BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg333107
Length=2427
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43745.1 | Symbols: | Protein of unknown function (DUF1012)... 3751 0.0
AT5G02940.1 | Symbols: | Protein of unknown function (DUF1012)... 2772 0.0
> AT5G43745.1 | Symbols: | Protein of unknown function (DUF1012)
| chr5:17569147-17574971 REVERSE LENGTH=2759
Length=2759
Score = 3751 bits (2031), Expect = 0.0
Identities = 2328/2464 (94%), Gaps = 50/2464 (2%)
Strand=Plus/Plus
Query 1 ATGGTGGCTGTTCAGTTATTTACCTGGAAGCCATTGATTCT-C--CCTT--C-A----C- 49
||||||||||||||||| ||||| |||||||||||| |||| | |||| | | |
Sbjct 21 ATGGTGGCTGTTCAGTTGTTTACTTGGAAGCCATTGGTTCTACTACCTTCACAATCTTCA 80
Query 50 -GAGTAGATCGATTCGCGTCTTTTAACAGGAGCTTGAGTTTAAAGTCTCTACCTTTAGGT 108
|| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 81 AGACTAGATCGATTCGCGTCTTTTAACAGGAGCTTGAGTTTAAAGTCTCTGCCTTTAGGT 140
Query 109 GGGATTGAGTCTTTTAGATGCCCAGGGACCTTCAAAGTCAAATCTCAGAGGACAGGAGAC 168
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 141 GGGATTGGGTCTTTTAGATGCCCAGGGACCTTCAAAGTCAAATCTCAGAGGACAGGAGAC 200
Query 169 ACAGAGCCG-C--CTAGTGTTAACCTGAATGATTTTAATTCCAAATTCCATAAGAGTCTT 225
|| |||||| | ||||||| |||||||||||||| | ||||| ||| ||||||||||||
Sbjct 201 ACTGAGCCGTCTTCTAGTGTCAACCTGAATGATTTCAGTTCCATATTGCATAAGAGTCTT 260
Query 226 CCATATAAACTGGTGGTAGGATGCATCCCACTGTATGTGGTGTTCAGGATAGCGCAAAAG 285
|| |||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 261 CCGTATAAAGTGGTGATAGGATGCATCCCACTGTATGCGGTGTTCAGGATAGCGCAAAAG 320
Query 286 ATATGTCAAGAGCTTCCCCTCCTCGTTCAGAACTCAGTGGGGGCTGGCTTGCCTTTTGCT 345
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 321 ATATGTCAAGAGCTTCCTCGCCTCGTTCAGAACTCAGTGGGGGCTGGCTTGCCTTTTGCT 380
Query 346 TGTGCATCGAACTCTCTACCTACTCCTCTCAAGTTGGACGTCTCCGTTCCTTCTTTTCAA 405
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 381 TGTGCATCGAACTCTCTACCTACTCCTCTCAAGTTGGATGTCTCATTTCCTTCTTTTCAA 440
Query 406 GATATCAGATGGGGTCTTGCAAGGTTTCTTTACCTGTTCAATATTCAGCTTGAGAAGAAC 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441 GATATCAGATGGGGTCTTGCAAGGTTTCTTTACCTGTTCAATATTCAGCTTGAGAAGAAC 500
Query 466 ATTGGCACGTTCCTTGTGGCGCTCATGATAGCATGTGTATCGTTTGTTATCATTGGGGGA 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 501 ATTGGCACGTTCCTTGTGGCGCTCATGATAGCATGTGTATCGTTTGTTATCATTGGGGGA 560
Query 526 CTCCTA-TTTTCAAATTC-----AGACCTACCATTAGAAGACTGCCTTTGGGAAGCCTGG 579
|||||| ||||||||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct 561 CTCCTATTTTTCAAATTCAGGAAAGACCTACCCTTAGAAGACTGCCTCTGGGAAGCCTGG 620
