BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg327611 Length=681 Score E Sequences producing significant alignments: (Bits) Value AT4G01883.1 | Symbols: | Polyketide cyclase / dehydrase and li... 981 0.0 > AT4G01883.1 | Symbols: | Polyketide cyclase / dehydrase and lipid transport protein | chr4:813068-815170 FORWARD LENGTH=1139 Length=1139 Score = 981 bits (531), Expect = 0.0 Identities = 636/685 (93%), Gaps = 14/685 (2%) Strand=Plus/Plus Query 1 ATGTCTGCGACGGCGATTCTCTCTGTAACTAACCCTAACGCCGTCGTCTTCGGATTTGGT 60 |||||||| ||||| ||||||||||||| ||||||||| | | | ||| |||||||||| Sbjct 95 ATGTCTGCAACGGCAATTCTCTCTGTAAATAACCCTAAAGACTTAGTCACCGGATTTGGT 154 Query 61 AATCGGACA-TTCTGTTGTCGGAGCAACTTTACTAAACCCAGTTCGAGATTGTTT-C--C 116 ||||||||| ||| || |||||||||||| ||||||||||||||||||||||| | | Sbjct 155 AATCGGACATTTC-ATTCCCGGAGCAACTTTGCTAAACCCAGTTCGAGATTGTTTCCTTC 213 Query 117 TTCTTCTTCTCCGATGAAGCCTTTGACTCTTGATTCTAGATTCTCTCCTTTGATTTCAAC 176 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct 214 TTCTTCTTCTCCGATGAAGCCTTTGACCCTTGCTTCTAGATTCTCTCCTTTGATTTCAAC 273 Query 177 AAATAGGTCCTTGAAATCTTCAGTATTCAGGAGATTTAATACTCTCATGGAGTGGCAAGA 236 |||||| ||||| ||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 274 AAATAGATCCTTTAAATCTTCAGTCTTCAGGAGATTTGATACTCTCATGGAGTGGCAAGA 333 Query 237 ATGCAAAGTAAAGATGAAGGTAGAAGTGCCTGTATCAGTTGCTTATGGACTCTACTCGGA 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 334 ATGCAAAGTAAAGATGAAGGTAGAAGTGCCTGTATCAGTTGCTTATGGACTCTACTCGGA 393 Query 297 ACGTGAATCAATTCCTAAATGGATGACATTCATTTCATCTGTTAAGGTATTGAAGGACAA 356 ||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 394 ACGAGAATCAATTCCTAAATGGATGACATTTATTTCATCCGTTAAGGTATTGAAGGACAA 453 Query 357 ACCCGATTTATCTCGATGGACCTTGAAATATAAAGCATTTGGTCAGAATCTTGAGTACGC 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 454 ACCCGATTTATCTCGATGGACCTTGAAATATAAAGCATTTGGTCAGAATCTTGAGTACGC 513 Query 417 TTGGCTTGCTAAGAACTTGCAGGCAATTTCACCTCTCCCGAATCAGAAAATACATTGGAT 476 |||||||||||||||||||||| | | |||||| || || |||||||| ||||| Sbjct 514 TTGGCTTGCTAAGAACTTGCAG-C-----C---TCTCCCAAACCAAAAAATACACTGGAT 564 Query 477 TTCTCTAGAAGGCCTTCCTAACAAGGGCACTGTCCGCTTTTTCCCGCTAGGACCTTCATC 536 |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 565 TTCTCTTGAAGGGCTTCCTAACAAGGGCACTGTCCGGTTTTTCCCGCTAGGACCTTCATC 624 Query 537 ATGTGAAGTAGAACTAACCTTTGCATATGAAGTTCCCCTGCTACTTATACCATTTGCAGC 596 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 625 ATGTGACGTAGAACTAACCTTTGCATATGAAGTTCCACTGCTACTTATACCATTTGCAGC 684 Query 597 GGCGCTTCAACCGCTCATGCAAGGATTGATCAAGAATAGTTTGGAGCAATTTGCAGAGAT 656 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 685 AGCGCTTCAACCGCTAATGCAAGGATTGATCAAGAACAGTTTGGAGCAATTTGCAGAGAT 744 Query 657 TGCAAAAAGCACAAAGACCACTTAG 681 |||||||||||||||||||||||| Sbjct 745 AGCAAAAAGCACAAAGACCACTTAG 769 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32953600432 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5