGATTTCTCGTTGCAATTCTCAGGAGATCATGTTTTTAGTGATCCAAC 3566 ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 3776 TGGGATTTTGGAGGATTTCTCGTTGCAGTTCTCAGGAGATCATGTTTTTGGTGATCCAAC 3835 Query 3567 CGGCAATAGCAAGAAGGAGAAGGAGAACACAGTTGGTGAAGAGTACAACTTGTTTGCGAA 3626 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 3836 CGGCAATAGCAAGAAGGAGAAAGAGAACACAGTTGGTGAAGAGTACAACTTGTTTGCGAC 3895 Query 3627 AAGTAACAGTTTGAGGTTTTCTATCTTCTAA 3657 ||||||||||||||||||||||||||||||| Sbjct 3896 AAGTAACAGTTTGAGGTTTTCTATCTTCTAA 3926 > AT3G58050.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast hits to 8116 proteins in 546 species: Archae - 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI BLink). | chr3:21492539-21497157 FORWARD LENGTH=3769 Length=3769 Score = 1218 bits (659), Expect = 0.0 Identities = 1301/1603 (81%), Gaps = 75/1603 (5%) Strand=Plus/Plus Query 731 CTTA-CAGATTCGACTGCAAGAAG-TTTTGTAGAGACTGCAGAAGAAATGTTATTCGGGA 788 |||| || ||||||| ||||| || |||||||||||||||||| |||| |||||||| || Sbjct 802 CTTACCAAATTCGACAGCAAG-AGATTTTGTAGAGACTGCAGACGAAACGTTATTCGTGA 860 Query 789 GTTTAAAGAACTTAAGGAACTTAAACGAATGCAGAGAGAACCAAGATGTACCGAC-TGGT 847 ||| ||||| ||||||||||| |||||||||| ||||||||| | |||||| || |||| Sbjct 861 GTTCAAAGAGCTTAAGGAACTGAAACGAATGCGGAGAGAACCTCGGTGTACC-ACATGGT 919 Query 848 TTTGTGTTGCCGATACAGCCTTTCAGTATGAGGTGGACATTGATTCCGTCCGAGCAAATT 907 ||||||||||| ||||| | || || |||||||| ||||||||| || |||| | | Sbjct 920 TTTGTGTTGCCAATACAACATTCCAATATGAGGTATCCATTGATTCGGTGAAAGCAGACT 979 Query 908 GG-AGTCAACATTTTACAGAGAATGCTGG--A-TATCATCAATTCGAGTGGGCTATTGGA 963 || | ||| |||| | ||||||||||| | || ||||| || |||||||| |||||| Sbjct 980 GGCGGGAAAC-TTTTTCTGAGAATGCTGGAAAGTACCATCACTTTGAGTGGGCAATTGGA 1038 Query 964 ACTGGAGAAGGCGAATCTGATATCCGCGAG-TTCAAATACGTAGGCAATG-ATCGGAGTG 1021 | |||||||| ||| |||||||| | || || ||| | || ||| ||| || |||| | Sbjct 1039 TCCGGAGAAGGAAAATGTGATATCCTCAAGTTTGAAA-ATGTTGGC-ATGAATGGGAGAG 1096 Query 1022 CCCAAGTCAATGGCCTAGACCTTCGTGGATTACACGAATGCTACATTACTCTTAGGGCTT 1081 ||||||||||||||| |||||||||| ||| | |||||||||||| ||||| |||| Sbjct 1097 TTCAAGTCAATGGCCTAAACCTTCGTGGTTTAAATTCATGCTACATTACCCTTAGAGCTT 1156 Query 1082 TTaaaaaaaaTGGCCGCTCCTCGGAAATATCTGTCAAAGCCCATGCATTGAGAGGCCAAC 1141 |||| | ||||||||| || ||| |||| | ||||||||||||||| | ||| ||| Sbjct 1157 ATAAATTAGATGGCCGCTGGTCTGAAGTATCCGCCAAAGCCCATGCATTAAAAGGTCAAA 1216 Query 1142 