Query 580 GCATGCCTCATATCCTCTTCTACTCATCTGAAGCAAAAGACACGCATAGAAAGAGTCATT 639
||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 621 GCATGCCTCATTTCCTCTTCTACTCATCTTAAGCAAAAGACACGCATTGAAAGAGTCATT 680
Query 640 GGATTTGTCCTAGCCATTTGGGGAATATTGTTTTACTCTCGGCTTTTAAGCACAATGACA 699
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 681 GGATTTGTCCTAGCCATTTGGGGAATATTGTTTTACTCTCGGCTATTAAGCACAATGACA 740
Query 700 GAACAATTTCGGTATAATATGACAAAACTGAGGGAAGGGGCACAGATGCAAGTCCTAGAA 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GAACAATTTCGGTATAATATGACAAAACTGAGGGAAGGGGCACAGATGCAAGTCCTAGAA 800
Query 760 GCTGATCATATCATCATTTGTGGAATAAACAGTCATCTACCTTTCATACTAAAGCAACTG 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 801 GCTGATCATATCATCATTTGTGGAATAAACAGTCATCTACCTTTCATACTAAAGCAACTG 860
Query 820 AACAGCTACCATGAGCATGCTGTCCGCTTAGG----G--A-AGC-----AG---AGACTT 864
||||| || ||||||||||||||||||||||| | | ||| || ||||||
Sbjct 861 AACAGTTATCATGAGCATGCTGTCCGCTTAGGTACCGCCACAGCTAGGAAGCAAAGACTT 920
Query 865 CTGCTCATGTCTGATACTCCAAGGAAGCAGATGGACAAGCTAGCTGAGGCGTACTCCAGA 924
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 921 CTGCTCATGTCCGATACTCCAAGGAAACAGATGGACAAGCTAGCTGAGGCGTACTCCAAA 980
Query 925 GA-TTTAATCATATTGATATCCTTACACAGAGGTAAACTGTGCAGTTGTAGTCTTAACAT 983
|| |||||||||||||| |||||| || ||| | ||||||||||||||| |
Sbjct 981 GATTTTAATCATATTGACATCCTT--AC------AAA----G-AGTTGTAGTCTTAACCT 1027
Query 984 GACGAAATCATTTGAGAGGGCTGCTGCCTCTATGGCACGTGCTATTATCATACTACCAAC 1043
|||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||
Sbjct 1028 GACGAAATCATTTGAGAGGGCTGCCGCCTCTATGGCGCGTGCCATTATTATACTACCAAC 1087
Query 1044 GAAAGGTGATAGGTATGAAGTTGATACAGACGCATTTCTTTCTGTATTAGCCCTTCAACC 1103
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1088 GAAAGGTGATCGGTATGAAGTTGATACAGACGCATTTCTTTCTGTATTGGCCCTTCAACC 1147
Query 1104 TATACAAAAGATGGAATCGATCCCAACCATTGTAGAGGTTTCAAGCCCTAATACGTATGA 1163
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||
Sbjct 1148 TATACAAAAGATGGAATCGATCCCAACCATAGTAGAGGTATCAAGTCCTAATACGTACGA 1207
Query 1164 TCTTCTCAAGTCTATTTCGGGATTGAAAGTGGAGCCGGTTGAAAATGTTACGTCGAAATT 1223
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1208 TCTTCTCAAGTCCATTTCGGGATTGAAAGTGGAGCCGGTTGAAAATGTTACGTCCAAATT 1267
Query 1224 GTTTGTCCAATGCTCACGTCAAAAAGACCTGATAAAGATCTACAGGCACCTACTAAATTA 1283
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1268 GTTTGTCCAATGCTCACGTCAAAAAGACCTTATAAAGATCTACAGGCACCTACTAAATTA 1327
Query 1284 CTCAAAAAATGTATTTAATCTTTGCAGCTTCCCCAATCTAGCTGGGACGAAGTATAGACA 1343
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 1328 CTCAAAAAATGTATTTAATCTTTGCAGCTTCCCCAATCTAGTTGGGACAAAGTATAGACA 1387
