BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg324764 Length=1632 Score E Sequences producing significant alignments: (Bits) Value AT3G63400.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-... 1519 0.0 > AT3G63400.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr3:23412024-23415659 FORWARD LENGTH=2084 Length=2084 Score = 1519 bits (822), Expect = 0.0 Identities = 1035/1129 (92%), Gaps = 50/1129 (4%) Strand=Plus/Plus Query 1 ATGAGTaaaaaaaaGAATCCTAATGTTTTCTTGGATGTCTCTATTGGTGGGGATCCCGTT 60 |||| |||||| |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 148 ATGACTAAAAAGAAGAATCCTAATGTTTTCTTGGATGTATCAATTGGTGGGGATCCCGTT 207 Query 61 CAACGGATTGTCATTGAGCTTTTTGCTGATGTTGTCCCCAAGACAGCCGAAAACTTCCGT 120 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 208 CAACGGATTGTCATTGAGCTTTTTGCTGATGTTGTCCCCAAGACAGCGGAAAACTTCCGT 267 Query 121 GCCCTCTGCACAGGTGAGGCGGGAGTTGGAAAGGCCACTGGGAAGCCTCTACATTTCAAA 180 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 268 GCCCTCTGCACAGGTGAGGCGGGCGTTGGAAAGTCCACTGGGAAGCCTCTACATTTCAAA 327 Query 181 GGATCATCTTTCCATCGAGTTATCAAAGGATTCATGGCTCAGGGTGGTGACTTTTCCAAT 240 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 328 GGATCATCTTTCCATCGGGTTATCAAAGGATTCATGGCTCAGGGTGGTGATTTTTCCAAT 387 Query 241 GGAAATGGCACTGGTGGGGAGAGCATCTATGGTGGGAAGTTTTCAGATGAGAATTTTAGA 300 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 388 GGGAATGGCACTGGTGGGGAGAGCATCTATGGTGGGAAGTTTTCAGATGAGAACTTTAGA 447 Query 301 TTGGATCATGATGGAGCTGGAGTCCTTTCAATGGCAAATTGTGGCCCAAATACCAACGGG 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448 TTGGACCATGATGGAGCTGGAGTCCTTTCAATGGCAAATTGTGGCCCAAATACCAACGGG 507 Query 361 TCCCAATTTTTTATACTTTTTAAACGCCAACCACATCTTGATGGGAAGCATGTTGTATTT 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 TCCCAATTTTTTATACTTTTTAAACGCCAACCACATCTTGATGGGAAGCATGTTGTATTT 567 Query 421 GGCAAAGTCGTTGAGGGGATGGCAGTAATCAAGAAAATGGAACTTGTGGGGACGAGTGAT 480 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 568 GGCAAAGTCGTTGAAGGGATGGCAGTAATCAAGAAAATGGAACTTGTGGGGACGAGTGAT 627 Query 481 GGGAAACCTACTAGCCCAGTTAAAATAATCGACTGTGGCGAAACGTCTCAGATAAGAGCA 540 |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct 628 GGGAAACCTACTAGCCCAGTCAAAATAATAGACTGTGGTGAAACGTCTCAGATAAGAGCA 687 Query 541 CATGATGCTGCTGAAAGAGAAAAAGGGAAATCGAAAAAATCAAACAAGGGCCTTTCTTCT 600 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct 688 CATGATGCTGCTGAAAGAGAAAAAGGGAAATCGAAAAAATCAAACAAGAACTTTTCTCCT 747 Query 601 GGTGACATAT-T-----TGA--C--------C--GCaaaaaagaatcaaaggagaaaagg 642 |||||| ||| | ||| | | ||||||||||||| || ||||||||| Sbjct 748 GGTGACGTATCTGACCGTGAAGCTAAGGAGACACGCAAAAAAGAATCTAACGAGAAAAGG 807 Query 643 ataaagcgaaaaagaaTATACTCTTCGTCGGATTCATATAGCTCAAGTTCTGACTCAGAT 702 ||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||||||| Sbjct 808 ATAAAACGAAAAAGAAGATACTCTTCGTCAGATTCATATAGCTCAAGTTCCGACTCAGAT 867 Query 703 TCAGATTCGGAATCAGAAACATATTCATCCTCCTCCTATGAGTCTAGTTCTTCCAGTGAT 762 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 868 TCAGATTCGGAATCAGAAGCATATTCATCTTCCTCCTATGAGTCTAGTTCTTCCAGTGAT 927 Query 763 GGGAAGCATAGGAAGAGGAAGTCAACAA-AGAGACACAAAGGCCGACGCGGGGAAAGAAA 821 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 928 GGGAAGCATAGGAAGAGGAAGTCAACAACA-AGACACAAAGGCCGACGCGGGGAAAGAAA 986 Query 822 