BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg327088
Length=3156
Score E
Sequences producing significant alignments: (Bits) Value
AT4G08350.1 | Symbols: GTA02, GTA2 | global transcription facto... 2427 0.0
AT2G34210.1 | Symbols: | Transcription elongation factor Spt5 ... 1062 0.0
AT4G08360.1 | Symbols: | KOW domain-containing protein | chr4:... 287 5e-76
> AT4G08350.1 | Symbols: GTA02, GTA2 | global transcription factor
group A2 | chr4:5286234-5292239 FORWARD LENGTH=3410
Length=3410
Score = 2427 bits (1314), Expect = 0.0
Identities = 1451/1516 (96%), Gaps = 13/1516 (1%)
Strand=Plus/Plus
Query 1 ATGCCGCGAAGCAGAGACGAAGACGATGAAATagacggagactacgaaggattggaatta 60
|||||||||||||||||||||||||||||| ||||||| |||||||||| ||| || |||
Sbjct 118 ATGCCGCGAAGCAGAGACGAAGACGATGAATTAGACGGTGACTACGAAGCATTAGATTTA 177
Query 61 gaggaagaagaggaagaagac---gaagaagaagaagagagaggaagaggcggcggcggt 117
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 178 GAGGAAGAAGAGGAAGAAGACGAAGAAGAAGAAGAAGAGAGAGGAAGAGGTGGCGGCGGT 237
Query 118 tctaggcggaagagaggaagaTCGAATTTTATTGATGATTATGCGGATGAAGATTCTCAG 177
||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct 238 TCTAGACGGAAGAGAGGAAGATCGAATTTTATCGATGATTATGCTGAGGAAGATTCTCAG 297
Query 178 GAAGAAGACGATGATGATGAAGATTAT-G--GTAGCCGTGGAGGTAAAGGAGCTGCTAGT 234
|||||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||
Sbjct 298 GAAGAAGATGATGACGATGAAGATTATGGTAGTAGCCGTGGAGGTAAAGGAGCTGCTAGT 357
Query 235 AAGAGAAAGAAGCCTTCTGCTTCCATTTTCTTAGACCGAGAAGCTCATCAGGTTGATGAT 294
|||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 358 AAGAGAAAGAAGCCATCTGCTTCTATTTTCTTAGACCGAGAAGCTCATCAAGTTGATGAT 417
Query 295 GAGGAGGAAGAGGACGAAGAAGAAGGAGAAGATGACTTTATTGTGGATGCTGGAACGGAC 354
|| || |||||||| ||||| |||| ||||||||| |||||||||||| ||||||||||
Sbjct 418 GAAGACGAAGAGGAAGAAGATGAAGCAGAAGATGATTTTATTGTGGATAATGGAACGGAC 477
Query 355 CTTCCTGATGAGCGTGGTGATAGACGGTACGAACGGAGGTTTCTTTCTCGTGACGAAAAT 414
||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 478 CTTCCGGATGAGCGTGGTGATAGACGGTACGAACGGAGGTTTCTTCCTCGAGACGAAAAT 537
Query 415 GATGAGGATGTGGAAGATCTTGAGAGAAGAATTCAAGAGCGG-T-T-CTCTAGGCATCAT 471
|||||||||||||||||||| ||||||||||||||||||||| | | |||||||||||||
Sbjct 538 GATGAGGATGTGGAAGATCTCGAGAGAAGAATTCAAGAGCGGTTCTCCTCTAGGCATCAT 597
Query 472 GAAGAATATGATGAAGAAGCCACTGATGTTGAGCAACAAGCGCTTTTGCCATCAGTTCGC 531
|||||||||||||||||||| || || ||||||||||||||||||||||||||||| ||
Sbjct 598 GAAGAATATGATGAAGAAGCTACAGAAGTTGAGCAACAAGCGCTTTTGCCATCAGTCCGT 657
Query 532 GACCCGAAATTGTGGATGGTGAAATGTGCGATTGGTCGCGAAAGGGAGGTTGCTGTTTGT 591
|| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 658 GATCCGAAATTGTGGATGGTGAAATGTGCGATTGGCCGTGAAAGGGAGGTTGCTGTTTGT 717
Query 592 CTTATGCAAAAATTTATAGATCGAGGAGCTGATTTGCAGATTAGATCTGTTGTTGCCCTT 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 CTTATGCAAAAATTTATAGATCGAGGAGCTGATTTGCAGATTAGATCTGTTGTTGCCCTT 777
Query 652 GACCATCTTAAGAATTATATATATGTTGAAGCAGACAAGGAAGCTCATGTGAAAGAGGCA 711
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 GACCATCTTAAGAATTTTATATATGTTGAAGCAGACAAGGAAGCTCATGTGAAAGAGGCA 837
Query 712 ATCAAGGGCATGAGGAATATATATGCTAATCAGAAGATCTTACTTGTCCCGATAAGAGAA 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 ATCAAGGGCATGAGGAATATATATGCTAATCAGAAGATCTTACTTGTCCCGATAAGAGAA 897
Query 772 ATGACAGATGTGCTTTCTGTTGAAAGCAAAGCAATTGATCTATCTCGGGATACCTGGGTT 831
||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 898 ATGACAGATGTTCTTTCTGTTGAGAGCAAAGCCATTGATCTATCACGGGATACCTGGGTT 957
Query 832 AGAATGAAAATCGGGACGTATAAAGGTGATCTTGCAAAGGTAGTTGACGTTGATAATGTG 891
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 958 AGAATGAAAATCGGGACGTATAAAGGTGATCTTGCAAAGGTAGTTGATGTTGATAATGTG 1017
Query 892 CGTCAGAGGGTCACAGTCAAGTTAATCCCAAGAATTGATCTGCAGGCACTAGCCAGTAAG 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 CGTCAGAGGGTCACAGTCAAGTTAATCCCAAGAATTGATCTGCAGGCACTAGCCAGTAAG 1077
Query 952 CTGGACGGAAGAGAAGTTTCAAAGAAAAAAGCCTTTGTTCCACCTCCACGTTTCATGAAC 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 CTGGACGGAAGAGAAGTTTCAAAGAAAAAAGCCTTTGTTCCACCTCCACGTTTCATGAAC 1137
Query 1012 ATTGATGAAGCAAGGGAATTGCACATACGTGTTGAGCGTCGGCGTGATCCCATGACGGGT 1071
||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |||
Sbjct 1138 ATTGATGAAGCGAGGGAACTGCACATACGTGTTGAGCGTCGGCGTGATCACATGACTGGT 1197
Query 1072 GATTACTTTGAAAATATTGGTGGCATGCTTTTCAAAGATGGTTTT-ATGTACAAAACA-G 1129
||||||||||||||||||||||||||||||||||||||||| ||| || |||||| || |
Sbjct 1198 GATTACTTTGAAAATATTGGTGGCATGCTTTTCAAAGATGGGTTTCAT-TACAAA-CAAG 1255
Query 1130 TATCATTGAAGTCCATCACTGTTCAGAATGTTACACCAACTTTTGACGAACTTGAAAAAT 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 TATCATTGAAGTCCATCACTGTTCAGAATGTTACACCAACTTTTGACGAACTTGAAAAAT 1315
Query 1190 TCAATAAACCAAGTGAAAATGGAGAGGGCGATTTTGGTGGTCTGTCAACTTTATTTGCAA 1249
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1316 TCAATAAACCAAGTGAAAATGGAGAGGGCGACTTTGGTGGTCTGTCAACATTATTTGCAA 1375
Query 1250 ACAGAAAGAAAGGGCATTTCATGAAGGGTGATGCAGTTATTGTTATAAAGGGGGATCTGA 1309
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1376 ACAGAAAGAAAGGTCATTTCATGAAGGGTGATGCAGTTATTGTTATCAAGGGGGATCTGA 1435
Query 1310 AAAACTTGAAGGGTTGGGTTGAGAAAGTAGATGAAGAAAATGTCCTTATCAGATCAGAAA 1369
