BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325615 Length=1428 Score E Sequences producing significant alignments: (Bits) Value AT5G10770.1 | Symbols: | Eukaryotic aspartyl protease family p... 2180 0.0 AT5G10760.1 | Symbols: | Eukaryotic aspartyl protease family p... 483 3e-135 > AT5G10770.1 | Symbols: | Eukaryotic aspartyl protease family protein | chr5:3403110-3405448 REVERSE LENGTH=1763 Length=1763 Score = 2180 bits (1180), Expect = 0.0 Identities = 1346/1428 (94%), Gaps = 3/1428 (0%) Strand=Plus/Plus Query 1 ATGAGCATAAATAGGAATTTGTTGAATATCATAGTTGTCCTTTGTGTATGTCTCAATTTG 60 |||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||| Sbjct 118 ATGAGCATAAATAGGAATCTGTTGAATATCATAATAATCCTTTGTATATGTCTCAATTTG 177 Query 61 GGTTGTAACGAGGGAGCTCAAGAAAGAGAGATTGATGATTCTCATACAATCCAAGTCAGC 120 ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 178 GGTTGTAACGATGGAGCTCAAGAAAGAGAGA---CTGATTCTCATACTATCCAAGTCAGC 234 Query 121 TCTCTCTTCCCACCATCATCATCATCTTGTGTTCTTTCTCCCAGAGCGTCTACTACAAAG 180 |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 235 TCTCTCCTCCCTTCATCATCATCATCTTGTGTTCTTTCTCCCAGAGCGTCTACTACAAAG 294 Query 181 TCCTCACTGCACGTGACGCATAGGCACGGCACGTGCTCGCGTCTAAACAATGGCAAAGCC 240 || |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct 295 TCTTCACTGCACGTGACGCATAGACACGGCACGTGTTCGCGTCTAAACAATGGCAAGGCC 354 Query 241 ACGAGTCCAGACCATGTCGAGATCCTAAGACTCGACCAGGCTCGCGTAAACTCCATCCAC 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 355 ACGAGTCCAGACCATGTCGAGATCCTAAGACTCGACCAGGCTCGCGTAAACTCAATCCAC 414 Query 301 TCAAAACTGTCGAAGAAACTCACAACAAATCACGTCAGTCAAAGCCAGTCAACGGATCTA 360 |||||||| |||||||||||| ||||| ||||||||||| ||||| |||||||||||||| Sbjct 415 TCAAAACTATCGAAGAAACTCGCAACAGATCACGTCAGTGAAAGCAAGTCAACGGATCTA 474 Query 361 CCGGCTAAAGACGGAAGCACACTCGGTTCAGGTAACTACATCGTGACGGTCGGACTCGGG 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 475 CCGGCTAAAGACGGAAGCACACTCGGTTCAGGTAACTACATCGTGACGGTCGGCCTCGGG 534 Query 421 ACACCAAAGAACGATCTATCACTAATCTTCGACACCGGAAGCGATTTAACGTGGACTCAA 480 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 535 ACACCAAAGAACGATCTATCACTAATCTTCGACACTGGAAGCGATTTAACGTGGACTCAG 594 Query 481 TGTCAGCCATGTGTTCGAACTTGCTATGACCAAAAGGAACCAATCTTTAACCCTTCTAAG 540 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 595 TGTCAGCCATGTGTTCGAACTTGCTATGACCAGAAGGAACCAATCTTTAACCCTTCTAAG 654 Query 541 TCTACTTCTTACTACAACGTCTCCTGTTCATCATCAGCGTGTGGTTCCCTCTCTTCAGCT 600 |||||||||||||||||||| ||||| ||||| | ||||||||||| |||||||| ||| Sbjct 655 TCTACTTCTTACTACAACGTATCCTGCTCATCGGCTGCGTGTGGTTCTCTCTCTTCTGCT 714 Query 601 ACAGGAAACGCCGGAAGTTGTTCGGCTTCGAATTGCATCTACGGTATTCAATACGGCGAT 660 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 715 ACAGGAAACGCCGGAAGCTGTTCGGCTTCGAATTGCATCTACGGTATTCAATACGGCGAT 