BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323056
Length=1059
Score E
Sequences producing significant alignments: (Bits) Value
AT3G32980.1 | Symbols: | Peroxidase superfamily protein | chr3... 1688 0.0
AT3G49120.1 | Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34 | ... 994 0.0
AT3G49110.1 | Symbols: PRX33, PRXCA, ATPRX33, ATPCA | peroxidas... 913 0.0
> AT3G32980.1 | Symbols: | Peroxidase superfamily protein | chr3:13526097-13529997
REVERSE LENGTH=1414
Length=1414
Score = 1688 bits (914), Expect = 0.0
Identities = 1009/1056 (96%), Gaps = 2/1056 (0%)
Strand=Plus/Plus
Query 1 ATGAATTTCTCTTATTCTTCTTTGTCAACTTTGACAACCCTAATAACATTGGGTTGTCTT 60
|||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||
Sbjct 49 ATGAATTTCTCTTATTCTTCCTTGTCAACTTGGACAACCCTAATGACATTGGGTTGTCTT 108
Query 61 CTGCTTCATTCATCCAATTCCAGTGCTCAGCTAACCCCAACCTTCTATGACAATACATGC 120
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 109 CTGCTTCATTCATCCATTTCCAGTGCTCAGCTAACCCCAACTTTCTATGACAATACATG- 167
Query 121 CCCAA-CGTCTTTACCATCGTACGGAACACCATCGTAAACGAGCTAAGATCAGATCCTCG 179
|||| ||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||
Sbjct 168 TCCAAGCGTCTTTACCATCGTACGGGATACCATAGTAAACGAGCTAAGATCGGATCCTCG 227
Query 180 TATCGCTGCAAGCATCCTTCGTCTTCACTTCCACGACTGCTTCGTCAATGGCTGTGATGC 239
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 228 TATCGCTGCAAGCATCCTTCGTCTTCACTTCCACGACTGTTTCGTCAATGGCTGTGATGC 287
Query 240 ATCGATTCTGTTAGACAACACAACATCCTTTCAAACTGAGAAAGACGCTGCTCCAAACGC 299
|||||| ||||||||||||||||||||||||| ||| |||||||| || |||||||||||
Sbjct 288 ATCGATCCTGTTAGACAACACAACATCCTTTCGAACAGAGAAAGATGCGGCTCCAAACGC 347
Query 300 AAACTCGGCTCGAGGATTTCCAGTGATTGATAGAATGAAAGCAGCAGTAGAGACAGCATG 359
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 348 AAACTCGGCTCGAGGATTTCCAGTGATCGATAGAATGAAAGCAGCAGTAGAGACAGCATG 407
Query 360 TCCAAGGACTGTTTCATGCGCAGATATACTTACCATCGCAGCTCAACAATCTGTAAATCT 419
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 408 TCCAAGGACTGTTTCATGCGCAGATATACTTACCATCGCAGCTCAACAAGCTGTAAATTT 467
Query 420 GGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGGAGAAGAGATAGCTTACAAGCATTCTT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 GGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGGAGAAGAGATAGCTTACAAGCATTCTT 527
Query 480 TGCTCTCGCTAATGCAAATCTTCCCGCTCCATTTTTCACGCTCCCACAACTTAAGGCTAG 539
||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct 528 TGCTCTCGCTAATACAAATCTTCCCGCTCCATTCTTCACTCTCCCACAACTTAAGGCCAG 587