Query 1344 ATTAAGACTGGGGTTCCAGGAGGTTGTGGTCTGTGGCCTTTTACGAGATGGGAAAGTAAA 1403
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1388 ACTAAGACTGGGGTTCCAGGAGGTTGTGGTCTGTGGCCTTTTACGAGATGGGAAAGTAAA 1447
Query 1404 TTTCCACCCAAATGATAACGAAGAGCTCATGGAAACCGACAAACTATTGTTTATCGCACC 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1448 TTTCCACCCAAATGATAACGAAGAGCTCATGGAAACCGACAAACTATTGTTTATCGCACC 1507
Query 1464 TCTCAATTGGAAAAAGAAGCAACTATTATATACAGACATCAAACTTGAGAACATTACAGT 1523
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1508 TCTCAATTGGAAAAAGAAGCAACTATTATATACAGACATGAAACTTGAGAACATTACAGT 1567
Query 1524 TGCGACTGATACTCGGAAGCAAGTGTTTGAGaaaaaaaGATCACGGCTAGCAAAAATTAC 1583
||||||||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct 1568 ACCGACTGATACTCGGAAGCAAGTGTTTGAGAAAAAAAGATCACGGCTATCGAAGATTAT 1627
Query 1584 AGTGCGTCCTCGTAAGTCCTTATCAAAGGGATCAGATTCCATCAAAGGACCCACAGAATC 1643
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1628 AATGCGTCCTCGTAAGTCCTTATCAAAGGGATCAGATTCCGTCAAAGGACCCACAGAATC 1687
Query 1644 TATACTTTTACTTGGTTGGCGTGGAGACGTTGTGCAAATGATCGAGGAGTTTGATAACTA 1703
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1688 TATACTTTTACTTGGTTGGCGTGGAGACGTTGTGCAAATGATTGAGGAGTTTGATAACTA 1747
Query 1704 TCTTGGTCCAGGCAGTTCAATGGAAATATTATCGGATGTACCGTTAGAGGACAGAAGAAG 1763
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1748 TCTTGGTCCAGGCAGTTCAATGGAAATATTATCGGATGTATCGTTAGAGGACAGAAGAAG 1807
Query 1764 AGTGGGTGATAGTATGGGTTCAGTGAAAATCAAGAACATCCAAGTTTCACATAAGGTTGG 1823
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1808 GGTGGGTGATAGTATAGGTTCAGTTAAAATCAAGAACATCCAAGTTTCACATAAGGTTGG 1867
Query 1824 GAATCCTCTGAATTATGATACATTAAAGCAAACTATAATGCGTATGAAAAATAAATATAG 1883
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1868 GAATCCTCTGAATTATGATACATTAAAGCAAACTATAATGCGTATGAAAAGTAAATATAG 1927
Query 1884 AAAAGGCAAAAATATTCCTTTGACCATCCTTGTCATATCGGATCGAGACTGGCTTCTTGG 1943
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1928 AAAAGGCAAAAATATTCCTTTGACCATCCTTGTCATATCGGATCGTGACTGGCTTCTAGG 1987
Query 1944 AGATCCATCTAGAGCAGACAAACAATCCGCTTACTCTCTTCTACTCGCTGAAAGCATCTG 2003
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1988 AGATCCATCTAGAGCAGACAAACAATCCGCTTACTCTCTTCTCCTCGCTGAAAGCATCTG 2047
Query 2004 CAACAAGCTTGGAGTAAAGGTACATAATCTAGCCTCTGAAATCGTTGACTCAAAACTCGG 2063
|||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 2048 CAACAAGCTTGGAGTAAAAGTGCATAATCTAGCCTCTGAAATCGTCGACTCAAAACTCGG 2107
Query 2064 CAAGCAGATAACAGGACTCAAGCCGTCCTTAACTTTCATAGCAGCAGAGGAAGTTATGAG 2123