774 Query 661 CAATCATTCTCCATCGGGTTTCTCGCCAAGGATAAATTTACACTAACGAGCTCCGACGTA 720 ||||| |||||| |||| |||||||||||||| || ||||||||||||| |||||||||| Sbjct 775 CAATCGTTCTCCGTCGGATTTCTCGCCAAGGAGAAGTTTACACTAACGAACTCCGACGTA 834 Query 721 TTTGACGGTGTTTATTTCGGTTGTGGTGAGAACAACCAAGGACTTTTCACCGGTGTCGCC 780 |||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 835 TTTGACGGCGTTTATTTCGGTTGCGGCGAGAACAACCAAGGACTTTTCACCGGTGTCGCC 894 Query 781 GGACTTCTCGGTCTCGGCCGTGACAAGCTTTCATTTCCGTCGCAGACGGCTACGGCTTAC 840 |||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||| Sbjct 895 GGACTTCTCGGTCTTGGTCGTGACAAGCTTTCGTTTCCGTCGCAGACGGCAACGGCTTAC 954 Query 841 AATAAAATCTTCTCTTACTGTCTCCCTTCATCCGCAAGCTATACCGGACATCTCACCTTC 900 ||||| |||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||| Sbjct 955 AATAAGATCTTCTCTTACTGCCTCCCTTCCTCCGCTAGCTACACCGGACATCTCACATTC 1014 Query 901 GGATCCGCCGGAATCTCCAGATCCGTCAAATTCACGCCGATTTCAACCATCACTGATGGA 960 |||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct 1015 GGATCCGCCGGAATCTCCAGATCCGTTAAATTCACACCAATTTCAACCATCACTGATGGA 1074 Query 961 ACCTCGTTCTACGGCCTTAATATCGTTGCAATCACCGTCGGCGGTCAAAAACTGCCGATT 1020 || || |||||||||||||||||||| |||||||||||||||||||| ||| |||||||| Sbjct 1075 ACTTCCTTCTACGGCCTTAATATCGTCGCAATCACCGTCGGCGGTCAGAAATTGCCGATT 1134 Query 1021 CCTTCAACCGTGTTCTCAACTCCGGGAGCTTTAATCGATTCAGGAACCGTTATCACTCGT 1080 |||||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct 1135 CCTTCAACTGTATTCTCTACTCCGGGAGCTTTAATCGATTCCGGCACCGTTATCACTCGT 1194 Query 1081 CTCCCGCCGAAAGCTTACGCGGCGTTACGAAGCTCGTTCAAGGCGAAGATGTCAAAGTAT 1140 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1195 CTCCCGCCGAAAGCCTACGCGGCGTTAAGAAGCTCGTTCAAGGCGAAGATGTCAAAGTAT 1254 Query 1141 CCGACCACGTCAGGCGTCTCGATCTTGGACACGTGTTTCGATCTCAGCGGATTTAAGACG 1200 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1255 CCGACCACGTCGGGCGTCTCGATCTTGGACACGTGTTTCGATCTCAGCGGGTTTAAGACG 1314 Query 1201 GTGACGATCCCGAAAGTGGCGTTCTCTTTCAGCGGTGGCGCCGTCGTGGAACTTGGCTCA 1260 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1315 GTGACTATCCCGAAAGTGGCGTTCTCTTTCAGCGGTGGCGCCGTCGTGGAGCTTGGTTCG 1374 Query 1261 AAAGGAATATTTTACGCGTTTAAGATATCACAGGTTTGTTTGGCGTTTGCAGGGAATAGC 1320 ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||||| Sbjct 1375 AAAGGGATATTTTACGTGTTTAAGATATCTCAGGTTTGTCTGGCGTTTGCAGGGAATAGC 1434 Query 1321 GATGACAGTAACGCTGCCATCTTTGGAAACGTTCAGCAGCAAACGCTAGAAGTTGTGTAC 1380 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1435 GATGACAGTAACGCTGCCATCTTTGGAAACGTTCAGCAGCAAACGCTAGAAGTTGTGTAT 1494 Query 1381 GATGGTGCGGGTGGGCGGGTCGGGTTTGCTCCAAATGGGTGTAGTTAA 1428 ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1495 GATGGTGCGGGTGGGCGGGTCGGGTTTGCTCCAAACGGGTGTAGTTAA 1542 > AT5G10760.1 | Symbols: | Eukaryotic aspartyl protease