AGTGCGTTCACTCCAGGCTTGTGGTTGGGGATGGCTTTGTTTCAATTAAAAGAGGGGAAT 1201 | || |||||| |||||| || ||||||||||||||||||||||| || ||||| ||| Sbjct 1217 ACTGTGTTCACGGCAGGCTAGTAGTTGGGGATGGCTTTGTTTCAATCAAGAGAGGTGAAA 1276 Query 1202 GCATTCGAATGTTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGTCATGA 1261 |||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1277 GCATCCGAAGGTTTTTTGAGCATGCTGAAGAGGCTGAGGAAGAAGAGGATGAAGACATGA 1336 Query 1262 TAGACAAAGATGGAAATGAGCTTGATGGTGAGTGCT-TGCGTCCACAAAAGCATGCTAAG 1320 | ||||||||||| |||||||| ||||| || |||| | ||||||||||||||||| || Sbjct 1337 TGGACAAAGATGGGAATGAGCTCGATGGGGAATGCTCT-CGTCCACAAAAGCATGCAAAA 1395 Query 1321 AGTCCAGAACTTGCTCGAGAGTTTCT-TCTAGATGCTGCAACGGTTATTTTCAAGGAGCA 1379 |||||||||||||||||||||||||| | ||||||||||||| |||||||| || || || Sbjct 1396 AGTCCAGAACTTGCTCGAGAGTTTCTAT-TAGATGCTGCAACAGTTATTTTTAAAGAACA 1454 Query 1380 GGTTGAAAAGGCATTTAGGGATGGTACAGCCCGTCAAAATGCACACAGTATATTTGTCTG 1439 ||||||||| ||||| ||||| || || || || ||||||||||| ||||| ||||| || Sbjct 1455 GGTTGAAAAAGCATTCAGGGAGGGAACCGCTCGGCAAAATGCACATAGTATCTTTGTATG 1514 Query 1440 CCTTTCATCGAAACTATTAGAGA-AACGTGTT-CATATTGCCTGCAAGGAAATTGTCACC 1497 ||| ||| |||||||||||| | ||| | || ||| ||||||||||||||||| | ||| Sbjct 1515 TCTTACATTGAAACTATTAGA-ACAACAT-TTACATGTTGCCTGCAAGGAAATTATTACC 1572 Query 1498 TTGgagaagcagaacaaacttcttgaggaagaagagaaagaaaagcgtgaagaagaggag 1557 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1573 TTGGAGAAACAGGTGAAACTTCTTGAGGAAGAAGAGAAAGAAAAGCGTGAAGAAGAGGAG 1632 Query 1558 cgaaaaga-aaggaaaagaaataaagaaaaggagaaaaaacttcgtagaaaggagagatt 1616 || || || ||| |||||| ||||| | ||||||||||||||| | |||||||||||| Sbjct 1633 CGGAAGGAGAAG-AAAAGATCCAAAGAGAGGGAGAAAAAACTTCGCAAAAAGGAGAGATT 1691 Query 1617 gaaggaaaaagaacga-gaaaaagagcagaagaatccaaaaTTTAGTGATAAAG-CAATA 1674 |||||||||||| | | | || ||| |||| || || ||| ||| ||||||| || | Sbjct 1692 GAAGGAAAAAGA-CAAAGGCAAGGAGAAGAAAAACCCTGAATGTAGCGATAAAGACA-TG 1749 Query 1675 CTGCCAAATATG-TCAAGGGAAGAAGAATGCTCT-CCAAATCTTGATGAGGAAAATAACA 1732 |||| ||| | ||||||||||||||| | ||| ||||| ||| |||| || | |||| Sbjct 1750 CTGCTGAAT-TCATCAAGGGAAGAAGAA-GATCTTCCAAACCTTTATGATGAGACGAACA 1807 Query 1733 ATACCATAAG-ATGCGAGGAGTCCGGAATTGAAAATGGAAATGTAGATTTGTCTTCACCT 1791 ||||||||| | |||||||||| | |||||||| || ||| |||||||||| ||||| Sbjct 1808 ATACCATAAACA-GCGAGGAGTCAGAAATTGAAACGGGGTATGCAGATTTGTCTCCACCT 1866 Query 1792 GGTTCTCCTGATGATCAAGATGAAGA--GTGTTTGGATGGTTGCGCTTCTCCAAGAGCTG 