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 AAAACTTGAAGGGTTGGGTTGAGAAAGTAGATGAAGAAAATGTCCTTATCAGATCAGAAG 1495
Query 1370 TGAAAGGTCTCCCTGATCCTCTTGCTGTAAATGAGAGAGAGCTTTGCAAGTACTTTGAAC 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 TGAAAGGTCTCCCTGATCCTCTTGCTGTAAATGAGAGAGAGCTTTGCAAGTACTTTGAAC 1555
Query 1430 CTGGAAATCATGTGAAGGTTGTTTCTGGGACCCATGAAGGAGCAACAGGCATGGTTGTCA 1489
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1556 CTGGAAATCATGTGAAGGTTGTCTCTGGGACCCATGAAGGAGCAACAGGCATGGTTGTCA 1615
Query 1490 AAGTTGATCAACACGT 1505
||||||||||||||||
Sbjct 1616 AAGTTGATCAACACGT 1631
Score = 1493 bits (808), Expect = 0.0
Identities = 853/875 (97%), Gaps = 2/875 (0%)
Strand=Plus/Plus
Query 2284 CAGTTGATCGGGATGCAATATCAGATAATGTTGCGACAACACCCTTT--AGATACATCTC 2341
|||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 2369 CAGTTGATCGGGGTGCAATATCAGATAATGTTGCGACAACACCGTTTAGAGATACATCTC 2428
Query 2342 GGTATAGTATGGGAAGCGAAACACCTATGCATCCTTCTCGGACTCCACTTCATCCTTATA 2401
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2429 GGTATAGTATGGGAAGCGAAACACCTATGCATCCTTCACGGACTCCACTTCATCCTTATA 2488
Query 2402 TGACTCCAATGCGGGACTCTGGAGCTACACCAATCCATGATGGAATGAGGACACCCATGC 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2489 TGACTCCAATGCGGGACTCTGGAGCTACACCAATCCATGATGGAATGAGGACACCCATGC 2548
Query 2462 GAGATAGAGCGTGGAATCCTTACACGCCTATGAGTCCACCAAGGGATAACTGGGAAGATG 2521
| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2549 GTGATAGAGCTTGGAATCCTTACACGCCTATGAGTCCACCTAGGGATAACTGGGAAGATG 2608
Query 2522 GAAATCCGGGATCTTGGGGAACGAGTCCTCAATATCAGCCGGGAAGTCCTCCTTCACGGG 2581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2609 GAAATCCGGGATCTTGGGGAACGAGTCCTCAATATCAGCCGGGAAGTCCTCCTTCACGGG 2668
Query 2582 CATATGAAGCACCAACTCCTGGCTCAGGATGGGCTAGTACTCCTGGTGGTAGTTACTCGG 2641
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2669 CATATGAAGCACCAACGCCTGGCTCAGGATGGGCTAGTACTCCTGGTGGTAGTTACTCGG 2728
Query 2642 ATGCGGGGACGCCTAGAGACCATGGTTCAGCTTATGCTAATGCCCCAAGTCCTTACCTGC 2701
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2729 ATGCGGGGACACCTAGAGACCATGGTTCAGCTTATGCTAATGCCCCAAGTCCTTACCTGC 2788
Query 2702 CATCGACACCTGGGCAACCCATGACACCAAGCTCGGCTTCATACTTACCTGGAACTCCTG 2761
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2789 CATCAACACCTGGGCAACCCATGACACCAAGCTCGGCTTCATACTTACCTGGTACTCCCG 2848
Query 2762 GAGGACAACCAATGACTCCTGGAACTGGCCTCGATGTCATGTCTCCTGTTATAGGTGGGG 2821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2849 GAGGACAACCAATGACTCCTGGAACTGGCCTCGATGTCATGTCTCCTGTTATAGGTGGGG 2908
Query 2822 ATGCTGAAGCATGGTTCATGCCCGATATTTTGGTTGACGTACACAAGGCTGGAGAAGACA 2881
