BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg332145 Length=1524 Score E Sequences producing significant alignments: (Bits) Value AT5G58560.1 | Symbols: | Phosphatidate cytidylyltransferase fa... 1096 0.0 AT5G58575.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Sgf11, tr... 782 0.0 AT5G58570.1 | Symbols: | unknown protein; Has 30201 Blast hits... 195 1e-48 > AT5G58560.1 | Symbols: | Phosphatidate cytidylyltransferase family protein | chr5:23670395-23672877 FORWARD LENGTH=1349 Length=1349 Score = 1096 bits (593), Expect = 0.0 Identities = 759/836 (91%), Gaps = 23/836 (3%) Strand=Plus/Plus Query 7 ACTACTACTAAGctctccgttctctgctgctctttcatttcatctcctctcattgactct 66 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 134 ACTACTACAAAGCTCTCCGTTCTCTGCTGCTCTTTCATTTCATCTCCTCTCGTTGACTCT 193 Query 67 cctccttctccCGCCAACATCCCTCGCTTCTTCTCTCCGATTCCACGA-T-TCC---TCA 121 |||||||||| |||| | || ||| | ||| | ||||||| | | | ||| || Sbjct 194 CCTCCTTCTCTCGCCTTCTTCTCTC-C-GATTC-C-ACGATTCCTC-ACTGTCCGAATCG 248 Query 122 CTACTAGCTTTAGATCGAGCTCTAGGTTTCCGGCGACCGAAATCCGTAAGTC-T-ACTCG 179 | |||||||||||||||||||||||||||||||| ||| ||||||| ||||| | ||||| Sbjct 249 CGACTAGCTTTAGATCGAGCTCTAGGTTTCCGGCCACCAAAATCCGCAAGTCTTCACTCG 308 Query 180 GAGTC-TAACGACGT-C-G--TCTTCCACTCGCCGC-CATGTCTGCGCGTTTGGAGTCAC 233 | | | | | | | | || | | | |||||||||||||||||||||| Sbjct 309 CCGCCGTGATG-TTTCCGGAAAATT-CGGTTTTATCAGATGTCTGCGCGTTTGGAGTCAC 366 Query 234 TAGCATCGTTGCGTTCTCTTGCCTCGGTTTCTGGGGAGAGATTGGCAAACGTGGCCTCTT 293 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 367 TAGCATCGTTGCGTTCTCGTGCCTCGGTTTCTGGGGAGAGATTGGCAAACGTGGCATCTT 426 Query 294 GGACCAGAAACTCATCCGGAAGCTTGTGCATATAAATATTGGGCTAGTTTTTATGCTTTG 353 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 427 CGACCAGAAACTCATCCGGAAGCTTGTGCATATAAATATTGGGCTAGTTTTTATGCTTTG 486 Query 354 CTGGCCGCTGTTCAGTTCTGGAATCCAAGGAGCACTTTTTGCATCTCTTGTACCTGGACT 413 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 487 CTGGCCGCTGTTCAGTTCTGGAATCCAAGGAGCACTTTTCGCATCTCTTGTACCTGGACT 546 Query 414 CAATATAATAAGGATGCTATTGCTGGGGCTTGGAGTGTACCACGACGAAGGAACGATCAA 473 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 547 CAATATAGTAAGGATGCTATTGCTGGGGCTTGGAGTGTACCACGACGAAGGAACAATCAA 606 Query 474 GTCAATGAGCAGACATGGAGATCGCAGGGAACTACTTAAGGGACCGCTTTACTATGCACT 533 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 607 GTCAATGAGCAGACATGGAGATCGCAGGGAACTACTTAAGGGGCCGCTTTACTATGTACT 666 Query 534 GTCAATCACATCAGCCTGCATCTTCTATTGGAAGTCATCCCCAATCGCCATTGCAGTCAT 593 ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| || || Sbjct 667 GTCAATCACATCAGCCTGCATCTACTATTGGAAATCATCCCCAATCGCGATTGCGGTGAT 726 Query 594 ATGCAACCTTTGCGCAGGAGATGGTATGGCTGACATCGTGGGTCGGCGGTTTGGAACAGA 653 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 727 ATGCAACCTTTGCGCAGGAGATGGTATGGCTGACATTGTGGGTCGGCGGTTTGGAACAGA 786 Query 654 GAAGCTTCCTTACAACAAAAACAAATCATTTGCTGGTAGCATTGGAATGGCCACCGCGGG 713 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 787 GAAGCTTCCTTACAACAAAAACAAATCATTTGCTGGTAGCATTGGAATGGCCACCGCCGG 846 Query 714 GTT-CTTAGCATCTGTTGGGTATATGTTCTACTTTGCTTCATTCGGTTACATCAAGGATA 772 ||| || ||||||||||| |||||||| ||||||||||||||| ||||||||| |||||| Sbjct 847 GTTTCT-AGCATCTGTTGCGTATATGTACTACTTTGCTTCATTTGGTTACATCGAGGATA 905 Query 773 GCGGGGGAATGATTCTTCGTTTCCTCATCATCTCTTTAGCATCAGCTCTTGTCGGA 828 |||||||||||||||||||||||||| |||||||| |||||||||||||||| ||| Sbjct 906 GCGGGGGAATGATTCTTCGTTTCCTCGTCATCTCTATAGCATCAGCTCTTGT-GGA 960 > AT5G58575.