BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg324038 Length=1422 Score E Sequences producing significant alignments: (Bits) Value AT3G55080.1 | Symbols: | SET domain-containing protein | chr3:... 2012 0.0 > AT3G55080.1 | Symbols: | SET domain-containing protein | chr3:20411399-20415897 REVERSE LENGTH=1536 Length=1536 Score = 2012 bits (1089), Expect = 0.0 Identities = 1316/1426 (92%), Gaps = 14/1426 (1%) Strand=Plus/Plus Query 1 ATGCTACTCTGCATTCCGACGGTGAAGCTGTTCGGGTTTCAGCAACGGCGCAATTTTAGC 60 |||||| |||||||| |||| |||||||| ||||||||||| ||| |||||||| ||||| Sbjct 68 ATGCTATTCTGCATTTCGACAGTGAAGCTTTTCGGGTTTCAACAAAGGCGCAATGTTAGC 127 Query 61 TCCTTAGCGAAGCGTTTCAGTCTCATCGGGAAATC-ACCTTTAGAGCCCCAAACTCAGGC 119 || ||||| ||||||||||||||| ||||||| | | | ||||||| |||||||||||| Sbjct 128 TCTTTAGCCAAGCGTTTCAGTCTCGCCGGGAAA-CTAACGTTAGAGCTCCAAACTCAGGC 186 Query 120 CTCTTTGGACAAGGACTTCTTACCCTGGTTAGAACGAATTGCTGGAGCAAAGATAACTAA 179 || |||||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 187 TTCGTTGGACAATAACTTCTTACCCTGGTTAGAGCGAATTGCTGGAGCAAAGATAACTAA 246 Query 180 CACGCTTTCGATTGGGAAATCCACATATGGCAGGTCACTGTTTGCCTCAAAATTTATCCA 239 || |||||||||||||||||||| ||||||||||||||||| ||||| ||| ||||| | Sbjct 247 TACTCTTTCGATTGGGAAATCCACCTATGGCAGGTCACTGTTCGCCTCCAAAGTTATCTA 306 Query 240 TGCCGGAGAATGCATGTTGAAAGTCCCTTTTAATGCGCAAATAACTCGAGATGAGTTGCC 299 ||| || || ||||||||||||||||||||||||||||||||||||| ||||||| | || Sbjct 307 TGCTGGTGACTGCATGTTGAAAGTCCCTTTTAATGCGCAAATAACTCCAGATGAGCT-CC 365 Query 300 CC-CGGATATTAGAGTTTCATTGACCGATGAAGTTGGGAATATTGGAAAGCTTGCTGCTG 358 || ||||||||||||||| ||||| | |||||||||||||||| |||| ||||||||||| Sbjct 366 CCTCGGATATTAGAGTTTTATTGAGCAATGAAGTTGGGAATATCGGAATGCTTGCTGCTG 425 Query 359 TTCTATTAAGAGAGAAGAAAACGGGTCAAAAGTCTCGATGGCTCCCTTATATCAGCCGAC 418 ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 426 TTCTAATAAGAGAGAAGAAAATGGGTCAAAAGTCTCGATGGGTCCCTTATATCAGCCGAC 485 Query 419 TTCCTCAACCTGCAGAGATGCACAGCACAATATTTTGGGGTGAAGATGAGTTCAGCATGA 478 |||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||| Sbjct 486 TTCCTCAACCTGCAGAGATGCATAGCTCGATATTTTGGGGTGAAGATGAGCTCAGCATGA 545 Query 479 TTCGTTGTAGTGCAGTTCACAAGGAAACAGTAAAACAAAAAGCTCAGATAGAAAAGGAAT 538 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct 546 TTCGTTGTAGTGCAGTTCACCAGGAAACAGTAAAACAAAAAGCTCAGATAGAAAAGGACT 605 Query 539 TCTCATTTGTAGCACAGGCATTTAAACAACATTATACCATGGTGATTGAACGCCCATATT 598 | ||||||||||| |||||||| |||||||||| | |||| || | |||||||||| ||| Sbjct 606 TTTCATTTGTAGCGCAGGCATTCAAACAACATTGTCCCATAGTAACTGAACGCCCAGATT 665 Query 599 TGGAAGACTTCATGTATGCATATGCTTTAGTGGGATCTCGTGCGTGGGAAACCTCAAAAG 658 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 666 TGGAAGATTTCATGTATGCATATGCTTTAGTGGGATCTCGTGCGTGGGAAAACTCAAAAC 725 Query 659 