family protein | chr5:3400342-3402207 REVERSE LENGTH=1766 Length=1766 Score = 483 bits (261), Expect = 3e-135 Identities = 1096/1478 (74%), Gaps = 142/1478 (10%) Strand=Plus/Plus Query 1 ATGAGCATAAAT-AGGAATTTGTTGAATATCATAGTTGTCCTTTGTGTATGTCTCAATTT 59 |||||||| ||| |||||||| |||| ||| ||| || | ||||| ||||||||||| || Sbjct 43 ATGAGCAT-AATGAGGAATTTCTTGAGTATGATAATTATGCTTTGCGTATGTCTCAA-TT 100 Query 60 GG-GTTGTAAC-GAGGGAGCTCAAG-AAA--G--AG-AG-ATTG-A--TGATTCTCATAC 107 || ||| | | || |||||| || ||| | || | | | | ||||||| | || Sbjct 101 GGTGTT-TTGCTGAAGGAGCT-GAGAAAAGCGATAGTGGAAAGGTACTTGATTCTTACAC 158 Query 108 AATCCAAGTCAGCTCTCTCTTCCCACCATCATCATCATCTTGTGTTCTTTCTCCCAGAGC 167 || |||||||||||||| || | || ||||||||||||||||| | |||| | | ||| Sbjct 159 CATTCAAGTCAGCTCTCTGTT--C-CCTTCATCATCATCTTGTGTCCCTTCTTCAAAAGC 215 Query 168 GTCTACTACAAAGTCCTCACTGCACGTGACGCATAGGCACGGCACGTGCTCGCGTCTAAA 227 |||| ||| ||||| || |||| |||| ||| | ||| || ||||||||| ||| | Sbjct 216 ATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCTCGCATCTTAG 275 Query 228 CAATGGCAAAGCCACGAGTCCAGACCATGTCGAGATCCTAAGACTCGACCAGGCTCGCGT 287 | | || | || | |||| | ||||||| ||| ||| | |||| ||| || || || || Sbjct 276 C-A--GCGATGCGA-GAGT-C-GACCATGACGAAATCATCAGACGCGATCAAGCACGTGT 329 Query 288 AAACTCCATCCACTCAAAACTGTCGAAGAAACTCA-CAACAAATCACGTCAGTCAAAGCC 346 | |||||| |||||||| |||| ||| || | | | ||||| | ||||| | ||||| Sbjct 330 GGAGTCCATCTACTCAAAATTGTCAAAG-AA-T-AGC-GCAAATGAAGTCAG-CGAAGCC 384 Query 347 -AGTCAACGGATCTACCGGCT-AAAGACGGAAGCACACTCGGTTCAGGTAACTACATCGT 404 |||||||||| ||||||||| |||| |||| ||||||||| ||||| ||||||||||| Sbjct 385 AAGTCAACGGAGCTACCGGCTAAAAG-TGGAATCACACTCGGATCAGGAAACTACATCGT 443 Query 405 GACGGTCGGACTCGGGACACCAAAGAACGATCTATCACTAATCTTCGACACCGGAAGCGA 464 || ||||| |||||||||| ||| |||||||||| || |||||||||||||||| || Sbjct 444 AACAATCGGAATCGGGACACCGAAGCACGATCTATCGCTGGTCTTCGACACCGGAAGTGA 503 Query 465 TTTAACGTGGACTCAATGTCAGCCATGTGTTCGAACTTGCTA-TGACCAAAAGGAACCAA 523 | || |||||||||||| |||||||| | ||| |||||| | | ||||||||||||| Sbjct 504 CCTGACATGGACTCAATGTGAGCCATGTCTAGGAAGTTGCTATTCA-CAAAAGGAACCAA 562 Query 524 TCTTTAACCCTTCTAAGTCTACTTCTTACTACAACGTCTCCTGTTCATCAT-CAGCGTGT 582 |||||||||||| |||| || ||||| | |||||||| || ||||| | || ||| Sbjct 563 AATTTAACCCTTCTTCGTCTTCTACTTACCAAAACGTCTCGTGCTCATC-TCCA--ATGT 619 Query 583 GGTTCCCTCTCTTCAGCTACAGGAAACGCCGGA-AGTTGTTCGGCTTCGAATTGCATCTA 641 | | | | | | ||| | || |||||||||||||| || ||| | || Sbjct 620 -G----------T--G--A-A-G--ACG-CTGAGAGTTGTTCGGCTTCCAACTGCGTATA 659 Query 642 CGGTATTC-AATACGGCGATCAA-TC-ATT-CTCCATCGGGTTTCTCGCCAAGGATAAAT 697 | ||| || ||||||||| || || || | ||| || ||||| || ||||| |||| Sbjct 660 CAGTA-TCGTTTACGGCGAT-AAGTCGTTTAC-CCA-AGGATTTCTTGCAAAGGAGAAAT 715 Query 698 TTACACTAACGAGCTCCGACGTATTT-GACGG-TGTTTA-TTTCGGTTGTGGTGAGAACA 