Query 540 CTTTCAAAATGTTGGACTTAACCGTCCCTCTGATCTCGTTGCACTCTCTGGTGGTCACAC 599
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 588 TTTTCAAAATGTTGGACTTGACCGTCCCTCTGATCTCGTTGCACTCTCTGGTGGTCACAC 647
Query 600 ATTTGGTAAAAACCAATGCCAATTTATTATGGATAGGCTATACAACTTTAGCAACACTGG 659
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 648 ATTTGGTAAAAACCAGTGCCAATTTATTATGGATAGACTATACAACTTTAGCAACACTGG 707
Query 660 TTTACCCGACCCTACTCTTAATACTACATACCTCCAGATACTTCGTGGACAATGTCCCCG 719
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 708 TTTACCCGACCCTACTCTTAATACTACATACCTCCAGACACTTCGTGGACAATGTCCCCG 767
Query 720 GAATGGTAATCAGACCGTCTTGGTCGATTTCGATTTTCGTACACCGACGGTTTTTGACAA 779
|||||||| ||||||||||| || ||||||||| | || ||||||||||||||||||||
Sbjct 768 CAATGGTAACCAGACCGTCTTAGTTGATTTCGATCTACGCACACCGACGGTTTTTGACAA 827
Query 780 TAAATACTATGTGAATCTGAAAGAGCTAAAGGGACTTATCCAGACCGATCAAGAGTTGTT 839
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 828 TAAATACTATGTGAATCTGAAAGAGCTAAAGGGACTTATCCAGACGGATCAAGAGTTGTT 887
Query 840 TTCCAGCCCTAATGCCACTGACACAGTCCCCTTGGTGAGAGAATATGCCGATGGCACTCA 899
||||||||||||||||||||||||| ||||||||||||||||||| || |||||||||||
Sbjct 888 TTCCAGCCCTAATGCCACTGACACAATCCCCTTGGTGAGAGAATACGCTGATGGCACTCA 947
Query 900 AAAATTCTTCAATGCTTTTGTTGAAGCCATGAATAGGATGGGAAACATTACACCTCTCAC 959
||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct 948 AAAATTCTTCAATGCTTTTGTGGAAGCAATGAATAGAATGGGAAACATTACACCTCTCAC 1007
Query 960 TGGAACTCAAGGACAAATCAGACAGAATTGTAGGGTGGTCAACTCCAACTCGCTGCTACA 1019
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1008 TGGAACTCAAGGACAAATCAGACAGAATTGTAGGGTGGTTAACTCCAACTCGCTGCTACA 1067
Query 1020 TGATGTGGTTGAAATTGTTGACTTTGTCAGCTCTAT 1055
||||||||| ||||| ||||||||||||||||||||
Sbjct 1068 TGATGTGGTCGAAATCGTTGACTTTGTCAGCTCTAT 1103
> AT3G49120.1 | Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34
| peroxidase CB | chr3:18207651-18210132 FORWARD LENGTH=1321
Length=1321
Score = 994 bits (538), Expect = 0.0
Identities = 901/1075 (84%), Gaps = 29/1075 (3%)
Strand=Plus/Plus
Query 1 ATGAATTTCTCTTATTCTT---CTTTGTCAACTTTGACAACCCTAATAACATTGGGTTGT 57
||| ||||||||| |||| | | ||| |||| ||||| | |||| |||||||| |||
Sbjct 169 ATGCATTTCTCTTCGTCTTCAACATCGTCCACTTGGACAATCTTAATCACATTGGGATGT 228
Query 58 CTTCTGCTTCATTCATCCAAT-TCCAG-TGCTCAGCTAACCCCAACCTTCTATGACA-AT 114
||| |||||||| ||| | | ||| | |||||| || ||||| |||||||| || | |
Sbjct 229 CTTATGCTTCATGCAT-CTTTGTCC-GCTGCTCAACTCACCCCTACCTTCTACGATAGGT 286
Query 115 ACATGCCCCAACGTCTTTACCATCGTACG-GAACACCATCGTAAACGAGCTAAGATCAGA 173