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 2909 ATGCTGAAGCATGGTTCATGCCCGATATTTTGGTTGACATACACAAGGCTGGAGAGGACA 2968
Query 2882 GCGATGTGGGCGTCATCCGAGATGTTTCGGATGGAACGTGTAAAGTGTCTCTCGGGTCCA 2941
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2969 CCGATGTGGGCGTCATCCGAGATGTTTCGGATGGAACGTGTAAAGTGTCTCTCGGGTCCA 3028
Query 2942 GCGGTGAAGGTGACACTATAATGGCCCTCCCAAGCGAACTGGAGATAATTCCTCCGAGGA 3001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3029 GCGGTGAAGGTGACACTATAATGGCCCTCCCAAGCGAACTGGAGATAATTCCTCCGAGGA 3088
Query 3002 AATCTGATCGTGTCAAAATAGTTGGTGGCCAATATCGTGGGTCTACAGGTAAGCTGATCG 3061
|||| |||||||||||||||||||| || || ||||||||||||||||||||||||||||
Sbjct 3089 AATCCGATCGTGTCAAAATAGTTGGCGGTCAGTATCGTGGGTCTACAGGTAAGCTGATCG 3148
Query 3062 GAATCGACGGGTCTGACGGAATCGTTAAGATAGATGATAATCTTGACGTCAAGATTCTGG 3121
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3149 GAATCGACGGGTCTGACGGTATCGTTAAGATAGATGATAATCTTGACGTCAAGATTCTGG 3208
Query 3122 ACCTGGCCTTATTAGCCAAGTTTGTGCAACCTTGA 3156
||||||||||||||||||||||||||||||| |||
Sbjct 3209 ACCTGGCCTTATTAGCCAAGTTTGTGCAACCGTGA 3243
Score = 1230 bits (666), Expect = 0.0
Identities = 696/711 (98%), Gaps = 0/711 (0%)
Strand=Plus/Plus
Query 1499 AACACGTTCGAGTGTTTGCTGATCATGTTGTTGAGAGCTCAGAAGTGACAACTGGTGTTA 1558
|||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1661 AACATGTCCGAGTGTTTGCTGATCATGTTGTTGAGAGTTCAGAAGTGACAACTGGTGTTA 1720
Query 1559 CCAAAATTGGGGACTATGAACTTCATGATCTTGTGCTTCTGGATAACCTGAGCTTTGGAG 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1721 CCAAAATTGGGGACTATGAACTTCATGATCTTGTGCTTCTGGATAACCTGAGCTTTGGAG 1780
Query 1619 TAATTATACGACTAGAGAATGAAGCTTTTCAGGTTCTTAAAGGGGTTCCTGACAGACCAG 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1781 TAATTATACGACTAGAGAATGAAGCTTTTCAGGTTCTTAAAGGGGTTCCTGACAGACCAG 1840
Query 1679 AGGTTGCTCTTGTCAAACTCAGAGAAATCAAATGCAAAATTGAGAAGAAAATCAATGTTC 1738
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1841 AGGTTGCTCTTGTCAAACTCAGAGAAATCAAATGCAAACTTGAGAAGAAAATCAATGTTC 1900
Query 1739 AAGATCGCTACAAAAATGTCATTGCTGTGAAAGATGACGTCAGAGTCATCGAGGGTCCTA 1798
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1901 AAGATCGCTACAAAAATGTCATTGCTGTGAAAGATGACGTCAGAGTGATCGAGGGTCCTA 1960
Query 1799 GCAAAGGTAAACAAGGTCCGGTGAAGCATATCTACAAAGGAGTCTTATTTATATATGATC 1858
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1961 GCAAAGGTAAACAAGGTCCTGTAAAGCATATCTACAAAGGAGTCTTATTTATATATGATC 2020
Query 1859 GGCATCACCTTGAGCATGCTGGATTTATCTGCGCTAAATGCACATCATGCATTGTTGTTG 1918
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2021 GACATCACCTTGAGCATGCTGGATTTATCTGCGCTAAATGCACATCATGCATTGTTGTTG 2080
