BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg327275

Length=1488
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G11280.1 | Symbols: ACS6, ATACS6 | 1-aminocyclopropane-1-car...  2399    0.0  
  AT4G26200.1 | Symbols: ACS7, ATACS7 | 1-amino-cyclopropane-1-ca...  86.1    9e-16


> AT4G11280.1 | Symbols: ACS6, ATACS6 | 1-aminocyclopropane-1-carboxylic 
acid (acc) synthase 6 | chr4:6864097-6866116 FORWARD 
LENGTH=1753
Length=1753

 Score = 2399 bits (1299),  Expect = 0.0
 Identities = 1427/1490 (96%), Gaps = 4/1490 (0%)
 Strand=Plus/Plus

Query  1     ATGGTGTCTTTTGCAACAGAGAAGAAGCAAGATCTGAATCTATTGTC-AAGAATCGCCTC  59
             |||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct  72    ATGGTGGCTTTTGCAACAGAGAAGAAGCAAGATCTGAATCTATTGTCTAA-AATCGCCTC  130

Query  60    CGGTGACGGTCACGGCGAGAATTCATCTTATTTCGATGGTTGGAAAGCTTATGAAGAAAA  119
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  131   CGGTGACGGTCACGGCGAGAATTCCTCTTATTTCGATGGTTGGAAAGCTTATGAAGAAAA  190

Query  120   CCCATTTCACCCAATTGATAGACCTGATGGAGTTATTCAAATGGGTCTCGCTGAAAATCA  179
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  191   CCCATTTCACCCAATTGATAGACCTGACGGAGTTATTCAAATGGGTCTCGCTGAAAATCA  250

Query  180   GCTTTGTGGAGATTTGATGCGTAAATGGGTTTTAAAACATCCAGAAGCTTCGATTTGTAC  239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  251   GCTTTGTGGAGATTTGATGCGTAAATGGGTTTTAAAACATCCAGAAGCTTCGATTTGTAC  310

Query  240   ATCAGAAGGTGTGAATCAATTCAGTGACATTGCAATTTTTCAGGATTATCATGGCTTGCC  299
             ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct  311   ATCAGAAGGTGTGAATCAATTCAGTGACATTGCCATTTTTCAAGATTATCATGGCTTGCC  370

Query  300   TAAATTCAGACAAGCAGTAGCGAAATTTATGGAGAAGACAAGAAATAACAAAGTTAAGTT  359
             | ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  371   TGAATTCAGACAAGCTGTAGCGAAATTTATGGAGAAGACTAGAAATAACAAAGTTAAGTT  430

Query  360   TGATCCTGACCGGATTGTTATGAGCGGCGGCGCTACGGGCGCACACGAGACGGTTGCTTT  419
             ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct  431   TGATCCTGACCGGATTGTTATGAGCGGCGGCGCAACCGGAGCACACGAGACGGTTGCTTT  490

Query  420   CTGTTTAGCTAATCCCGGTGACGGTTTCTTAGTTCCGACTCCTTATTATCCAGGGTTTGA  479
             |||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||
Sbjct  491   CTGTTTAGCTAATCCCGGCGATGGTTTCTTAGTTCCAACCCCTTATTATCCAGGGTTTGA  550

Query  480   TAGAGATTTGAGATGGAGAACCGGAGTGAATCTTGTACCGGTTACTTGTCATAGCTCTGA  539
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  551   TAGAGATTTGAGATGGAGAACCGGAGTGAATCTTGTACCGGTTACTTGTCATAGCTCTAA  610

Query  540   TGGGTTTAAGATTACGGTGGAAGCCTTGGAAGCTGCTTATGAAAATGCGAGGAAATCGAA  599
             |||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct  611   TGGGTTCAAGATTACGGTGGAAGCCTTGGAAGCTGCTTACGAAAACGCGAGAAAATCGAA  670

Query  600   TATTCCGGTTAAGGGTTTACTTGTAACCAATCCTTCGAATCCGCTTGGTACGACGTTAGA  659
             |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct  671   TATTCCGGTTAAGGGTTTACTTGTAACCAATCCTTCAAACCCGCTTGGTACGACGTTAGA  730

Query  660   CCGGGAATGTTTGAAGTCTCTTGTTAACTTCACTAATGACAAAGGGATTCATCTTATTGC  719
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  731   CCGGGAATGTTTGAAGTCTCTTGTTAACTTCACTAATGACAAAGGGATTCATCTTATTGC  790

Query  720   TGATGAGATTTATGCTGCTACTACTTTTGGTCAATCCGAGTTTATAAGCGTTGCGGAAGT  779
             |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct  791   TGATGAGATTTATGCTGCTACTACTTTTGGTCAATCCGAGTTCATAAGTGTTGCGGAAGT  850