1849 ||||||||||||| |||||| |||| |||||||||||||||| ||||||||||||| | Sbjct 1867 GGTTCTCCTGATGTTCAAGA--AAGACAGTGTTTGGATGGTTGCCCTTCTCCAAGAGCGG 1924 Query 1850 AAACCCACT-CTTGTGATAGCAC-TGATAGGGAGATTATAGATCATGAAGATGAAAACG- 1906 ||| ||||| || |||| || || ||| || || |||| ||||| ||||||||| || | Sbjct 1925 AAAACCACTACT-GTGACAG-ACCTGACAGAGATATTAAAGATCTTGAAGATGAGAATGT 1982 Query 1907 GCTGCTTTACACATGAAAATCCAAGACCTGCTCATCAGA-CAGCAAGATTAT-GGAAAGA 1964 | | ||||||| |||| ||| || ||||| ||| |||| | ||||||| || ||||||| Sbjct 1983 G-TACTTTACAAATGATCATCAAAAACCTGTTCACCAGAAC-GCAAGAT-ATTGGAAAGA 2039 Query 1965 GGCT-CAGACTGATCATGCTTTGAGATGGTCAGAAAAACGCAGAT-TTACAGAGAATGCT 2022 | | ||| ||||| |||||||||| |||||||| |||||||||| || |||| |||||| Sbjct 2040 AG-TGCAGTCTGATAATGCTTTGAGGTGGTCAGATAAACGCAGATATT-CAGATAATGCT 2097 Query 2023 TCTTCTGTCAGTAG-TGCTGAGGCAGGATACTGTAATGATAGATTAGAAATGCCTTCACG 2081 |||| ||||||||| | | |||||| ||||| ||||||||||||||||| |||||||| | Sbjct 2098 TCTTTTGTCAGTAGGT-CAGAGGCAAGATACCGTAATGATAGATTAGAAGTGCCTTCAAG 2156 Query 2082 AC-ACTTCAATGGGTCAGATAAAAATTTGAGAGTGAAAGCTTTGAAA-ACTGGTGGTAGC 2139 | |||||||||||| | | | | || |||||||| |||| ||| |||||||| | Sbjct 2157 GGGA-TTCAATGGGTCAAACAGACAGTTAAGAGTGAATGCTTC-AAAGACTGGTGG---C 2211 Query 2140 CCAGA-TAGCATTAGGTCTCATGAGGAGTTTCAGTGTT-CAGACGACAGGA-CTGGGGAG 2196 | || | | || | |||||||||| ||||||| |||| | ||| |||| | | | | || Sbjct 2212 CT-GAATGGTATCAAGTCTCATGAGAAGTTTCAATGTTGC-GACAACAGAATCAGTG-AG 2268 Query 2197 AGGTATGATCACCA-TTCTTGCAGTTGCAAACCCA-TTAATGGTTACCGGG-AAAATGTA 2253 |||| ||| | || |||||||||||||||||| | || || || |||| |||| ||| Sbjct 2269 AGGTTTGA-CTTCAGTTCTTGCAGTTGCAAACCAAGTTG-TGAATATCGGGCAAAA-GTA 2325 Query 2254 GAGTCTAAT-CTATCTGCAACCAGAGGCATGCGAGAACCCAAA 2295 || |||| | ||| | ||||| ||| ||||||||| ||| Sbjct 2326 GAACCTAAAACCG-CTGGATCCAGAAGCACGCGAGAACCAAAA 2367 Score = 106 bits (57), Expect = 2e-21 Identities = 77/87 (89%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 2700 TTCTTCAAACAACGGAAACATTGAATCCTCCTCGTTGTCTGATTCCGAAGATGCCAGTCA 2759 ||| |||||||||||||||| |||||||||||| |||||||| ||||| |||||||| Sbjct 2829 TTCGTCAAACAACGGAAACACTGAATCCTCCTCCACATCTGATTCTGAAGACGCCAGTCA 2888 Query 2760 GCAATCTGAAGGAAGAGAGAATCTAGT 2786 |||||||||||||||||||| | |||| Sbjct 2889 GCAATCTGAAGGAAGAGAGAGTATAGT 2915 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 182106003090 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5