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2108 CAAGCAGATAACAGGACTCAAGCCGTCCCTAACTTTCATAGCAGCAGAGGAAGTTATGAG 2167
Query 2124 CCTTGTAACAGCACAAGTTGCTGAAAATTGCGAACTGAACGAGGTATGGAAGGACATTCT 2183
|| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 2168 TCTCGTAACAGCACAAGTTGCTGAAAACAGCGAACTGAACGAGGTGTGGAAGGACATTCT 2227
Query 2184 AGACGCAGATGGTGACGAGATATACGTTAAGGACATTGAACTGTACATGAAAGAGGGCGA 2243
||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| ||
Sbjct 2228 AGACGCAGATGGTGATGAGATATACGTAAAGGACGTTGAACTGTACATGAAAGAGGGGGA 2287
Query 2244 GAACCCTTCATTCACTGAGCTCTCAGAGCGAGCTTGGCTAAGGAGAGAAGTCGCCATAGG 2303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2288 GAACCCTTCATTCACTGAGCTCTCAGAGCGAGCTTGGCTAAGGAGAGAAGTCGCCATAGG 2347
Query 2304 CTACATAAAAGGCGGTAAAAAGATAATCAATCCGGTTCCAAAGAACGAACCTCTCTCCCT 2363
|||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 2348 CTACATTAAAGGCGGTAAAAAGATGATCAATCCGGTTCCAAAGAATGAACCTCTCTCCCT 2407
Query 2364 CGAAATGGAAGACTCATTGATTGTTATATCAGAGCTTGAAGGAGACCAACCCATCACACT 2423
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2408 CGAAATGGATGACTCATTGATTGTTATATCAGAGCTTGAAGGAGACCAACCAATCACACT 2467
Query 2424 ATGA 2427
||||
Sbjct 2468 ATGA 2471
> AT5G02940.1 | Symbols: | Protein of unknown function (DUF1012)
| chr5:684474-689702 REVERSE LENGTH=2667
Length=2667
Score = 2772 bits (1501), Expect = 0.0
Identities = 2178/2489 (88%), Gaps = 109/2489 (4%)
Strand=Plus/Plus
Query 1 ATGGTGGCTGTTCAGTTATTTACCTGGAAGCCATTGATTCT-CCCT-TC-A-C---G--- 50
||||||||||||||||| ||||||||||||||||||||||| || | || | | |
Sbjct 29 ATGGTGGCTGTTCAGTTGTTTACCTGGAAGCCATTGATTCTACCTTCTCAAGCTTTGACA 88
Query 51 AGTAGATCGATTCGCGTCTTTTAACAGGAGCTTGAGTTTAAAGTCTCTACCTTTAGGTGG 110
|| ||||||||| || |||||| ||||||||||||||||| | ||||| |||||||||||
Sbjct 89 AG-AGATCGATTAGCTTCTTTTCACAGGAGCTTGAGTTTACACTCTCTGCCTTTAGGTGG 147
Query 111 GATTGAGTCTTTTAGATGCCCAGGGACCTTCAAAGTCAAATCTCAGAGGACAGGAGACAC 170
|||| |||||| ||| | | |||||||||||||||||||||||| ||||||||||| ||
Sbjct 148 GATTAAGTCTTCTAGTTTCAGAGGGACCTTCAAAGTCAAATCTCAAAGGACAGGAGATAC 207
Query 171 AGAGCCGCCTAGTGTTAACCTGAATGATTTTAATTCCAAATTCCATAAGAGTCTTCCATA 230
||||||||||| | ||| | || ||||| |||||||||||| ||||||||||||||||
Sbjct 208 AGAGCCGCCTAATAAAAACTTCAAAGATTTAAATTCCAAATTCTATAAGAGTCTTCCATA 267
Query 231 TAAACTGGTGGTAGGATGCATCCCACTGTATGTGGTGTTCAGGATAGCGCAAAAGATATG 290
|||||| ||| ||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct 268 TAAACTTGTGATAGGATGCATCCCACTGTATGCGGTGTTGAGAATAGCGCAAAAGATATT 327
Query 291 TCAAGAGCTTCC-CCTCCTCGTTCAGAACTCAGTGGGGGCTGGCTTGCCTTTTGCTTGTG 349
