BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325325 Length=948 Score E Sequences producing significant alignments: (Bits) Value AT5G07100.1 | Symbols: WRKY26 | WRKY DNA-binding protein 26 | c... 992 0.0 AT4G39410.1 | Symbols: WRKY13, ATWRKY13 | WRKY DNA-binding prot... 75.0 1e-12 > AT5G07100.1 | Symbols: WRKY26 | WRKY DNA-binding protein 26 | chr5:2204248-2205811 FORWARD LENGTH=1159 Length=1159 Score = 992 bits (537), Expect = 0.0 Identities = 609/645 (94%), Gaps = 0/645 (0%) Strand=Plus/Plus Query 287 ACACATCTCCTCCATTGTCCCTACCATCTATGGTAACTCAGTCTTTACCCCAACTGGATG 346 ||||| ||||||| |||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct 316 ACACAACTCCTCCCTTGTTCCTACCATCTATGGTAACTCAGCCTTTACCTCAACTGGATT 375 Query 347 TATCCAAATCTGAAATCATGTCAAGGAACAAAACCTCTGATGACGGCTACAATTGGCGCA 406 ||| |||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 376 TATTCAAATCCGAAATCATGTCGAGTAACAAAACCTCTGATGACGGCTACAATTGGCGCA 435 Query 407 AATACGGGCAGAAGCAAGTCAAAGGAAGCGAAAACCCGAGGAGTTACTTCAAATGCACGT 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 436 AATACGGGCAGAAGCAAGTCAAAGGAAGCGAAAACCCGAGGAGTTACTTCAAATGCACGT 495 Query 467 ATCCAAATTGTCTCACAAAGAAGAAAGTGGAGACGTCACTTGTGAAGGGTCAGATCACAG 526 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | | Sbjct 496 ATCCAAATTGTCTCACAAAGAAGAAAGTAGAGACGTCTCTTGTGAAGGGTCAGATGATTG 555 Query 527 AGATTGTCTATAAAGGAAGCCACAATCATCCCAAGCCCCAATCCACTAAGAGATCATCTT 586 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 556 AGATTGTCTATAAAGGAAGCCACAATCATCCCAAGCCCCAATCCACGAAGCGATCATCTT 615 Query 587 CCACCACTGCAGCAGCGCAACAAAACAGCAGTCATGGAGACGGTAAAGACATTGGTGAAG 646 ||||| || |||||| || || ||||||||| ||||||||||||||||||||||||||| Sbjct 616 CCACCGCTATAGCAGCACATCAGAACAGCAGTAATGGAGACGGTAAAGACATTGGTGAAG 675 Query 647 ATGAAGCAGACGCCAAGAGATGGAAAAGAGAAGAGAATGTGAAGGAGCCAAGAGTAGTGG 706 ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 676 ATGAAACAGAGGCCAAGAGATGGAAAAGAGAAGAGAATGTGAAGGAGCCAAGAGTGGTGG 735 Query 707 TTCAGACAACAAGTGATATAGACATTCTTGACGATGGCTACAGATGGAGAAAGTATGGCC 766 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 736 TTCAGACAACAAGTGATATAGACATTCTTGACGATGGCTACAGATGGAGAAAGTATGGTC 795 Query 767 AGAAAGTTGTCAAGGGTAATCCCAATCCAAGGAGCTATTACAAGTGCACATTTACTGGAT 826 ||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 796 AGAAAGTCGTCAAGGGTAATCCAAATCCAAGGAGCTATTACAAGTGCACATTTACAGGAT 855 Query 827 GTTGTGTAAGGAAACACGTTGAGAGAGCATTTCAAGATCCCAAGTCAGTGATCACAACTT 886 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 856 GTTTTGTAAGGAAACACGTTGAAAGAGCATTTCAAGATCCCAAGTCAGTGATCACAACTT 915 Query 887 ACGAAGGAAAACATAAACACCAAATCCCGACTCCAAAAAGAGGTC 931 ||||||||||||| ||||||||||||||||| |||| |||||||| Sbjct 916 ACGAAGGAAAACACAAACACCAAATCCCGACCCCAAGAAGAGGTC 960 Score = 359 bits (194), Expect = 3e-98 Identities = 230/248 (93%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 1 ATGGGCTCTTTCGATCGCCAAAGAGCTGTCCCGAAATTCAAAACAGCAACTCCATCGCCG 60 ||||||||||| ||||||||||||||||| |||||||||||||||||||| || || ||| Sbjct 66 ATGGGCTCTTTTGATCGCCAAAGAGCTGTTCCGAAATTCAAAACAGCAACACCGTCACCG 125 Query 61 CTCCCTCTCTCTCCTTCGCCATACTTCACTATGCCTCCTGGCCTTACTCCCGCCGACTTT 120 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 126 CTCCCTCTTTCTCCTTCGCCTTACTTCACTATGCCTCCTGGCCTTACTCCCGCCGACTTT 185 Query 121 CTCGACTCACCTCTTCTCTTCACTTCCTCTAATATTTTGCCGTCTCCAACGACAGGCACA 180 |||||||| |||||||||||||||||||| || |||||||||||||| |||||||||||| Sbjct 186 CTCGACTCTCCTCTTCTCTTCACTTCCTCCAACATTTTGCCGTCTCCTACGACAGGCACA 245 Query 181 TTTCCGGCGCAATCTCTGAACTGGAAGAACAACGGTTTGCTCATTGACCAGAATGAAATC 240 ||||| |||||||||||||||| || || |||||||||||||||||| | ||||||||| Sbjct 246 TTTCCAGCGCAATCTCTGAACTATAACAATAACGGTTTGCTCATTGACAAAAATGAAATC 305 Query 241 AAATATGA 248 |||||||| Sbjct 306 AAATATGA 313 > AT4G39410.1 | Symbols: WRKY13, ATWRKY13 | WRKY DNA-binding protein 13 | chr4:18332878-18334789 REVERSE LENGTH=974 Length=974 Score = 75.0 bits (40), Expect = 1e-12 Identities = 74/89 (83%), Gaps = 7/89 (8%) Strand=Plus/Plus Query 732 TCTT-GACGATGGCTACAGATGGAGAAAGTATGGCCAGAAAGTTGTCAAGGGTAATCCCA 790 |||| || ||||| || |||||||||||||||||||||||||||||||| | |||| Sbjct 662 TCTTAGATGATGGATATAGATGGAGAAAGTATGGCCAGAAAGTTGTCAAAAACA--CCCA 719 Query 791 A--TCCAAGGAGCTATTACA-AGTGCACA 816 | ||| ||||||||||||| | |||||| Sbjct 720 ACATCCCAGGAGCTATTACAGA-TGCACA 747 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46366117681 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5