BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325069 Length=1701 Score E Sequences producing significant alignments: (Bits) Value AT5G04220.2 | Symbols: SYTC, ATSYTC, NTMC2TYPE1.3, NTMC2T1.3, S... 1903 0.0 > AT5G04220.2 | Symbols: SYTC, ATSYTC, NTMC2TYPE1.3, NTMC2T1.3, SYT3 | Calcium-dependent lipid-binding (CaLB domain) family protein | chr5:1155865-1158876 REVERSE LENGTH=1999 Length=1999 Score = 1903 bits (1030), Expect = 0.0 Identities = 1192/1265 (94%), Gaps = 31/1265 (2%) Strand=Plus/Plus Query 439 GTTAAGTTCTATGAGACCAATGAGAAGGAACTTCTGTTTGAACCATCAATAAAATGGGCA 498 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 644 GTTAAGTTCTATGAGACCAATGAGAAGGAGCTTCTGTTTGAACCATCAATCAAATGGGCA 703 Query 499 GGCAATCCCAACATTGTTTTGGTGCTTAAGGTTCTCTCTTTACGAATTAGAGTTCAGCTC 558 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 704 GGCAATCCCAACATTGTTTTGGTGCTAAAGGTTCTGTCTTTACGAATTAGAGTTCAGCTA 763 Query 559 GTAGATCTCCAGTTTTTTGCGATAGTGCGTGTAGCTCTGAAGCCTCTTCTGCCGACCTTC 618 |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| Sbjct 764 GTAGATCTCCAGTTTTTTGCAATAGTGCGTGTAGCTTTGAAGCCTCTTCTGCCGACATTC 823 Query 619 CCTTGTTTCGGAATGGTTGTAGTTTCATTAATGGAAAAGCCACATGTTGATTTTGGATTG 678 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 824 CCTTGTTTCGGAATGGTTGTAGTTTCGTTAATGGAAAAGCCACATGTTGATTTTGGATTG 883 Query 679 AAAGTGCTTGGTGGAGATGTCATGTCCATACCGGGTCTCTACAGATATGTTCAGGAAACT 738 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 884 AAAGTGCTTGGTGGAGATCTCATGTCCATACCGGGGCTCTACAGATATGTTCAGGAAACT 943 Query 739 ATTAAAAGGCAAGTTTCAAGTATGTACCATTGGCCACAAGTGCTTGAGATACCTATTCTT 798 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 944 ATTAAAAGGCAAGTTTCAAGCATGTACCATTGGCCACAAGTGCTTGAGATACCTATTCTT 1003 Query 799 GATGCTTCAACAGCTTCTGTAAAGAAGCCTGTTGGATTACTACATGTGAACATTATTCGA 858 ||| |||||||||| |||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1004 GATTCTTCAACAGCGTCTGTAAAGAAGCCTGTTGGATTACTACATGTGAGCATTCTTCGA 1063 Query 859 GCTAGTAATCTCCTCAAGAAGGATTTGCTGGGAACATCTGACCCTTATGTCAAGCTTAGC 918 ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 1064 GCTCGTAATCTCCTCAAGAAGGATTTGTTGGGAACATCCGACCCTTATGTCAAGCTTAGC 1123 Query 919 TTAACCGGAGAGAAGCTTCCAGCAAAGAAAACCACCATAAAGAAGAGGAACTTAAACCCG 978 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1124 TTAACTGGAGAAAAGCTTCCAGCAAAGAAAACCACCATAAAGAAGAGGAACTTAAACCCG 1183 Query 979 GAATGGAACGAACACTTTAAGCTCATCGTGAAGGACCCAAAATCACAAGTCCTTCAACTA 1038 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1184 GAATGGAACGAACACTTTAAGCTCATCGTCAAGGACCCAAACTCACAAGTCCTTCAACTA 1243 Query 1039 GAAGTTTTTGACTGGGACAAGGTCGGTGGGCACGACAGATTGGGAATGCAGATGATCCCC 1098 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1244 GAAGTCTTTGACTGGGACAAGGTCGGTGGGCACGACAGATTAGGAATGCAGATGATCCCT 1303 Query 1099 CTGCAAAAGATTAACCCGGGTGAGAAGAAGGCGTTTAATCTTGATCTGATCAAGAACTCA 1158 |||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| Sbjct 1304 TTGCAAAAGATTAACCCGGGTGAGAGGAAGGAGTTTAATCTTGATCTGATTAAGAACTCA 1363 Query 1159 AATGTTGTTATGGATTCTGGAGACAAGAAAAAGAGAGGAAGATTAGAG-TTGGATCTCAG 1217 |||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| Sbjct 1364 AATGTTGTTATGGATTCTGGAGACAAGAAAAAAAGAGGAAGATTAGAGGTTG-ATCTCAG 1422 Query 1218 