|||||||||||| | ||| ||||||| |||||| |||||||||||||||||| ||||
Sbjct 328 TCAAGAGCTTCCAAAT-CTCATTCAGAATTCAGTGAAGGCTGGCTTGCCTTTTGCATGTG 386
Query 350 CATCGAACTCTCT--ACCTAC-TCCTCTCAAGTTGGACGTCTCCGTTCCTTCTTTTCAAG 406
|||| ||| || | || || |||| | | | | | || ||||||||| || |
Sbjct 387 CATCAAACGCTATAGACAAACATCCT-T-TA-CT-CAAG--GCCATTCCTTCTTCCCATG 440
Query 407 ATATCAGATGGGGTCTTGCAAGGT-TTCTTTACCTGTTCAATATTCAGCTTGAGAAGAAC 465
|||||| ||||||||||||||||| ||| |||||| ||||||| ||||||||||||||||
Sbjct 441 ATATCAAATGGGGTCTTGCAAGGTCTTC-TTACCTCTTCAATACTCAGCTTGAGAAGAAC 499
Query 466 ATTGGCACGTTCCTTGTGGCGCTCATGATAGCATG-TGTATCGTTTGTTATCATTGGGGG 524
|||||||| | |||||| |||| ||||| |||| | | ||||||||||||||||| ||
Sbjct 500 CTTGGCACGGTATTTGTGGTGCTCCTGATAACATGCT-TTTCGTTTGTTATCATTGGAGG 558
Query 525 ACTC--CTATTTTCAAATTCA-GACCTAC-CA---TTAGAAGACTGCCTTTGGGAAGCCT 577
|||| || |||||||||||| || || || |||||||||||||| ||||| ||||
Sbjct 559 ACTCTTCT-TTTTCAAATTCAGGAAAGACACATCCTTAGAAGACTGCCTCTGGGAGGCCT 617
Query 578 GGGCATGCCTC-ATATCCTCTTCTACTCATCTGAAGCAAAAGACACGCATAGAAAGAGTC 636
||||||||||| || | || |||||||||| |||||||||||||| | |||||| ||
Sbjct 618 GGGCATGCCTCGTTA-ACGCTGATACTCATCTGGAGCAAAAGACACGCTTCGAAAGACTC 676
Query 637 ATTGGATTTGTCCTAGCCATTTGGGGAATATTGTTTTACTCTCGGCTTTTAAGCACAATG 696
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 677 ATTGGATTTGTCCTAGCCATTTGGGGAATAGTGTTTTACTCTCGGCTTTTAAGCACAATG 736
Query 697 ACAGAACAATTTCGGTATAATATGACAAAACTGAGGGAAGGGGCACAGATGCAAGTCCTA 756
||||| |||||||||||| |||||| |||| |||||||||||||||| ||||||||||||
Sbjct 737 ACAGAGCAATTTCGGTATCATATGAAAAAAGTGAGGGAAGGGGCACATATGCAAGTCCTA 796
Query 757 GAAGCTGATCATATCATCATTTGTGGAATAAACAGTCATCTACCTTTCATACTAAAGCAA 816
||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 797 GAATCTGACCATATCATCATTTGTGGAATAAACAGTCATCTGCCTTTCATACTAAAGCAA 856
Query 817 CTGAACAGCTACCATGAGCATGCTGTCCGC-T---T--------AG---GGAAGCAGAGA 861
|| ||||| || || |||||||||||||| | | || ||||||||| |
Sbjct 857 CTCAACAGTTATCAACAGCATGCTGTCCGCTTAGGTACCACCACAGCTAGGAAGCAGACA 916
Query 862 CTTCTGCTCATGTCTGATACTCCAAGG-AAGCAGATGGACAAGCTAGCTGAGGCGTACTC 920
||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
Sbjct 917 CTTCTGCTCATGTCTGATACTCCAAGGAAAG-AGATGGACAAGCTAGCTGAGGCGTACGC 975
Query 921 CAGAGA-TTTAATCATA-TTGATATCCTTACACAGAGGTAAACTGTGCAGTTGTAGTCTT 978
|| ||| ||| |||| | |||| |||||| || ||| | ||||||||||||
Sbjct 976 CAAAGATTTTGATCA-ACTTGACATCCTT--AC------AAA----G-AGTTGTAGTCTT 1021
Query 979 AACATGACGAAATCATTTGAGAGGGCTGCTGCCTCTATGGCACGTGCTATTATCATACTA 1038
|||||||| ||||| ||||| |||||||| |||| |||||| || || ||||||||||||
Sbjct 1022 AACATGACAAAATCGTTTGAAAGGGCTGCCGCCTGTATGGCGCGCGCCATTATCATACTA 1081