GATTAAAGGACGAAACGGGAAAAAGAAAGCTCGGCGAGATAGACAACCTCGGCGCAGAAG 881 || ||||||||||| |||||||||||||||||||| ||||||| |||| | | | Sbjct 987 GAGTAAAGGACGAAGCGGGAAAAAGAAAGCTCGGCCAGATAGAAAACC-------A-A-G 1037 Query 882 CACGGATAGTTTAAGTGACACGGAGAGTAGCAGCAGTTCTGATGATGAGAAAG----CCA 937 |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1038 CACGAATAGTTCAAGTGACACGGAGAGTAGCAGCAGTTCTGATGATGAGAAAGTGGGCCA 1097 Query 938 C----C-A-AA-G-CAG--A---T--A-A-CGCTGATCAACGCGCCGACTTGGATGACTC 980 | | | || | ||| | | | | ||||||||||| |||| ||||||||||||| Sbjct 1098 CAAAGCCATAAAGTCAGTGAAAGTTGATAACGCTGATCAACACGCCAACTTGGATGACTC 1157 Query 981 ATTGAAATCAAGGAGCAGGAGCCCAATTCGTAGGACTAACCAAAACAGCAGAAGCAAAAG 1040 | ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 1158 AGTGAAATCAAGGAGCAGGAGCCCAATTCGTAGGAGAAACCAAAACAGCAGGAGCAAAAG 1217 Query 1041 TCCTAGTAGGAGCCCTGTGAGAGATCTAGGAAATGGAAGCAGAAGTCCT 1089 ||||||||||||||||||||||| ||| |||||||||| |||||||||| Sbjct 1218 TCCTAGTAGGAGCCCTGTGAGAGTTCTTGGAAATGGAAACAGAAGTCCT 1266 Score = 985 bits (533), Expect = 0.0 Identities = 584/608 (96%), Gaps = 6/608 (1%) Strand=Plus/Plus Query 1031 GAAGCAAAAGTCCTAGTAGGAGCCCTGTGAGAGATCTAGGAAATGGAAGCAGAAGTCCTC 1090 ||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1253 GAAACAGAAGTCCTAGTAGGAGCCCTGTGAGAGATCTTGGAAATGGAAGCAGAAGTCCTC 1312 Query 1091 ATGAGAAGCCAACAGAGGGAACTGTGGGGAAATCTTCCAGAAGCCCATCTCCAAGTGGTG 1150 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1313 GTGAGAAGCCAACAGAGGAAACTGTGGGGAAATCTTTCAGAAGCCCATCTCCAAGTGGTG 1372 Query 1151 TGCCCAAGCGCATCCGAAAGGGGCGTGGGTTCACCGAACGCTATTCCTTTGCTCGGAAGT 1210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1373 TGCCCAAGCGCATCCGAAAGGGGCGTGGGTTCACCGAACGCTATTCCTTTGCTCGGAAGT 1432 Query 1211 ACCATACGCCTTCTCCTGAGCGTTCTCCTCCTAGACATTGGCCTGACAGGAGAAGCTTTC 1270 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1433 ACCATACTCCTTCTCCTGAGCGTTCTCCTCCTAGACATTGGCCTGACAGAAGAAACTTTC 1492 Query 1271 AGGATAGGAACAGGGATAGGTATCCGAGCAACAGAAGTTACTCTGAGCGCTCACCGAGGG 1330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1493 AGGATAGGAACAGGGATAGGTATCCGAGCAACAGAAGTTACTCTGAGCGCTCACCGAGGG 1552 Query 1331 GACGCTTTAGAAGCCCAACCAGAAGAAGGAGCCCTCCAAGGTACAACCGGAGGAGAAGGA 1390 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1553 GACGCTTTAGAAGCCCACCCAGAAGAAGGAGCCCTCCAAGGTACAACCGGAGGAGAAGGA 1612 Query 1391 GCACTTCTCGGAGTCCAGATGGGTACCGTAGACGCTTGAGAGACGGAAGCAGGAGCCAGA 1450 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1613 GCACTTCTCGGAGTCCAGATGGGTACCGTAGACGATTGAGAGACGGAAGCAGGAGCCAGA 1672 Query 1451 GTCCAAGGCATC--A----TAGCCAGAGCCCTAGAAAGAGGCAGCCAATTAGCCAAGACC 1504 |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 1673 GTCCGAGGCATCGTAGCCGTAGCCAGAGCCCTAGAAAGAGGCAGCCAATTAGCCAAGACC 1732 Query 1505 TTAAATCCCGTCTCGGGCCACAGAGATCCCCCATCAGAGGAGGACGCACCTCTCCTGCAG 1564 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1733 TGAAATCCCGTCTCGGGCCACAGAGATCCCCCATCAGAGGAGGACGCACCTCTCCTGCAG 1792 Query 1565 GATCGCTCAGCCCTTCTCACTCATCATCTCCACCAGGACAGAGAGGTCTGGTTAGCTATG 1624 ||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||| Sbjct 1793 AATCACTCAGCCCTTCTCACTCACCTTCTCCACCAGGAAAGAGAGGTCTGGTTAGCTATG 1852 Query 1625 CGGATTGA 1632 |||||||| Sbjct 1853 CGGATTGA 1860 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80622075270 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5