Query 1919 GTGGATCACGTTCTGGCGCTAATAGAAATGGTGGTGATTCTTTTTCAAGGTATGGCAATT 1978
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2081 GTGGATCACGTTCTGGTGCTAATAGAAATGGTGGTGATTCGCTTTCAAGGTATGGCAATT 2140
Query 1979 TCAAGGCACCTGCCCCAGTACCCTCATCCCCAGGAAGATTTCAACGTGGCAGAGGCGGAG 2038
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2141 TCAAGGCACCTGCCCCAGTACCCTCATCTCCAGGAAGATTTCAACGTGGCAGAGGCGGAG 2200
Query 2039 GATATAATAACTCTGGAGGGAGGCATGGGGGCGGAAGAGGACGGGGAGACGATTCTTTGT 2098
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2201 GATATAATAACTCTGGAGGGAGGCATGGGGGTGGAAGAGGACGGGGAGACGATTCTTTAT 2260
Query 2099 TGGGTACTACTGTTAAGATCCGTCTAGGACCTTTCAAGGGGTATAGGGGACCTGTAGTAG 2158
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2261 TGGGTACTACTGTTAAAATCCGTCTAGGACCTTTCAAGGGGTATAGGGGACCTGTAGTAG 2320
Query 2159 AAGTGAAAGGAAATTCAGTGCGTGTAGAACTTGAGATGAAGATTGTGACAG 2209
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2321 AAGTGAAAGGAAATTCAGTGCGTGTAGAACTTGAGATGAAGATTGTGACAG 2371
> AT2G34210.1 | Symbols: | Transcription elongation factor Spt5
| chr2:14445938-14450522 FORWARD LENGTH=2970
Length=2970
Score = 1062 bits (575), Expect = 0.0
Identities = 868/1010 (86%), Gaps = 18/1010 (2%)
Strand=Plus/Plus
Query 499 GTTGAGCAACAAGCGCTTTTGCCATCAGTTCGCGACCCGAAATTGTGGATGGTGAAATGT 558
||||| ||||||||||||||||||||||| || ||||| ||| ||||| |||||||||||
Sbjct 469 GTTGATCAACAAGCGCTTTTGCCATCAGTCCGTGACCCTAAACTGTGGCTGGTGAAATGT 528
Query 559 GCGATTGGTCGCGAAAGGGAGGTTGCTGTTTGTCTTATGCAAAAATTTATAGATCGAGGA 618
|||||||| || ||||| || |||||||||||||||||||||||| | ||||| |||||
Sbjct 529 GCGATTGGACGTGAAAGAGAAGTTGCTGTTTGTCTTATGCAAAAAATCGTAGATAGAGGA 588
Query 619 GCTGATTTGCA-GATTAGATCTGTTGTTGCCCTTGACCATCTT-AAGAATTATATATATG 676
| || || || ||||||||||| | |||| ||||| |||||| || || ||| |||||
Sbjct 589 TCAGAGTT-CAAGATTAGATCTGCTATTGCTCTTGATCATCTTCAA-AACTATGTATATA 646
Query 677 TTGAAGCAGACAAGGAAGCTCATGTGAAAGAGGCAATCAAGGGCATGAGGAATATATATG 736
||||||| || | ||||||||||||||||||||| |||||||||||| ||||||| ||||
Sbjct 647 TTGAAGCGGATATGGAAGCTCATGTGAAAGAGGCTATCAAGGGCATGCGGAATATTTATG 706
Query 737 CTAATCAGAAGATCTTACTTGTCCCGATAAGAGAAATGACAGATGTGCTTTCTGTTGAAA 796
||||||||||||| || |||||||| |||| ||||||||| | ||| |||||||| || |
Sbjct 707 CTAATCAGAAGATTTTGCTTGTCCCCATAAAAGAAATGACTGCTGTTCTTTCTGTCGAGA 766
Query 797 GCAAAGCAATTGATCTATCTCGGGA-TACCTGGGTTAGAATGAAAATCGGGACGTATAAA 855
| |||||||| ||| |||| || || | | ||||||||||||||| | |||| |||||
Sbjct 767 GTAAAGCAATCGATTTATCCCGTGACT-CGTGGGTTAGAATGAAACTTGGGATATATAAG 825
Query 856 GGTGATCTTGCAAAGGTAGTTGACGTTGATAATGTGCGTCAGAGGGTCACAGTCAAGTTA 915