|||| || || ||| || ||||||||| ||| ||||| ||||| ||| |||| || ||
Sbjct 287 -CATGTCCTAATGTCACTAACATCGTACGAGAA-ACCATTGTAAATGAGTTAAGGTCGGA 344
Query 174 TCCTCGTATCGCTGCAAGCATCCTTCGTCTTCACTTCCACGACTGCTTCGTCAATGGCTG 233
|||||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||
Sbjct 345 CCCTCGTATCGCTGCGAGCATCCTTCGTCTTCACTTCCACGACTGCTTTGTTAATGGTTG 404
Query 234 TGATGCATCGATTC-TGTTAGACAACACAACATCCTTTCAAACTGAGAAAGACGCTG-CT 291
||| ||||| | || ||||||||||||| ||||| |||| ||| |||||||| || | |
Sbjct 405 TGACGCATCCA-TCTTGTTAGACAACACGACATCATTTCGAACAGAGAAAGATGC-GTTT 462
Query 292 CCAAACGCAAACTCGGCTCGAGGATTTCCAGTGATTGATAGAATGAAAGCAGCAGTAGAG 351
||||||||| |||||||| ||||||||||||||||||||||||||||| || || |||
Sbjct 463 GGAAACGCAAATTCGGCTCGGGGATTTCCAGTGATTGATAGAATGAAAGCTGCGGTGGAG 522
Query 352 ACAGCATGTCCAAGGACTGTTTCATGCGCAGATATACTTACCATCGCAGCTCAACAATCT 411
| ||||| ||||| || ||||||||||||||||| || ||||| |||||||||||||||
Sbjct 523 AGGGCATGCCCAAGAACCGTTTCATGCGCAGATATGCTCACCATTGCAGCTCAACAATCT 582
Query 412 GTAAATCTGGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGGAGAAGAGATAGCTTACAA 471
|| | | |||||||||||||||||||||||||||||||||| || ||||| || ||||||
Sbjct 583 GTCACTTTGGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGAAGGAGAGACAGTTTACAA 642
Query 472 GCATTCTTTGCTCTCGCTAATGCAAATCTTCCCGCTCCATT-TTTCACGCTCCCACAACT 530
|||||| | | |||||||||||||||||||| |||||||| ||| || || ||||||||
Sbjct 643 GCATTCCTGGAACTCGCTAATGCAAATCTTCCAGCTCCATTCTTT-ACACTTCCACAACT 701
Query 531 TAAGGCTAGCTTTCA-AAATGTTGGACTTAACCGTCCCTCTGATCTCGTTGCACTCTCTG 589
||| || ||||| || ||||||||| || | ||||| |||||||||||||| ||||| |
Sbjct 702 TAAAGCCAGCTT-CAGAAATGTTGGTCTCGATCGTCCTTCTGATCTCGTTGCTCTCTCCG 760
Query 590 GTGGTCACACATTTGGTAAAAACCAATGCCAATTTATTATGGATAGGCTATACAACTTT- 648
|||||||||||||||||||||| ||||| || |||||| | || || ||||||| |||
Sbjct 761 GTGGTCACACATTTGGTAAAAATCAATGTCAGTTTATTCTTGACAGATTATACAA-TTTC 819
Query 649 AGCAACACTGGTTTACCCGACCCTACTCTTAATACTACATACCTCCAGA-TACTTCGTGG 707
|||||||| ||||||||||||||||| || || ||||| |||||||| | | ||||||||
Sbjct 820 AGCAACACAGGTTTACCCGACCCTACACTCAACACTACTTACCTCCAAACT-CTTCGTGG 878
Query 708 ACAATGTCCCCGGAATGGTAATCAGACCGT-C-TTGGTCGATTTCGATTTTCGTACACCG 765
|| ||| |||| ||||| |||| || || | ||||| ||||| ||| | ||||| ||
Sbjct 879 ACTATGCCCCCTTAATGGCAATC-GAA-GTGCCTTGGTAGATTTTGATCTACGTACGCCT 936
Query 766 ACGGTTTTTGACAATAAATACTATGTGAATCTGAAAGAGCTAAAGGGACTTATCCAGACC 825
|||||||| ||||| |||||||| |||||||| ||||||| ||| || |||||||||| |
