BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325438 Length=1434 Score E Sequences producing significant alignments: (Bits) Value AT5G08410.1 | Symbols: FTRA2 | ferredoxin/thioredoxin reductase... 889 0.0 AT5G08415.1 | Symbols: | Radical SAM superfamily protein | chr... 798 0.0 > AT5G08410.1 | Symbols: FTRA2 | ferredoxin/thioredoxin reductase subunit A (variable subunit) 2 | chr5:2709848-2710583 REVERSE LENGTH=736 Length=736 Score = 889 bits (481), Expect = 0.0 Identities = 532/557 (96%), Gaps = 2/557 (0%) Strand=Plus/Plus Query 879 GATGACTAACGGTTACGCTCTGTCACCGGCGATTATCGCCGCCGTTCGTCCTCCGGCATC 938 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 55 GATGACTAACAGTTACGCTCTGTCACCGGCGATTATCGCCGCCGTTCGTCCTCCGGCATC 114 Query 939 TCAAGACTGTCTAGCTT-CTGCTTCTCTTAATGGACGTAAATCGATCACCTCTTCATCTT 997 |||||||| ||||| || |||||||||||| |||||| |||||||||| ||||||||||| Sbjct 115 TCAAGACTATCTAG-TTGCTGCTTCTCTTAGTGGACGCAAATCGATCAACTCTTCATCTT 173 Query 998 CTTCCATCTTCGTACCTATCTCATTATCTACTTCCTACGGTCGAAGCAAATGCGGCTTCT 1057 | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 174 CGTCCATTTTCGTACCTATCTCATTATCTACTTCCTACGGTCGAAGCAAATGCGCCTTCT 233 Query 1058 CAATCTCGCGAAAGAATCCAAGATCGACAATTCGTTGTGATATTGCTGTGAAATCGGCAG 1117 |||||||||| |||||||||| |||||| |||||||| |||||||||||||||||||| | Sbjct 234 CAATCTCGCGGAAGAATCCAAAATCGACGATTCGTTGCGATATTGCTGTGAAATCGGCGG 293 Query 1118 CTTCTGTCGACGCGGACGCTGATCTTTCTTCATCTACGTCATTGGAGACTGAGGAAGACG 1177 ||||||| ||||||||||||||||| || ||||||||||| |||||||| |||||||||| Sbjct 294 CTTCTGTAGACGCGGACGCTGATCTATCGTCATCTACGTCGTTGGAGACGGAGGAAGACG 353 Query 1178 AGAAGGCGAAGGAGAAGATTGGGGCTAGGGTTAGGGTTACGGTGCCGTTGAAAGTTTACC 1237 |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 354 AGAAAGCGAAGGAGAAGATTGGAGCTAGGGTTAGGGTTACGGTTCCGTTGAAAGTTTACC 413 Query 1238 ATGTGGTTCGTGTACCGGAGGTTGAGTTGATGGGAATGGAAGGTTTTATCAAAGATTACG 1297 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 414 ATGTGGTTCGTGTACCGGAGGTTGAATTGATGGGAATGGAAGGTTTTATCAAAGATTACG 473 Query 1298 TCGTTCTTTGGAAAGGAAAGAAAATCTCAGCTAATCTGCCGTTTAAGGTACAATTCGTGA 1357 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 474 TCGTTCTTTGGAAAGGAAAGAAAATCTCAGCTAATCTGCCGTTTAAGGTACAGTTCGTGA 533 Query 1358 AAGAGATCGAAGGTCGTGGTCCTGTCAAATTCTTCACGCATCTTAAGGAAGACGAGTTCG 1417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 534 AAGAGATCGAAGGTCGTGGTCCTGTCAAATTCTTCACGCATCTTAAGGAAGACGAGTTCG 593 Query 1418 AGTTAATTGATCCGTGA 1434 ||||||||||||||||| Sbjct 594 AGTTAATTGATCCGTGA 610 > AT5G08415.1 | Symbols: | Radical SAM superfamily protein | chr5:2710817-2713132 REVERSE LENGTH=1382 Length=1382 Score = 798 bits (432), Expect = 0.0 Identities = 476/498 (96%), Gaps = 0/498 (0%) Strand=Plus/Plus Query 1 ATGGAGGAGTCGTCGTCTTTGAAGAAAAATCTGATGGAGTTAGAAGGGAAGAAGAGTGAG 60 |||||||| |||||||| |||||||| | | ||||||||||||||||||||||||||||| Sbjct 200 ATGGAGGATTCGTCGTCCTTGAAGAAGAGTTTGATGGAGTTAGAAGGGAAGAAGAGTGAG 259 Query 61 CCTTACCCAGGAGGAATGCCGAAGATGGGTCCATTCACTGGGAGAGATCCGAATGTGAAG 