BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325175 Length=612 Score E Sequences producing significant alignments: (Bits) Value AT5G05440.1 | Symbols: PYL5, RCAR8 | Polyketide cyclase/dehydra... 992 0.0 > AT5G05440.1 | Symbols: PYL5, RCAR8 | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr5:1609250-1610446 FORWARD LENGTH=1197 Length=1197 Score = 992 bits (537), Expect = 0.0 Identities = 588/613 (96%), Gaps = 2/613 (0%) Strand=Plus/Plus Query 1 ATGAGGTCACCGGTGCAACTCCAACACGGCTCAGACGCCACAAACGGCTTCCACACGCTG 60 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 125 ATGAGGTCACCGGTGCAACTCCAACACGGCTCAGACGCCACTAACGGTTTCCACACGCTG 184 Query 61 CAGCCTCGCGATCAGAACGATGGTCCGATCAGGAGAGTGTGTCTCACGCGCGGTATGCAT 120 ||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 185 CAGCCTCACGATCAGACCGATGGTCCGATCAAGAGAGTGTGTCTCACGCGCGGTATGCAT 244 Query 121 GTCCCTGAGCACGTTGCGATGCACCACACACACGACGTTGGTCCAGACCAGTGCTGCTCT 180 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 245 GTCCCTGAACACGTTGCGATGCACCACACACACGACGTTGGTCCGGACCAGTGTTGCTCC 304 Query 181 TCGGTGGTGCAGATGATACACGCGCCGCCGGAGTCTGTGTGGGCTCTCGTGCGACGGTTT 240 ||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||| | |||| Sbjct 305 TCGGTGGTGCAGATGATCCACGCGCCGCCTGAGTCCGTGTGGGCTCTTGTGCGGC-GTTT 363 Query 241 -GATAACCCGAAGGTTTACAAGAACTTCATCAGACAGTGCCGTATCGTCCAAGGCGATGG 299 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 364 CGATAATCCGAAGGTTTACAAGAACTTCATCAGACAGTGCCGTATCGTCCAAGGCGATGG 423 Query 300 ACTACACGTCGGCGATCTACGGGAGGTCATGGTGGTCTCTGGACTCCCGGCGGTCTCGAG 359 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 424 ACTACACGTCGGCGATCTCCGGGAGGTCATGGTGGTCTCTGGACTCCCGGCGGTCTCGAG 483 Query 360 CACCGAGAGGCTCGAGATCTTGGACGAGGAGCGTCACGTGATAAGCTTTAGTGTCGTTGG 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 484 CACCGAGAGGCTCGAGATCTTGGACGAGGAGCGTCACGTGATAAGCTTTAGTGTCGTTGG 543 Query 420 TGGGGACCACAGGCTCAAGAACTACCGATCGGTGACGACACTACACACGGCGGACGATGA 479 |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| || Sbjct 544 TGGGGACCACAGGCTCAAGAACTACCGATCGGTGACGACACTACACGCGTCGGACGACGA 603 Query 480 AGGGACCGTCGTGGTGGAGTCTTACATCGTCGATGTGCCGCCGGGAAACACGGAGGAGGA 539 ||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 604 AGGTACCGTGGTGGTGGAGTCTTACATCGTTGATGTGCCGCCGGGAAACACGGAGGAGGA 663 Query 540 AACTCTAAGCTTCGTTGATACTATCGTCCGGTGCAACCTTCAGTCTCTGGCTAGAAGTAC 599 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 664 AACTCTAAGCTTCGTTGATACTATCGTCCGGTGCAACCTTCAGTCTCTGGCTCGAAGTAC 723 Query 600 CAACCGGCAATAA 612 ||||||||||||| Sbjct 724 CAACCGGCAATAA 736 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29487444289 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5