BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg328325 Length=426 Score E Sequences producing significant alignments: (Bits) Value AT4G34190.1 | Symbols: SEP1 | stress enhanced protein 1 | chr4:... 634 0.0 > AT4G34190.1 | Symbols: SEP1 | stress enhanced protein 1 | chr4:16372388-16373626 REVERSE LENGTH=774 Length=774 Score = 634 bits (343), Expect = 0.0 Identities = 414/444 (93%), Gaps = 21/444 (5%) Strand=Plus/Plus Query 1 ATGGCCTTATCTCAAGTCTCTGCGTCTCGCGCCTTTTCTCTTCCCAATTC---TG----- 52 ||||||||||||||||| |||||||||| ||||||||||||||||||||| || Sbjct 116 ATGGCCTTATCTCAAGTGTCTGCGTCTCTCGCCTTTTCTCTTCCCAATTCTGGTGCCCTA 175 Query 53 --G-T-------ATCACAAACCCAAGTTCTACTTGTCGGGTTCATGTTCCGCAACTTGCT 102 | | ||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 176 AAGCTAGCCACAATCACAAACCCAACTTCTACATGTCGGGTTCATGTTCCGCAACTTGCT 235 Query 103 GGAATCCGATCCACCTTCGCTTCTGGTTCTCCTCTCTTGCCATTGAAGTTGAGTATGACT 162 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 236 GGAATCCGATCCACCTTCGCTTCTGGTTCTCCTCTCTTGCCATTGAAGTTGAGTATGACC 295 Query 163 CGTAGAGGAGGAAGAAACAGAGCAGCATCAGTTTCAATTAGAAGTGAGCAAAGTACAGAA 222 ||||||||| | |||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 296 CGTAGAGGA-G--GAAACAGAGCAGCATCAGTTTCCATAAGAAGTGAGCAAAGTACAGAA 352 Query 223 GGAAGCAGTGGTTTGGACATATGGCTTGGTCGTGGCGCCATGGTTGGTTTTGCAGTTGCC 282 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 353 GGAAGCAGTGGTTTGGATATATGGCTTGGTCGTGGCGCCATGGTTGGTTTTGCAGTTGCC 412 Query 283 ATTACTGTTGAGATTTCAACTGGAAAAGGACTTCTTGAGAATTTTGGAGTAGCAAGTCCA 342 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 413 ATTACTGTTGAGATTTCCACTGGAAAAGGACTTCTTGAGAATTTTGGAGTAGCAAGTCCA 472 Query 343 TTGCCTACGGTTGCTTTAGCTGTTACAGCATTGGTTGGTGTTCTAGCTGCGGTTTTCATC 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 473 TTGCCTACGGTTGCTTTAGCTGTTACAGCATTGGTTGGTGTTCTAGCTGCGGTTTTCATC 532 Query 403 TTCCAATCTTCTTCTAAAAACTGA 426 |||||||||||||||||||||||| Sbjct 533 TTCCAATCTTCTTCTAAAAACTGA 556 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20207635098 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5