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23674000-23675498 FORWARD LENGTH=956 Length=956 Score = 782 bits (423), Expect = 0.0 Identities = 479/507 (94%), Gaps = 0/507 (0%) Strand=Plus/Plus Query 1018 CTTTCGTCCCAAGTTTTTCTTGATCTTGTGGATTCGGTGATTGCTGATGTAGCATCTGAG 1077 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 176 CTTTCGTCCCAAATTTTTCTTGATCTTGTGGATTCGGTGATAGCTGATGTAGCATCTGAG 235 Query 1078 TGTCATCGGGTAGCACGACTAGGACTTGATCGTGATTTGGAGGTAGTAGAAGAAGAGTTG 1137 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 236 TGTCATCGGGTAGCACGACTAGGACTTGATCGTGATTTGGATATAGTAGAAGAAGAGTTG 295 Query 1138 AGGTTGTCAGTGGAAGCGTGTGCTAAGGTCGCTGATCCTAGCAACAACCTTGAAACCAAC 1197 || ||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||| Sbjct 296 AGATTGTCAGTGGAAGCGCGTGCGAAGATCGCTGATCCTAGCAACAACCTCGAAACCAAC 355 Query 1198 ACCAAATTTGTTGTTGATATTTTTGGTCAGACTCACCCTCCTGTAGCTACTGAAGTGTTC 1257 ||||||| |||||||||||| ||||| |||||||||||||||||||||| |||||||||| Sbjct 356 ACCAAATATGTTGTTGATATATTTGGGCAGACTCACCCTCCTGTAGCTAGTGAAGTGTTC 415 Query 1258 AATTGCATGAACTGTGGGCGACAAATTGTTGCAGGAAGGTTTGCTCCTCATTTGGAAAAA 1317 ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 416 AATTGCATGAACTGTGGGCGACAAATTGTTGCAGGAAGGTTTGCTCCTCATCTCGAAAAA 475 Query 1318 TGCATGGGGAAGGGAAGAAAGGCTCGTGCCAAGACAACCAGGAGCACAACAGCTGCCCAG 1377 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct 476 TGCATGGGAAAGGGAAGAAAGGCTCGTGCCAAGACAACCAGAAGCACAACGGCTGCACAG 535 Query 1378 AACAGGAACGCACGACGCAGCCCAAATCCGCGATATTCTCCTTATCCAAATTCTGCTAGT 1437 ||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 536 AACCGGAATGCACGACGCAGCCCCAATCCACGATATTCTCCTTATCCAAATTCTGCTAGT 595 Query 1438 GAGAACCAGTTAGCAAGTGGATCACCTGGTGTTGCTGGTGAAGACTGCTCAAATGGCACA 1497 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 596 GAGAACCAGTTAGCAAGTGGATCACCTGGTGTTGCAGGTGAAGACTGCTCAAATTTCACA 655 Query 1498 GTCCGAGAGAATGTGAAAGGAGACTGA 1524 || |||||||| ||||||||||||||| Sbjct 656 GTTCGAGAGAACGTGAAAGGAGACTGA 682 > AT5G58570.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:23672695-23673287 REVERSE LENGTH=593 Length=593 Score = 195 bits (105), Expect = 1e-48 Identities = 121/129 (94%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 823 GTCGGACTGGTGACTGTAACGGCGTTTCAGACAAGGAAGCAATACAAGGAACAAGAGAAA 882 |||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || Sbjct 343 GTCGGACTGGTGACTGTAACGGCGTTTCAGACAAGGAAGCAACACGAGGAACAAGAGGAA 284 Query 883 GAGGGCAAACCCGATGACAAGAACTACTGTCAAGATCTCACCATGCATGGCGTAGTGTCT 942 || ||| || | ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 283 GACGGCGAAGCTGATGACAAGAACTACCGTCAAGATCTCACCATGCATGGCGTAGTGTCT 224 Query 943 GTCTCTAGT 951 ||||||||| Sbjct 223 GTCTCTAGT 215 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75200416410 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5