Sbjct 937 ACGGTTTTCGACAACAAATACTACGTGAATCTCAAAGAGCGAAAAGGTCTTATCCAGAGC 996
Query 826 GATCAAGAGTTGTTTTCCAGCCCTAATGCCACTGACACAGTCCCCTTGGTGAGAGAATAT 885
|| ||||||||||| || ||||| ||||||||||||||| ||||||||||||||| ||||
Sbjct 997 GACCAAGAGTTGTTCTCTAGCCCCAATGCCACTGACACAATCCCCTTGGTGAGAGCATAT 1056
Query 886 GCCGATGGCACTCAAAAATTCTTCAATGCTTTTGTTGAAGCCATGAATAGGATGGGAAAC 945
|| |||||||| |||| |||||||||||| ||||| || || ||||||||||||||||||
Sbjct 1057 GCTGATGGCACACAAACATTCTTCAATGCATTTGTGGAGGCAATGAATAGGATGGGAAAC 1116
Query 946 ATTACACCT-CTCACTGGAACTCAAGGACAAATCAGACAGAATTGTAGGGTGGTCAACTC 1004
|||||||| || || ||||||||||||||||||||| ||| ||||| || || |||||
Sbjct 1117 ATTACACCAACT-ACAGGAACTCAAGGACAAATCAGATTGAACTGTAGAGTTGTGAACTC 1175
Query 1005 CAACTCGCTGCTACATGATGTGGTTGAAATTGTTGACTTTGTCAGCTCTATATGA 1059
|||||| ||||| ||||||||||| || || ||||||||||| |||||||| |||
Sbjct 1176 CAACTCTCTGCTCCATGATGTGGTGGATATCGTTGACTTTGTTAGCTCTATGTGA 1230
> AT3G49110.1 | Symbols: PRX33, PRXCA, ATPRX33, ATPCA | peroxidase
CA | chr3:18200664-18203142 FORWARD LENGTH=1365
Length=1365
Score = 913 bits (494), Expect = 0.0
Identities = 854/1029 (83%), Gaps = 20/1029 (2%)
Strand=Plus/Plus
Query 41 TAATAACATTGGGTTGTCTTCTGCTTCATTCATCCAATTC-CAG-TGCTCAGCTAACCCC 98
|||| ||| |||| |||||| ||||| | | | | ||| | | |||||| || |||||
Sbjct 96 TAATCACAGTGGGATGTCTTATGCTTTGTGCGT-C-TTTCTCCGATGCTCAACTTACCCC 153
Query 99 AACCTTCTATGACAATACATGCCCCAACGTCTTTACCATCGTACGGA-ACACCATCGTAA 157
|| || || |||| | |||| || | |||| | ||| ||| || | ||||| || |
Sbjct 154 TACTTTTTACGACACTTCATGTCCTACCGTCACCAACATTGTA-AGAGATACCATTGTCA 212
Query 158 ACGAGCTAAGATCAGATCCTCGTATCGCTGCAAGCATCCTTCGTCTTCACTTCCACGACT 217
||||||||||||| || ||||||||||| | ||||||||||||||||||||||| ||||
Sbjct 213 ACGAGCTAAGATCGGACCCTCGTATCGCCGGGAGCATCCTTCGTCTTCACTTCCATGACT 272
Query 218 GCTTCGTCAATGGCTGTGATGCATCGATTC-TGTTAGACAACACAACATCCTTTCAAACT 276
|||| || ||||| |||||||| |||| || ||||||||||||| ||||| |||| |||
Sbjct 273 GCTTTGTTAATGGTTGTGATGCTTCGA-TCTTGTTAGACAACACGACATCATTTCGAACA 331
Query 277 GAGAAAGACGCTGC-TCCAAACGCAAACTCGGCTCGAGGATTTCCAGTGATTGATAGAAT 335
|||||||| || | | ||| ||||| || || ||||||||||||||||||||||||||
Sbjct 332 GAGAAAGATGC-ACTTGGAAATGCAAATTCAGCCCGAGGATTTCCAGTGATTGATAGAAT 390
Query 336 GAAAGCAGCAGTAGAGACAGCATGTCCAAGGACTGTTTCATGCGCAGATATACTTACCAT 395
|||||| || || |||| ||||| ||||| || ||||||||||||||||| || |||||
Sbjct 391 GAAAGCTGCGGTGGAGAGGGCATGCCCAAGAACCGTTTCATGCGCAGATATGCTCACCAT 450
Query 396 CGCAGCTCAACAATCTGTAAATCTGGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGGAG 455