754 |||| ||||||| ||| || || ||| || || |||||| ||| ||||| ||||| |||| Sbjct 716 TTACCCTAACGAACTCTGATGT-TTTGGA-GGATGTTTACTTT-GGTTGCGGTGAAAACA 772 Query 755 ACCAAGGACTTTTC-ACCGGTGTCGCCGGACTTCTCGGTCTCGGCCGTGACAAGCTTTCA 813 |||||||||||||| | |||||| || || |||||||| || |||| || ||| || ||| Sbjct 773 ACCAAGGACTTTTCGA-CGGTGTTGCTGGGCTTCTCGGCCTTGGCCCTGGCAAACTCTCA 831 Query 814 TTTCCGTCGCAGACGGCTACGGCTTACAATAAAATCTTCTCTTACTGTCTCCCTTCATCC 873 | ||| |||| || | ||| | ||||| || |||||||| |||||||| ||||| | | Sbjct 832 CTACCGGCGCAAACAACAACGACCTACAACAATATCTTCTCCTACTGTCTACCTTCTTTC 891 Query 874 GCAAGCT---A-TACCGGACATCTCACCTTCGGATCCGCCGGAATCTCCAG-ATCCGTCA 928 |||| | | ||| || ||||| ||||| |||||||| ||||||| | | |||||| | Sbjct 892 ACAAG-TAACAGTACTGGCCATCTTACCTTTGGATCCGCTGGAATCT-CTGAATCCGTTA 949 Query 929 AATTCACGCCGATTTCAACCATCACTGATG-GAACCTCGTTCTACGGCCTTAATATCGTT 987 ||||||| |||||||| || || | | | | | || | || ||| | ||||| | Sbjct 950 AATTCACACCGATTTCTTCCTTC-C-CAAGCGCA-TTCAAT-TATGGCATCGATATCATA 1005 Query 988 GCAATCACCGTCGGCGGTCAA-AAACT-GCCGATTCCTTCAACCGT-GTTCTCAACTCCG 1044 | |||| || ||| | ||| || | | ||||| || ||| | | ||||| | ||| Sbjct 1006 GGTATCAGTGTAGGC-GACAAGGAATTAG-CGATTACTCCAAAC-TCATTCTCGA--CCG 1060 Query 1045 --GGAGCTTTAATCGATTCAGGAACCGT-TATCACTCGTCTCCC-GCCGAAAGCT-TACG 1099 || ||| ||||||| ||||| || || | | ||||| ||||| || |||| | |||| Sbjct 1061 AAGGTGCTATAATCGACTCAGGCACAGTGT-TTACTCGCCTCCCTACC-AAAG-TCTACG 1117 Query 1100 CGGCGTTACGAAGCTCG--TTCAAGGCGAAGATGTCAAAG-TATC-CGACCACGTCAGGC 1155 ||| | || || | | || |||| |||||||| || || | || ||||| || Sbjct 1118 CGGAACTCCGCAG-T-GTTTTTAAGGAAAAGATGTC-GAGTTA-CAAGAGTACGTC-GG- 1171 Query 1156 G-T-CTCGATCTTGGACACGTGTTTCGATCTCAGC-GGATTTAAGACGGTGACGAT-CCC 1211 | | | | | || ||||| |||| |||| ||| | || || | |||||||| || ||| Sbjct 1172 GATACGGGCTTTTTGACACATGTTACGATTTCA-CTGGCTTGGATACGGTGAC-ATACCC 1229 Query 1212 GAAAG-TGGCGTTCTCTTTCAG-CGGTGGCGCCGTCGTGGAACTTGGCT-CAAAAGGAAT 1268 | | | | || ||||| ||| | |||| || | ||||| |||||| | | | ||| || Sbjct 1230 G-ACGATTGCATTCTCCTTC-GCCGGTAGCACTGTCGTAGAACTT-GATGGATCAGGGAT 1286 Query 1269 ATT--TTACGCGTTTAAGATATCACAGGTTTGTTTGGCGTTTGCAGGGAATAGCGATGAC 1326 || || | || | |||||||||||||||||||||||||||||||||||| |||||| Sbjct 1287 -TTCGTTGC-CGATCAAGATATCACAGGTTTGTTTGGCGTTTGCAGGGAAT---GATGAC 1341 Query 1327 AGTAACGCTGCCATCTTTGGAAACGTTCAGCAG-CAAACGCTAGAAGTTGTGTACGATGG 1385 | | | |||||||||||||||||||||||| | | ||||||| ||||||||||| | Sbjct 1342 -CT-TC-CCGCCATCTTTGGAAACGTTCAGCAGACGA-CGCTAGATGTTGTGTACGACG- 1396 Query 1386 TG-CGGGTGGGCGGGTCGGGTTTGCTCCAAATGGGTGT 1422 || | ||||| || ||||| |||||||| ||||| ||| Sbjct 1397 TGGCTGGTGGACGAGTCGGTTTTGCTCCCAATGGTTGT 1434 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70381164090 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5