120 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 260 CCTTACCCAGGAGGAATGCCGAAGATGGGTCCATTCACAGGGAGAGATCCGAATGTGAAG 319 Query 121 AAACCTTCTTGGTTGAGACAAAAGGCACCTCAAGGCGAGAGGTTTCAGGAGGTGAAGGAG 180 |||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||| ||| Sbjct 320 AAACCTGCTTGGTTGAGACAGAAGGCACCACAAGGCGAAAGGTTTCAGGAGGTGAAAGAG 379 Query 181 TCGCTATCTCGTCTCAATCTCAATACTGTTTGTGAAGAAGCTCAGTGTCCTAATATCGGC 240 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 380 TCCCTTTCTCGTCTCAATCTCAATACTGTTTGTGAAGAAGCTCAGTGTCCTAATATCGGC 439 Query 241 GAGTGTTGGAATGGAGGTGGTGACGGTATAGCTACTGCAACCATCATGGTTCTTGGTGAT 300 ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct 440 GAGTGTTGGAATGGAGGTGGTGATGGTGTAGCAACTGCAACCATCATGGTTCTTGGTGAT 499 Query 301 ACTTGTACTCGTGGCTGTAGATTCTGTGCCGTTAAAACCAGTAGAAATCCTCCTCCTCCT 360 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 500 ACTTGTACTCGTGGCTGTAGATTCTGTGCTGTTAAAACAAGTAGAAATCCTCCTCCTCCT 559 Query 361 GACCCAATGGAACCAGAGAACACTGCCAAGGCCATAGCTAGTTGGGGTGTAGACTACATT 420 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 560 GACCCAATGGAACCAGAGAACACTGCCAAGGCCATAGCCAGTTGGGGTGTAGACTACATA 619 Query 421 GTTATCACCAGCGTAGACCGTGACGATATACCTGATGGGGGAAGTGGACATTTTGCGCAG 480 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 620 GTTATTACCAGCGTAGACCGTGACGATATACCTGATGGTGGAAGTGGACATTTTGCGCAG 679 Query 481 ACTGTCAAAGCTATGAAG 498 |||||||||||||||||| Sbjct 680 ACTGTCAAAGCTATGAAG 697 Score = 686 bits (371), Expect = 0.0 Identities = 379/383 (99%), Gaps = 0/383 (0%) Strand=Plus/Plus Query 497 AGGCTGTCGACACTCTTGTGCACTCGGGATTGGATGTTTTTGCTCACAATGTCGAGACTG 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 756 AGGCTGTCGACACTCTTGTGCACTCGGGATTGGATGTTTTTGCTCACAATGTCGAGACTG 815 Query 557 TGAAAAGGCTCCAGCGACTTGTGAGGGATCCTAGGGCTGGATATGAGCAGAGCATGTCGG 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 816 TGAAAAGGCTCCAGCGACTTGTGAGGGATCCTAGGGCTGGATATGAGCAGAGCATGTCAG 875 Query 617 TTTTGAAACATGCAAAGATCAGCAAACCTGGAATGATCACAAAGACATCCATAATGCTGG 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 876 TTTTGAAACATGCAAAGATCAGCAAACCTGGAATGATCACAAAGACATCCATAATGCTTG 935 Query 677 GTCTTGGAGAAACAGACGAAGAGTTGAAGGAAGCAATGGCTGATCTAAGAGCTATAGATG 736 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 936 GTCTTGGAGAAACAGACGAAGAGTTGAAGGAAGCAATGGCTGATCTAAGAGCTATAGATG 995 Query 737 TTGATATTCTAACACTTGGCCAGTATTTACAGCCAACTCCATTGCATCTGACTGTGAAAG 796 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 996 TTGATATTCTAACACTTGGCCAGTATCTACAGCCAACTCCATTGCATCTGACTGTGAAAG 1055 Query 797 AGTATGTCACACCTGAGAAGTTTGATTTCTGGAAAACATACGGAGAATCAATAGGATTTC 856 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1056 AGTATGTCACACCTGAGAAGTTTGATTTCTGGAAAACATACGGAGAATCAATAGGATTTC 1115 Query 857 GCTATGTTGCAAGTGGTCCACTG 879 | ||||||||||||||||||||| Sbjct 1116 GTTATGTTGCAAGTGGTCCACTG 1138 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70682367360 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5