BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg332964 Length=579 Score E Sequences producing significant alignments: (Bits) Value AT5G66005.3 | Symbols: | Expressed protein | chr5:26397672-263... 902 0.0 > AT5G66005.3 | Symbols: | Expressed protein | chr5:26397672-26399274 REVERSE LENGTH=922 Length=922 Score = 902 bits (488), Expect = 0.0 Identities = 549/579 (95%), Gaps = 2/579 (0%) Strand=Plus/Plus Query 1 ATGGCAGGCACCGGGAAATGCCTTCTTGTCACCGGCCCTCCTGGTGTCGGAAAAACCACA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 152 ATGGCAGGCACCGGGAAATGCCTTCTTGTCACCGGCCCTCCTGGTGTCGGAAAAACCACA 211 Query 61 TTGATCATGAGAGTGTTCGACATGATTAGGGTTTCCAACCCTAACTTAAAGATCCAAGGT 120 ||||||||||||||||| || ||||| ||||||||||||||||||||||| ||||| ||| Sbjct 212 TTGATCATGAGAGTGTTGGATATGATGAGGGTTTCCAACCCTAACTTAAAAATCCAGGGT 271 Query 121 TTCTACACTCAAGAGATGAGGGAACGAGGACAAAGGGTTGGTTTTCAAGTGGTCACCTTG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 272 TTCTACACTCAAGAGATGAGGGAACGAGGACAAAGGGTTGGTTTTCAAGTGGTCACTTTG 331 Query 181 GATGGCCGCACAAGTTTGCTTGCTTCTTCCACTGTTTCTAGTCAAGAATCAATGACATGG 240 ||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct 332 GATGGCCGCACAAGTTTGCTTGCTTCTTCTATTGTTTCTAGTCAAGAATCGATGACATGG 391 Query 241 CCTAATGTTGGCAAGTACAAAGTGGACATTGCATCCTTCGAGTCTATAGCATTGCCTGAG 300 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 392 CCTAGTGTTGGCAAGTACAAAGTGGACATTGCATCCTTCGAGTCTATAGCCTTGCCTGAG 451 Query 301 CTTCAGGTCAAAGACGATACCCATCTTTTCATCATTGATGAAGTTGGCAAGATGGAGATG 360 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 452 CTACAGGTCAAAGACGATACCAATCTTTTCATCATTGATGAAGTTGGCAAGATGGAGATG 511 Query 361 TTTAGTCCATCCTTCTTTCCGGCTGCCCTCAAGGTTTTGGGGTCCAACATTCCTCTTCTT 420 |||||||||||||| |||||||||| |||||| ||||||| |||||| ||||||||||| Sbjct 512 TTTAGTCCATCCTTTTTTCCGGCTGTCCTCAATGTTTTGGACTCCAACGTTCCTCTTCTT 571 Query 421 ACTTCCATTCCTATCCCAAAATTTGGTCGAGATCTTCCTGGAGTGGCAAGGTTGAAGAAC 480 |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 572 GCTTCCATTCCTAGCCCAAAATTTGGTCGACATCTTCCTGAAGTGGCAAGGTTGAAGAAC 631 Query 481 CAACCGGGAGTGACTGTAATCACCCTGAGTGAGAGTAACAGAGACTCC-ATGAAAGAACA 539 ||||||||||||| ||||||| ||||||||| || ||||||||| ||| ||||||||||| Sbjct 632 CAACCGGGAGTGAATGTAATCTCCCTGAGTGCGACTAACAGAGA-TCCCATGAAAGAACA 690 Query 540 TATCTTTGATGTTTTCTCTGGATGGCTGCCCAAGCAATA 578 ||||||||||||||||||||| ||||||||||||||||| Sbjct 691 TATCTTTGATGTTTTCTCTGGTTGGCTGCCCAAGCAATA 729 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27829717438 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5