|||||||| || |||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct 826 GGTGATCTAGCTCAGGTGGTTGATGTTGATAATGTACGTAAGAGGGTCACAGTCAAGTTG 885
Query 916 ATCCCAAGAATTGATCTGCAGGCACTAGCCAGTAAGCTGGACGGAA--GAGAAGTTTCAA 973
||||||||||||||||||||||| ||||||| ||||||||| |||| ||||| | ||||
Sbjct 886 ATCCCAAGAATTGATCTGCAGGCTCTAGCCAATAAGCTGGAAGGAACAGAGAA-TGTCAA 944
Query 974 AGAAAAAAGCCTTTGTTCCACCTCCACGTTTCATGAACATTGATGAAGCAAGGGAA-TTG 1032
||| ||||| |||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 945 -GAAGAAAGCTTTTGCTCCACCTCCACGTTTCATGAACATTGATGAGGCAAGGGAACTT- 1002
Query 1033 CACATACGTGTTGAGCGTCGGCGTGATCCCATGACGGGTGATTACTTTGAAAATATTGGT 1092
|||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| |||
Sbjct 1003 CACATACGTGTTGAGCACCGGCGTGATCCAATGACGGGTGACTACTTTGAGAATATCGGT 1062
Query 1093 GGCATGCTTTTCAAAGATGGTTTTATGTACAA-AACAGTATC-ATTGAAGTCCATCACTG 1150
|| ||||||||||||||||||||| | ||||| || |||||| | ||||||||| |||
Sbjct 1063 GGAATGCTTTTCAAAGATGGTTTTCTTTACAAGAA-AGTATCGAC-GAAGTCCATTGCTG 1120
Query 1151 TTCAGAATGTTACACCAACTTTTGACGAACTTGAAAAATTCAATAAACCAAGTGAAAATG 1210
||||||||| |||||||| || || |||||||||| |||||| | ||||| ||||||||
Sbjct 1121 CTCAGAATGTAACACCAACCTTCGATGAACTTGAAAGATTCAAGAGACCAAATGAAAATG 1180
Query 1211 GAGAGGGCGATTTTGGTGGTCTGTCAACTTTATTTGCAAACAGAAAGAAAGGG-CATTTC 1269
| ||| ||| || | || | ||| |||||||||||||| |||||||| ||| ||||||
Sbjct 1181 GGGAGATCGACTTCGTTGATGAGTCGACTTTATTTGCAAATAGAAAGAA-GGGTCATTTC 1239
Query 1270 ATGAAGGGTGATGCAGTTATTGTTATAAAGGGGGATCTGAAAAACTTGAAGGGTTGGGTT 1329
||||| |||||||| |||||||| || ||||||||||| |||||||||||||| ||| ||
Sbjct 1240 ATGAAAGGTGATGCGGTTATTGTGATCAAGGGGGATCTTAAAAACTTGAAGGGCTGGATT 1299
Query 1330 GAGAAAGTAGATGAAGAAAATGTCCTTATCAGATCAGAAATGAAAGGTCTCCCTGATCCT 1389
||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||| |||||
Sbjct 1300 GAGAAAGTAGATGAAGAGAATGTCCTTATCAGATCAGAGATGAAAGATCTTCCTAATCCT 1359
Query 1390 CTTGCTGTAAATGAGAGAGAGCTTTGCAAGTACTTTGAACCTGGAAATCATGTGAAGGTT 1449
|||| || |||| |||||||||||| || |||||||||||||||||| ||||||||||
Sbjct 1360 ATTGCGGTTAATGGGAGAGAGCTTTGTAAATACTTTGAACCTGGAAATTTTGTGAAGGTT 1419
Query 1450 GTTTCTGGGACCCATGAAGGAGCAACAGGCATGGTTGTCAAAGTTGATCA 1499
|| ||||| | ||||||||||| ||| |||||| ||||||||||||||||
Sbjct 1420 GTGTCTGGCATCCATGAAGGAGGAACTGGCATGATTGTCAAAGTTGATCA 1469
Score = 370 bits (200), Expect = 5e-101
Identities = 345/414 (83%), Gaps = 14/414 (3%)
Strand=Plus/Plus
Query 1516 GCTGATCATGTTGTTGAGAGCT-CAGAAGTGAC-AACTGGTGTTACCAAAATTGGGGACT 1573
||||||||||||| |||| | |||||||||| || ||||| || |||||||||||||
Sbjct 1522 GCTGATCATGTTGCCAAGAG-TGCAGAAGTGACTAA-AGGTGTCACAAAAATTGGGGACT 1579
Query 1574 ATGAACTTCATGATCTTGTGCTTCTG-GATAACCTGAGCTTTGGAGTAATTATACGACTA 1632