|| |||||||||||||| | | ||||||||||||||||||||| ||||||||| |||||
Sbjct 451 TGCTGCTCAACAATCTGTCACTTTGGCAGGAGGTCCTTCTTGGAAGGTTCCTTTAGGGAG 510
Query 456 AAGAGATAGCTTACAAGCATT-CTTTGCTCTCGCTAATGCAAATCTTCCCGCTCCATTTT 514
|||||| |||||||||||||| || | ||| ||||| ||||||||||| |||||||| |
Sbjct 511 AAGAGACAGCTTACAAGCATTTCTA-GATCTTGCTAACGCAAATCTTCCAGCTCCATTCT 569
Query 515 TCACGCTCCCACAACTTAAGGCTAGCTTTCAAAA-TGTTGGACTTAACCGTCCCTCTGAT 573
|||| || ||||| ||||| || | ||| ||||| |||||| || | ||||| ||||||
Sbjct 570 TCACACTTCCACAGCTTAAAGCCAACTT-CAAAAATGTTGGCCTCGATCGTCCTTCTGAT 628
Query 574 CTCGTTGCACTCTCTGGTGG-TCACACATTTGGTAAAAACCAATGCCAATTTATTATGGA 632
|| ||||| ||||| || || |||||||||||||||||| ||||| | ||| ||||||||
Sbjct 629 CTTGTTGCGCTCTCCGG-GGCTCACACATTTGGTAAAAATCAATGTCGATTCATTATGGA 687
Query 633 TAGGCTATACAACTTTAGCAACACTGGTTTACCCGACCCTACTCTTAATACTACATACCT 692
|| |||||||||||||||||||||| ||||| |||||||| || || ||||| |||||
Sbjct 688 CAGATTATACAACTTTAGCAACACTGGATTACCTGACCCTACACTCAACACTACTTACCT 747
Query 693 CCAGA-TACTTCGTGGACAATGTCCCCGGAATGGTAATCAGACCGTCTTGGTCGATTTCG 751
||| | | |||||||| |||||||| || ||||||||||| | |||||| || |||||||
Sbjct 748 CCAAACT-CTTCGTGGTCAATGTCCTCGCAATGGTAATCAAAGCGTCTTAGTGGATTTCG 806
Query 752 ATTTTCGTACACCGACGGTTTTTGACAATAAATACTATGTGAATCTGAAAGAGCTAAAGG 811
|| | ||||| || |||||| ||||| ||||||||||||||||| ||||||| ||| |
Sbjct 807 ATCTGCGTACGCCTTTGGTTTTCGACAACAAATACTATGTGAATCTTAAAGAGCAAAAAG 866
Query 812 GACTTATCCAGACCGATCAAGAGTTGTTTTCCAGCCCTAATGCCACTGACACAGTCCCCT 871
| |||||||||| ||| ||||||||||| || ||||| ||||||||||||||| ||||||
Sbjct 867 GTCTTATCCAGAGCGACCAAGAGTTGTTCTCTAGCCCCAATGCCACTGACACAATCCCCT 926
Query 872 TGGTGAGAGAATATGCCGATGGCACTCAAAAATTCTTCAATGCTTTTGTTGAAGCCATGA 931
||||||||| |||||| |||||||| |||| |||||||||||| || || || || ||||
Sbjct 927 TGGTGAGAGCATATGCTGATGGCACACAAACATTCTTCAATGCATTCGTGGAGGCAATGA 986
Query 932 ATAGGATGGGAAACATTACACCT-CTCACTGGAACTCAAGGACAAATCAGACAGAATTGT 990
||||||||||||| |||||||| || || |||||||||||||||||||| |||||||
Sbjct 987 ATAGGATGGGAAATATTACACCAACT-ACAGGAACTCAAGGACAAATCAGGTTGAATTGT 1045
Query 991 AGGGTGGTCAACTCCAACTCGCTGCTACATGATGTGGTTGAAATTGTTGACTTTGTCAGC 1050
|| ||||| ||||||||||| || || ||||||||||| || || ||||||||||| ||
Sbjct 1046 AGAGTGGTGAACTCCAACTCTCTACTCCATGATGTGGTGGATATCGTTGACTTTGTAAGT 1105
Query 1051 TCTATATGA 1059
||||| |||
Sbjct 1106 TCTATGTGA 1114
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51857162985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5