BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325637 Length=1311 Score E Sequences producing significant alignments: (Bits) Value AT5G11020.1 | Symbols: | Protein kinase superfamily protein | ... 2069 0.0 > AT5G11020.1 | Symbols: | Protein kinase superfamily protein | chr5:3486242-3489234 REVERSE LENGTH=1750 Length=1750 Score = 2069 bits (1120), Expect = 0.0 Identities = 1256/1318 (95%), Gaps = 23/1318 (2%) Strand=Plus/Plus Query 1 ATGAGGCAATTTGTTATAACAGCTCTTGTTTTACTACAAGCTTATGTTCTTCATCAATCC 60 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 252 ATGAAGCAAATTGTTATAACAGCTCTTGTTTTACTACAAGCTTATGTTCTTCATCAATCC 311 Query 61 ACATTTGTTGTGTCCCTCACTTCACATGAATCTCTTTCTCCTCAGCCTTCTGCTTTCACT 120 |||| |||| ||||||| ||| |||| ||||||| ||||||||| ||||||||||||||| Sbjct 312 ACATGTGTTATGTCCCTTACTACACAAGAATCTCCTTCTCCTCAACCTTCTGCTTTCACT 371 Query 121 CCCGACTTATCTCCTGGTT-TGCAACAAG-GAGAGAAGGAATTGCATAAACAAGATAGTA 178 |||| ||||||||||| || | |||| || ||||||||||||||||||||||||| |||| Sbjct 372 CCCGCCTTATCTCCTGATTAT-CAAC-AGAGAGAGAAGGAATTGCATAAACAAGAGAGTA 429 Query 179 ACAACATGAGACTGGTTATTTCACTAGCAGCTGCATTTTCCTTAGTTGGGATAATCTTAG 238 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct 430 ACAACATGAGACTGGTTATTTCACTAGCAGCTACATTTTCCTTAGTTGGTATAATCTTAC 489 Query 239 TTTGCTCTCTGCTTTATTGGTTTTGCCATAGGAGAAGAAACCCT-AAGAGCTCCGGTTGT 297 |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| Sbjct 490 TTTGCTCTCTGCTTTATTGGTTTTGCCATAGGAGAAGAAA-CCTCAAGAGCTCAGGTTGT 548 Query 298 GGGTGTAGTGAAATCACATTCTCACGGTTCTTGAACCGCTTTAGTCGCTCAAAAACATTA 357 |||||||||| ||| || || |||||||| || ||||||||||||||||||||| Sbjct 549 GGGTGTAGTGGAAT--CA----CA---TTCTTGAATCGGTTTAGTCGCTCAAAAACATTA 599 Query 358 GACAAGAGAACTACAAAGCAGGGAATC-GTGTCGTTGATCGATTACAATATACTAGAAAA 416 ||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||| | Sbjct 600 GACAAGAGAACTACAAAGCAGGGAA-CAGTGTCATTGATCGATTACAATATACTAGAAGA 658 Query 417 AGGAACTAGTGGTTTCAAGGAGAGTAACATTTTGGGTCAAGGTGGATTTGGATGTGTATA 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 659 AGGAACTAGTGGTTTCAAGGAGAGTAACATTTTGGGTCAAGGTGGATTTGGATGTGTATA 718 Query 477 TT-TGGCCACATTAGAGAACAACATTTCAGCTGCGGTCAAGAAGCTAGACTGTGCCAATG 535 || | |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 719 TTCT-GCCACATTAGAGAACAACATTTCAGCTGCGGTTAAGAAGCTAGACTGTGCCAATG 777 Query 536 AAGATGCGGCTAAGGAATTTAAGAGTGAGGTTGAGATATTGAGTAAGCTCCAGCACCCGA 595 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 AAGATGCAGCAAAGGAATTTAAGAGTGAGGTTGAGATATTGAGTAAGCTCCAGCACCCGA 837 Query 596 ATATAATATCCCTTTTGGGTTATAGCACAAATGATACTGC-ACGATTCATCGTCTATGAG 654 |||||||||||||||||||||||||||| ||||||||||| | ||||||| ||||||||| Sbjct 838 ATATAATATCCCTTTTGGGTTATAGCACGAATGATACTGCGA-GATTCATTGTCTATGAG 896 Query 655 CTGATGCCAAACGTTTCTCTGGAATCTCATTTGCACGGATCCTCTCGA-GGTTCGGCGAT 713 |||||||||||||||||||||||||||||||| |||||||| |||| | ||||||||||| Sbjct 897 CTGATGCCAAACGTTTCTCTGGAATCTCATTTACACGGATCTTCTC-AGGGTTCGGCGAT 955 Query 714 CACATGGCCTATGAGGATGAAGATTGCTCTTGATGTAACAAGGGGATTAGAATATTTGCA 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 956 CACATGGCCTATGAGGATGAAGATTGCTCTTGATGTAACAAGGGGATTAGAATATTTGCA 1015 Query 774 TGAACATTGTCATCCAGCAATCATCCACAGGGACTTGAAATCATCCAACATCTTGTTGGA 833 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || Sbjct 1016 TGAACATTGTCATCCAGCAATCATTCACAGGGACTTGAAATCATCCAACATCTTATTAGA 1075 Query 834 TAGTAATTTCAATGCTAAGATTTCAGATTTTGGTCTTGCTGTTGTTGATGGGCCGAAGAA 893 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 1076 TAGCAATTTCAATGCTAAGATTTCAGATTTTGGTCTAGCTGTTGTTGATGGGCCAAAGAA 1135 Query 894 CAAGAACCATAAACTTTCCGGGACAGTTGGCTACGTTGCACCAGAGTATCTTCTCAACGG 953 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 CAAGAACCATAAACTTTCCGGGACAGTTGGCTACGTTGCACCAGAGTATCTTCTCAACGG 1195 Query 954 CCAATTGACAGAAAAGAGCGACGTGTATGCTTTTGGAGTAGTGTTATTAGAGCTTTTACT 1013 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1196 CCAATTGACAGAAAAGAGCGACGTGTATGCTTTTGGAGTAGTGTTATTAGAGCTTTTACT 1255 Query 1014 CGGGAAAAAACCCGTGGAGAAACTAGCTCCCGGTGAATGCCAATCCATCATCACTTGGGC 1073 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1256 CGGGAAAAAACCTGTGGAGAAACTAGCTCCCGGTGAATGCCAATCCATCATCACTTGGGC 1315 Query 1074 AATGCCTTATCTCACTGATAGAACCAAGTTACCAAGCGTCATAGATCCTGCGATTAAAGA 1133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 AATGCCTTATCTCACTGATAGAACCAAGTTACCAAGCGTCATAGATCCTGCGATTAAAGA 1375 Query 1134 CACAATGGACTTGAAACACCTTTACCAGGTAGCGGCAGTGGCGGTTTTGTGCGTGCAGCC 1193 || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1376 TACGATGGACTTGAAACACCTTTACCAGGTAGCGGCAGTGGCGATTTTGTGCGTGCAGCC 1435 Query 1194 AGAACCGAGTTATAGACCGTTGATTACAGACGTCTTGCATTCTCTTATACCTTTGGTTCC 1253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 AGAACCGAGTTATAGACCGTTGATTACAGACGTCTTGCATTCTCTTATACCTTTGGTTCC 1495 Query 1254 AATGGAACTTGGTGGAACCTTAAAAACAATCAAATGTGCTTCAATGGATCACTGTTAA 1311 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1496 AATGGAACTTGGTGGAACCTTAAAAACCATCAAATGTGCTTCAATGGATCACTGTTAA 1553 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64507700325 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5