Query  780   GATTGAGGAGATCGAGGATTGTAACCGCGATTTGATCCATATTGTGTATAGTCTATCTAA  839
              || ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct  851   AATCGAGGAGATCGAAGATTGTAACCGCGATTTGATACATATTGTGTATAGTCTATCTAA  910

Query  840   AGATATGGG-CTTGCCTGGTTTAAGAGTTGGTATAGTGTACTCTTACAATGACCGGGTGG  898
             ||||||||| || |||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct  911   AGATATGGGTCT-GCCTGGTTTAAGAGTTGGTATAGTATACTCTTACAATGACAGGGTGG  969

Query  899   TTCAGATCGCAAGGAAAATGTCGAGTTTTGGTCTTGTTTCGTCGCAAACGCAGCATTTGA  958
             |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct  970   TTCAGATCGCAAGGAAAATGTCGAGTTTCGGTCTTGTTTCGTCACAAACGCAGCATTTGA  1029

Query  959   TTTCTAAAATGTTATCCGATGAAGACTTTGTAGACGAGTTCATCTGCGAGAGCAAATTGC  1018
             |  |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||
Sbjct  1030  TCGCTAAAATGTTATCCGATGAAGAGTTTGTAGACGAGTTTATCCGCGAGAGCAAATTGC  1089

Query  1019  GGTTAGCTGCAAGGCACGCGGAGATAACCACCGGTTTAGATGGTTTAGGCATTGGTTGGT  1078
             ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct  1090  GGTTAGCTGCAAGGCACGCTGAGATAACCACCGGTTTAGATGGTTTAGGGATTGGTTGGT  1149

Query  1079  TAAAGGCCAAAGCCGGTTTGTTCTTGTGGATGGATTTAAGAAATCTTTTGAAGACAGCTA  1138
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct  1150  TAAAGGCCAAAGCCGGTTTGTTCTTGTGGATGGATTTAAGAAATCTTTTGAAGACAGCAA  1209

Query  1139  CATTTGATTCGGAAACCGAACTATGGCGCGTAATTGTCCACCAAGTGAAGCTGAATGTGT  1198
             | |||||||||||||||||||||||||| || ||||| |||||||||||||| || ||||
Sbjct  1210  CGTTTGATTCGGAAACCGAACTATGGCGTGTGATTGTTCACCAAGTGAAGCTCAACGTGT  1269

Query  1199  CTCCTGGCGGTTCGTTCCATTGCCACGAACCGGGATGGTTTAGAGTATGTTTTGCAAATA  1258
             |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct  1270  CTCCAGGCGGTTCGTTCCATTGCCATGAACCGGGATGGTTTAGAGTATGTTTTGCGAATA  1329

Query  1259  TGGACCACAAGACGATGGAGACGGCTCTAGAGAGGATTAGAGTGTTCACTAGCCAACTTG  1318
             ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct  1330  TGGACCATAAGACGATGGAGACAGCTCTAGAGAGGATTAGAGTGTTCACTAGCCAACTTG  1389

Query  1319  AGGAGGAGACTAAACCGATGGCTGCAACAACAATGATGGCTAAGAAGAAGAAGAAGTGTT  1378
             ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct  1390  AGGAGGAGACTAAACCGATGGCTGCAACAACTATGATGGCTAAAAAGAAGAAGAAGTGTT  1449

Query  1379  GGCAAAGTAACCTCCGGTTAAGCTTTAGCGACACGAGGCGGTTCGATGATGGCTTCTTCT  1438
             |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  1450  GGCAGAGTAACCTCAGGTTAAGCTTTAGTGACACGAGGCGGTTCGATGATGGCTTCTTCT  1509

Query  1439  CGCCTCATTCACCGGTGCCGCCTTCTCCGCTGGTCCGTGCACAGACTTAA  1488
             |||||||||| || ||||||||||||||||| ||||||||||||||||||
Sbjct  1510  CGCCTCATTCGCCTGTGCCGCCTTCTCCGCTAGTCCGTGCACAGACTTAA  1559


> AT4G26200.1 | Symbols: ACS7, ATACS7 | 1-amino-cyclopropane-1-carboxylate 
synthase 7 | chr4:13275307-13277188 FORWARD LENGTH=1586
Length=1586

 Score = 86.1 bits (46),  Expect = 9e-16
 Identities = 59/65 (91%), Gaps = 1/65 (2%)
 Strand=Plus/Plus

Query  445  TTCTTAGTTCCGACTCCTTATTATCCAGGGTTTGATAGAGATTTGAGATGGAGAACCGGA  504
            ||| ||||||| || || ||||||||||| || |||||||||||||||||||||||||||
Sbjct  458  TTC-TAGTTCCCACACCGTATTATCCAGGATTCGATAGAGATTTGAGATGGAGAACCGGA  516

Query  505  GTGAA  509
            |||||
Sbjct  517  GTGAA  521



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 73393196790


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5