Query 1039 CCAACGAAAGGTGATAGGTATGAAGTTGATACAGACGCATTTCTTTCTGTATTAGCCCTT 1098
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1082 CCAACGAAAGGTGATCGGTATGAAGTTGATACAGACGCATTTCTTTCTGTATTGGCCCTT 1141
Query 1099 CAACCTATACAAAAGATGGAATCGATCCCAACCATTGTAGAGGTTTCAAGCCCTAATACG 1158
|||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |
Sbjct 1142 GAACCTATACAAAAGATGGAATCCATCCCAACCATTGTAGAGGTATCAAGCTCTAATATG 1201
Query 1159 TATGATCTTCTCAAGTCTATTTCGGGATTGAAAGTGGAGCCGGTTGAAAATGT-TACGTC 1217
||||||||||||||||| || ||||| |||||||||||||||||||||||| | ||| ||
Sbjct 1202 TATGATCTTCTCAAGTCCATATCGGGGTTGAAAGTGGAGCCGGTTGAAAAT-TCTACATC 1260
Query 1218 GAAATTGTTTGTCCAATGCTCACGTCAAAAAGACCTGATAAAGATCTACAGGCACCTACT 1277
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1261 CAAATTGTTTGTCCAATGCTCACGTCAAAAGGACCTGATAAAGATCTACAGGCACCTACT 1320
Query 1278 AAATTACTCAAAAAATGTATTTAATCTTTGCAGCTTCCCCAATCTAGCTGGGACGAAGTA 1337
|||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||
Sbjct 1321 AAATTACTCAAAAAATGTATTTAACCTTTGCAGCTTCCCCAATCTAACTGGGATGAAGTA 1380
Query 1338 TAGACAATTAAGACTGGGGTTCCAGGAGGTTGTGGTCTGTGGCCTTTTACGAGATGGGAA 1397
|||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1381 TAGACAGTTAAGACTGGGGTTCCAGGAGGTTGTGGTCTGTGGGATTTTAAGAGATGGGAA 1440
Query 1398 AGTAAATTTCCACCCAAATGATAACGAAGAGCTCATGGAAACCGACAAACTATTGTTTAT 1457
|||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||
Sbjct 1441 AGTAAATTTCCATCCAAATGATGATGAAGAGCTCATGGAAACTGACAAACTATTGTTTAT 1500
Query 1458 CGCACCTCTCAATTGGAAAAAGAAGCAAC-TATTATATACAGACAT-CAAACTTGAGAAC 1515
||||||||||| | ||| | || | |||||||||||||| |||| |||||||
Sbjct 1501 TGCACCTCTCAA---G---AAG--G--ACTTTTTATATACAGACATGAAAAC-TGAGAAC 1549
Query 1516 ATTACAGT---TGCGAC---TGATACTCGGAAGCAAGTGTTTGA-GaaaaaaaGATCACG 1568
|| ||||| || ||| |||||||||||||||||||| ||| |||||||| ||||||
Sbjct 1550 ATGACAGTAGATGAGACTGATGATACTCGGAAGCAAGTGTATGAGGAAAAAAA-ATCACG 1608
Query 1569 GCTAGCAAAA-ATTACAGTGCGTCCTCGTAAGTCCTTATCAAAGGGATCAGATTCCATCA 1627
||||| |||| |||| | ||||||| |||||||||||||||||||||||||||| |||
Sbjct 1609 GCTAG-AAAAGATTATAACGCGTCCTAGTAAGTCCTTATCAAAGGGATCAGATTCTTTCA 1667
Query 1628 AAGGACCCACAGAATCTATACTTTTACTTGGTTGGCGTGGAGACGTTGTGCAA-ATGATC 1686
||||||||| ||||||||||||||| ||||||||||||||||| |||||| || ||||||
Sbjct 1668 AAGGACCCAAAGAATCTATACTTTTGCTTGGTTGGCGTGGAGATGTTGTG-AATATGATC 1726
Query 1687 GAGGAGTTTGATAACTATCTTGGTCCAGGCAGTTCAATGGAAATATTATCGGATGTACCG 1746
|||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1727 AAGGAGTTTGATAGTTATCTTGGTCCAGGCAGTTCATTGGAAATATTATCAGATGTACCG 1786
