BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg324763 Length=522 Score E Sequences producing significant alignments: (Bits) Value AT3G63390.1 | Symbols: | unknown protein; Has 30201 Blast hits... 682 0.0 > AT3G63390.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:23411166-23411968 REVERSE LENGTH=803 Length=803 Score = 682 bits (369), Expect = 0.0 Identities = 478/527 (91%), Gaps = 21/527 (4%) Strand=Plus/Plus Query 1 ATGATGGACGAT---GATGATTACTCGGCGGCTGCGACTACCGTCGTCTTCGACCGTCCG 57 |||||||| ||| ||||||| ||||||||||||||||||||| || |||||||||||| Sbjct 26 ATGATGGAAGATGACGATGATTTCTCGGCGGCTGCGACTACCGTTGTGTTCGACCGTCCG 85 Query 58 ATTCCGCTGCTCCGGGGACCTGTACCCTCCGGTGGTTCATACGTTCTAGCTTTCCGATCC 117 |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 86 ATTCCGCTGCTCCGGGGACCTGTACCCTCCGGTGGTTCTTATGTTCTAGCTTTCCGATCA 145 Query 118 CTGGATTCATGGTCAGCCGCTTTCAAGCGTTGCGAAACCCTAATCAAGGACCAGTGCCAG 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 146 CTGGATTCATGGTCAGCCGCTTTCAAGCGTTGCGAAACCCTAATCAAGGACCAGTGCGAG 205 Query 178 GAAGGTGCTAGAATTGGGTGCGCCGTCTCCGCCTCCAACAACTGTAAGCCGCCGTGGTGG 237 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 206 GAAGGTGCTAAAATTGGGTGCGCCGTCTCCGCCTCCAACAACTGTAAGCCGCCGTGGTGG 265 Query 238 CGGGGCTCCGGTG---ACATGAGGGAGCGGGACAAGTGCGAAGAGCGGGAATTCCAGG-C 293 ||||| || |||| |||||||||| || || ||||||||||||||||||||| ||| | Sbjct 266 CGGGGATCTGGTGGTGACATGAGGGAACGAGAGAAGTGCGAAGAGCGGGAATTCGAGGGC 325 Query 294 ATGTGTGGCTGCCTCCATGGGCAAGTGCGCTGCTTTCGCCAAAGACAAGTGCTCTGGTGC 353 |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 326 -TGTGTGGCTGCCGCCAAGGGCAAGTGCGCTGCTTTCGCCAAAGACAAGTGCTCTGGTGC 384 Query 354 GTTTTTAGATGCGCGAATCTCCAAGGA---GC---TTGAGGGATTGGTGTGCCTAGCTTC 407 |||||||||||||||||| ||||||| | |||||||||||||||| |||||||| Sbjct 385 CTTTTTAGATGCGCGAATCGCCAAGGACAAGGAGGTTGAGGGATTGGTGTGGCTAGCTTC 444 Query 408 AATGCCGGAGCACAGCAGGTGGAGGGATCTCATGGGGATTGGT--T-CACTGCTTCTGCA 464 |||||||||| | |||||||||||||||||||||||| ||||| | |||||| |||||| Sbjct 445 AATGCCGGAGGAAAGCAGGTGGAGGGATCTCATGGGGCTTGGTGGTTCACTGCGTCTGCA 504 Query 465 CACCACCAACTGCTGC---ACTGCCAGGGATCTTCTTCGTAA-CCAT 507 ||||| |||||||||| || |||||||||||||||| ||| |||| Sbjct 505 CACCAACAACTGCTGCTGCACAGCCAGGGATCTTCTTCTTAAACCAT 551 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24966371059 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5