ATATGTGCCATTCAGAGAAGAAAGCCTTAAGAGTAGAAATAAAAGTCAGGATGAGTACCA 1277 |||||||||||||||||||||||| ||||| ||||||| | | || | | | | Sbjct 1423 GTATGTGCCATTCAGAGAAGAAAGCATTAAGCGTAGAAA-A---G--AG-A-G----C-A 1469 Query 1278 GAGAAAAGAAAGCAGAGACGAGAAATCATCAGAGGACGACGATTTTCTCAGCCAAGCTGG 1337 ||||| || | | | | |||||||||||||| ||||||||||||||||| || Sbjct 1470 GAGAA--GA--G-A-A-A-------TCATCAGAGGACGATGATTTTCTCAGCCAAGCCGG 1515 Query 1338 TCTACTCTCGGTTGCAGTCCAATCTGCCAAAGATGTCGAGGGCAAGAAGAAACACTCGAA 1397 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1516 TCTACTCTCGGTTGCAGTCCAATCTGCAAAAGATGTCGAGGGCAAGAAGAAACACTCGAA 1575 Query 1398 CCCTTATGCTGTTGTTCTCTTCAGAGGAGAAAAGAAGAAAACAAAGATGCTGAAGAAAAC 1457 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1576 CCCTTATGCTGTTGTTCTCTTCAGAGGAGAAAAGAAGAAAACTAAGATGCTGAAGAAAAC 1635 Query 1458 ACGAGACCCTCGATGGAACGAGGAATTCCAGTTTACACTAGAGGAGCCTCCAGTGAAAGA 1517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1636 ACGAGACCCTCGATGGAACGAGGAATTCCAGTTTACACTAGAGGAGCCTCCAGTGAAAGA 1695 Query 1518 GAGTATACGCGTTGAGGTCATGAGTAAAGGAACCGGCTTTCACTTTCGATCAAAGGAGGA 1577 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1696 GAGTATACGCGTTGAGGTCATGAGTAAAGGAACCGGCTTTCACTTTCGATCCAAGGAGGA 1755 Query 1578 ACTAGGACATGTAGACATAAATCTTGG-CGATGTTGTTAACAATGGAAGGATCAACCAGA 1636 |||||||||||||||||||||||| || |||||| ||| ||||||||||||||||||||| Sbjct 1756 ACTAGGACATGTAGACATAAATCT-GGACGATGTAGTTGACAATGGAAGGATCAACCAGA 1814 Query 1637 AATACCATCTTATCAATTCCAGAAACGGCATAATTCACATTGAGATCCGTTGGACAACTA 1696 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1815 AATACCATCTTATCAATTCCAGAAACGGCATTATTCACATTGAGATCCGTTGGACAACTA 1874 Query 1697 GTTAA 1701 ||||| Sbjct 1875 GTTAA 1879 Score = 619 bits (335), Expect = 2e-176 Identities = 370/387 (96%), Gaps = 2/387 (1%) Strand=Plus/Plus Query 1 ATGGGTTTCTTCACCAGTGTGTTGGGGATCATCGGTTTTGTAATCGGAATCCCTATCGGA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 257 ATGGGTTTCTTCACCAGTGTGTTGGGGATCATCGGTTTTGTAATCGGAATCCCTATCGGA 316 Query 61 CTCATCCTTGGTTTCTTCGTCTTGATTTATTCTCAGCCTACCCACCAAGAGTATCCACCT 120 ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 317 CTCATCCTTGGTTTCTTCGTCTTGATTTATTCTCAGCCTTCACACCAAGAGTATCCACCT 376 Query 121 GCGAGGCCACTAGTTGAAACTAGCATCAGTGTTCTTCTTGATCTTTTACCAGAGATTCCA 180 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct 377 GCGAGGCCACTAGTTGAGACTAGTATCAGTGTTCTTCTTGATCTTTTACCAGACATTCCA 436 Query 181 TTGTGGATGAAGAATCCAGATTATGAAAGAGTGGACTGGTTTAACAAATTTATCTCATAC 240 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 437 TTATGGATGAAGAATCCAGATTATGAAAGAGTGGACTGGTTCAACAAATTTATCTCATAC 496 Query 241 ATGTGGCCTTACCTCGATAACGCTGTTTGCGGTATCATCCGGAGTTCTGCACAAC-TTAT 299 |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| || | Sbjct 497 ATGTGGCCTTACCTCGATAAGGCTGTTTGCGGGATCATCCGGAGTTCTGTACAACCTT-T 555 Query 300 ATTTGCAGATTTTGTTGGGACCTTCTGTATAGAATCCATTGAGTTCGAAAATTTGAGTCT 359 ||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 556 ATTTGCAGATTATATTGGCACCTTCTGTATAGAATCCATTGAGTTCGAAAATTTGAGTCT 615 Query 360 TGGACCGCTTCCACCCACAGTTCACGG 386 |||| |||||||||| ||||||||||| Sbjct 616 TGGAACGCTTCCACCTACAGTTCACGG 642 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 84085912875 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5