GCATATCTCTGATTCCGTTTGCAGACTTCATGAACCATGATGGGCTTTCTGCATCAATCG 718 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 726 GCATATCACTGATTCCGTTTGCAGACTTCATGAACCATGATGGGCTTTCTGCATCAATCG 785 Query 719 TTTTGAGCGATGAAGACAATCAACTATCAGAGGTCACAGCAGATCGTAACTACAGTCCCG 778 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| | Sbjct 786 TTTTGAGGGATGAAGACAATCAACTATCAGAGGTCACTGCAGATCGCAACTACAGTCCTG 845 Query 779 GTGATGAGGTGTTCATTAAGTATGGGGAATTCTCAAATGCTACACTCATGTTAGATTTTG 838 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 846 GTGATGAGGTATTCATCAAGTATGGGGAATTCTCAAATGCTACACTCATGTTAGATTTTG 905 Query 839 GATTTACCCTTCCTTACAACATTCATGACGAGGTTCAAATCCAAATGGATGTACCGAATG 898 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 906 GATTTACCTTTCCTTACAACATTCATGACGAGGTTCAAATCCAAATGGATGTACCGAATG 965 Query 899 ATGATCCTCTTCACGACATGAAGCTGGGACTTCTCCAGACACATCACACTCGAACTGTCA 958 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 966 ATGATCCTCTTCGCAACATGAAGCTGGGACTTCTCCAGACACATCACACTCGAACTGTCA 1025 Query 959 AAGATATCAATATATTTCACTCGTCTTGTGATACTTTCACGATCAAGGAAGTGAAATCTA 1018 ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 1026 AAGATATCAATATCTTTCACTCTTCTTGTGATACTTTCACAATCAAGGAAGTGAAATCTG 1085 Query 1019 CT-TCAGGAAAAGGGAGAGGAATTCCACAATCTCTCCGTGCATTTGCTCGTGTTCTCTGT 1077 || | ||| ||||| | ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1086 CTAT-AGGGAAAGGAAAAGGCATTCCACAATCTCTCCGTGCATTTGCTCGTGTTCTCTGT 1144 Query 1078 TGTACCATTCCTCAAGAGCTGAATGATTTGTCAAAAGAAGCTGCACAAAATGATGGCCGA 1137 |||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1145 TGTATCATTCCCCAAGAGCTAAATGATTTGTCAAAAGAAGCTGCACAAAATGATGGCCGA 1204 Query 1138 CTAGCTCGGCTTCCTTTTAAAGACAGGAGTAGAGAGTTGGAGGCACATAAGATCCTTTTG 1197 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||| Sbjct 1205 CTAGCTCGGCTTCCTTTTAAAGACGGGAACAGAGAGTTGGAGGCACATAAGATCCTCTTG 1264 Query 1198 TCTCATATCAACAGATTAATTGAGGATCATAGTGCTTGCATCAAGGAACTGGAAGAATCT 1257 ||||| ||||||||||| |||||||||||||||| ||||||||||||| ||||||||| Sbjct 1265 TCTCACATCAACAGATTGATTGAGGATCATAGTGTTTGCATCAAGGAAATGGAAGAAT-- 1322 Query 1258 AAATGCTATTTTGTATCACAAAGATTTGCTGTTAGAAGGAAGATGGCAAGAGATCTCCTA 1317 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1323 ----GCTATTTTGTATCACAAAGATTTGCTGTTAGAAGGCAGATGGCAAGAGATCTCCTA 1378 Query 1318 TCCGGTGAGCTTCGTGTTCTGAGATCTGCAGCTGAATGGCTCAATCATTATTGCACAACC 1377 | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1379 TACGGTGAGCTTCGTGTACTGAGATCTGCAGCTGAATGGCTCAATCATTATTGCACAACC 1438 Query 1378 TTGTTTTCAGTGACT-TCGAAACCGGTTTTACAGTCTCTACAATAG 1422 ||| |||||| ||| | | || || ||||||||||||||| |||| Sbjct 1439 TTGCTTTCAGAGACAAT-GTAATCGATTTTACAGTCTCTACGATAG 1483 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70079960820 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5