BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg332111 Length=567 Score E Sequences producing significant alignments: (Bits) Value AT5G58240.1 | Symbols: FHIT | FRAGILE HISTIDINE TRIAD | chr5:23... 817 0.0 > AT5G58240.1 | Symbols: FHIT | FRAGILE HISTIDINE TRIAD | chr5:23558114-23559353 REVERSE LENGTH=818 Length=818 Score = 817 bits (442), Expect = 0.0 Identities = 466/478 (97%), Gaps = 0/478 (0%) Strand=Plus/Plus Query 90 GTCTACTTGTTCTTCGTACGCATTTGGGCCTTACAAAATCGATCCTCGTGAAGTGTTCTA 149 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 106 GTCTACTTGTTCTTCGTACGCATTTGGGCCGTACAAAATCGATCCCCGTGAAGTGTTCTA 165 Query 150 CGCAACGCCTCTCTCTTATGCCATGGTTAATCTCCGTCCGCTTCTTCCTGGTCATGTTCT 209 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 166 CGCAACGCCTCTCTCTTATGCCATGGTTAATCTCCGTCCGCTTCTTCCTGCACATGTTCT 225 Query 210 TGTCTGCCCGAGGCGCCTTGTGCCACGATTTACTGATCTTACAGCTGATGAGACCAGTGA 269 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 226 TGTCTGCCCGAGACGCCTTGTGCCACGATTTACTGATCTTACAGCTGATGAGACCAGTGA 285 Query 270 TCTGTGGCTTACTGCTCAGAAGGTTGGCTCTAAGCTTGAGACCTTCCATAATGCGTCTTC 329 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 286 CCTGTGGCTTACTGCTCAGAAGGTTGGCTCTAAGCTTGAGACCTTCCATAATGCGTCTTC 345 Query 330 TCTCACATTAGCTATCCAAGATGGCCCTCAAGCGGGACAGACTGTTCCCCATGTACACAT 389 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 346 TCTCACATTAGCCATCCAAGATGGCCCTCAAGCGGGACAGACTGTTCCCCATGTACACAT 405 Query 390 TCACATCTTGCCTCGTAAAGGTGGTGACTTTGAGAAGAATGATGAAATCTATGATGCTCT 449 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406 TCATATCTTGCCTCGTAAAGGTGGTGACTTTGAGAAGAATGATGAAATCTATGATGCTCT 465 Query 450 TGATGACAAGGAGAAGGAACTGAAGCAGAAGCTTGATCTAGATAAAGACCGGGTTGATAG 509 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 466 TGATGAGAAGGAGAAGGAACTGAAGCAGAAGCTTGATCTAGATAAAGACCGGGTTGATAG 525 Query 510 GGGCATTCAGGAGATGGCTGACGAGGCTTCCAAATACAGATCTCTTTTTGATTGCTAG 567 | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct 526 GAGCATTCAGGAGATGGCTGACGAGGCTTCCCAATACAGATCTCTTTTCGATTGCTAG 583 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27226907674 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5