Query 1747 TTAGAGGACAGAAGAAGAGTGGGTGATAGTATGGGTTCAGTG-AAAATCAAGAACATCCA 1805
||||||||||||||| |||||| | ||||| | | ||| | |||||||||||||||||
Sbjct 1787 TTAGAGGACAGAAGAGGAGTGGACCAGAGTATAGCTACAG-GAAAAATCAAGAACATCCA 1845
Query 1806 AGTTTCACATAAG-GTTGGGAATCCTCTGAATTATGATACATTAAAGCAAACTATAATGC 1864
|||||||||| || |||||||||| | || ||||||||||||||||| ||| ||||||||
Sbjct 1846 AGTTTCACAT-AGCGTTGGGAATCATATGGATTATGATACATTAAAGGAAAGTATAATGC 1904
Query 1865 GTATGAAAAATAAATATAG-AAAAGG-CAA-AA-ATATTCCTTTGACCATCCTTGTCATA 1920
||| ||||||||||| | |||||| || || |||||| | |||| ||| |||| |||
Sbjct 1905 ACATGCAAAATAAATAT-GAAAAAGGTGAAGAAGATATTCGTCTGACTATCGTTGTAATA 1963
Query 1921 TCGGATCGAGACTGGCTTCTTGGAGATCCATCTAGAGCAGACAAACAATCCGCTTACT-C 1979
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct 1964 TCGGATCGAGACTTGCTTCTTGGAGATCCATCTAGAGCAGACAAACAATCTGCTTA-TAC 2022
Query 1980 TCTTCTACTCGCTGAAAGCATCTGCAACAAGCTTGGAGTAAAGGTACATAATCTAGCCTC 2039
|||||| || ||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2023 TCTTCTCCTTGCTGAAACCATCTGCAACAAGCTTGGAGTTAAGGTACATAATCTAGCCTC 2082
Query 2040 TGAAATCGTTGACTCAAAACTCGGCAAGCAGATAACAGGACTCAAGCCGTCCTTAACTTT 2099
|||||| || ||| ||||||||||||||||||||||| |||||||||||||||| || ||
Sbjct 2083 TGAAATTGTCGACACAAAACTCGGCAAGCAGATAACAAGACTCAAGCCGTCCTTGACATT 2142
Query 2100 CATAGCAGCAGAGGAAGTTATGAGCCTTGTAACAGCACAAGTTGCTGAAAATTGCGAACT 2159
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 2143 CATAGCAGCAGAGGAAGTTATGAGTCTTGTAACAGCACAAGTTGCTGAAAACAGCGAACT 2202
Query 2160 GAACGAGGTATGGAAGGACATTCTAGACGCAGATGGTGACGAGATATACGTTAAGGACAT 2219
||||||||||||||||||||| | || ||||| ||||| ||||||||||| ||||||||
Sbjct 2203 AAACGAGGTATGGAAGGACATTTTGGATGCAGAGGGTGATGAGATATACGTAAAGGACAT 2262
Query 2220 TGAACTGTACATGAAAGAGGGCGAGAACCCTTCATTCACTGAGCTCTCAGAGCGAGCTTG 2279
||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 2263 TGAACTGTATATGAAAGAGGGCGAGAACCCTTCATTCACGGAGCTTTCAGAGCGAGCTTG 2322
Query 2280 GCTAAGGAGAGAAGTCGCCATAGGCTACATAAAAGGCGGTAAAAAGATAATCAATCCGGT 2339
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2323 GCTAAGGAGAGAAGTTGCCATAGGCTACATAAAAGGCGGTAAAAAGATAATCAATCCGGT 2382
Query 2340 TCCAAAGAAC-GAACCTCTCTCCCTCGAAATGGAAGACTCATTGATTGTTATATCAGAGC 2398
||||||| || |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 2383 TCCAAAG-ACAGAACCTGTTTCCCTCGAAATGGAAGACTCATTGATTGTTATATCAGAGC 2441
Query 2399 TTGAAGGAGACCAACCCATCACACTATGA 2427
|||||||||||||| ||||||||||||
Sbjct 2442 TTGAAGGAGACCAAGTTATCACACTATGA 2470
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 120531508545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5