|||||||||||||||||||| |||| | | || | |||||||||||||| || |||
Sbjct 1580 ATGAACTTCATGATCTTGTGATTCTAAG-TGACTTTAGCTTTGGAGTAATCCTAAAACTT 1638
Query 1633 GAGAATGAAGCTTTTCAGGTTCTTAAAGGGGTTCCTGACAGAC-CAGAGGT-TGCTCTTG 1690
|| | ||||||| | ||| |||||||||||||||||||||| | ||||||| | || |||
Sbjct 1639 GATAGTGAAGCTATCCAGATTCTTAAAGGGGTTCCTGACAG-CTCAGAGGTCT-CTATTG 1696
Query 1691 TCAAA-CTCAGAGAAATCAAATGCAAAATT-GAGAAGAAAATCAATGTTCAAGATCGCTA 1748
||||| | ||| ||||| |||| ||||||| | ||||||||||||||| ||||| || ||
Sbjct 1697 TCAAAGC-CAGCGAAATAAAATACAAAATTTG-GAAGAAAATCAATGTGCAAGACCGTTA 1754
Query 1749 CAAAAATGTCATTGCTGTGAAAGATGACGTCAGAGTCATCGAGGGTCCTAGCAAAGGTAA 1808
|||||||||| | || |||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1755 CAAAAATGTCGTCGCGGTGAAAGATGTTGTCAGGGTCATTGAGGGTCCTAGCAAAGGTAA 1814
Query 1809 ACAAGGTCCGGTGAAGCATATCTACAAAGGAGTCTTATTTATATATGATCGGCATCACCT 1868
||||||||| ||| ||| |||||||||||||| || |||||| |||| |||||| ||||
Sbjct 1815 ACAAGGTCCAGTGGTGCAAATCTACAAAGGAGTGTTGTTTATACATGACCGGCATAACCT 1874
Query 1869 TGAGCATGCTGGATTTATCTGCGCTAAATGCACATCATGCATTGTTGTTGGTGG 1922
||| || |||||||||||||| ||| |||| |||| || || ||| ||||||
Sbjct 1875 TGAACACACTGGATTTATCTGCACTAGATGCTCATCTTGTGTTCTTGCTGGTGG 1928
> AT4G08360.1 | Symbols: | KOW domain-containing protein | chr4:5295933-5296978
FORWARD LENGTH=457
Length=457
Score = 287 bits (155), Expect = 5e-76
Identities = 242/283 (86%), Gaps = 10/283 (4%)
Strand=Plus/Plus
Query 2879 ACAGCGATGTGGGCGTCATCCGAGATGTTTCGGATGGAACGTGTAAAGTGTCTCTCGGGT 2938
||||||| || |||||||| |||||||| |||||||||| ||||||||||||||| ||||
Sbjct 149 ACAGCGAAGTAGGCGTCATTCGAGATGTCTCGGATGGAATGTGTAAAGTGTCTCTTGGGT 208
Query 2939 CCAGCGGTGAAGGTGACACTATAATGG-CCCTCCCAAGCGAACTGGAGATAATTCCTCCG 2997
| | || ||||||||||||||||||| ||| | |||||||| |||||||| ||| |||
Sbjct 209 CTGGTGGGGAAGGTGACACTATAATGGTCCC-CTCAAGCGAATTGGAGATAGTTCGTCCA 267
Query 2998 AGGAA-ATCTGATCGTGTCAAAATAGTTGGTGG-CCAATATCGTGGGTC-TACAGGTAAG 3054
||||| | ||||| ||| ||||| |||| || | ||| | |||| | |||| |||||
Sbjct 268 AGGAAGA-GTGATCATGTGAAAATCCTTGGGGGTTC-ATACCTTGGG-CTTACATGTAAG 324
Query 3055 CTGATCGGAATCGACGGGTCT-GACGGAATCGTTAAGATAGATGATAATCTTGACGTCAA 3113
||||||||||||||||||| | || | || ||||||||||||| |||||||||||||||
Sbjct 325 CTGATCGGAATCGACGGGT-TGGATGCTATTGTTAAGATAGATGGTAATCTTGACGTCAA 383
Query 3114 GATTCTGGACCTGGCCTTATTAGCCAAGTTTGTGCAACCTTGA 3156
||||||||||||||||||||||||||||||||||||||| |||
Sbjct 384 GATTCTGGACCTGGCCTTATTAGCCAAGTTTGTGCAACCATGA 426
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 156972364647
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5