BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg333544 Length=1584 Score E Sequences producing significant alignments: (Bits) Value AT1G01110.2 | Symbols: IQD18 | IQ-domain 18 | chr1:52239-54692 ... 2477 0.0 AT4G00820.1 | Symbols: iqd17 | IQ-domain 17 | chr4:349116-35155... 617 8e-176 AT4G14750.1 | Symbols: IQD19 | IQ-domain 19 | chr4:8470381-8472... 91.6 2e-17 > AT1G01110.2 | Symbols: IQD18 | IQ-domain 18 | chr1:52239-54692 FORWARD LENGTH=1782 Length=1782 Score = 2477 bits (1341), Expect = 0.0 Identities = 1509/1590 (95%), Gaps = 12/1590 (1%) Strand=Plus/Plus Query 1 ATGGGGAAAAAGAACGGCTCTTCTTCTTGGCTTACCGTCGTG-AAA-CGAGCTTTCCGAT 58 |||||||||||||||||||||||||||||||| |||| | || ||| ||||||||||||| Sbjct 1 ATGGGGAAAAAGAACGGCTCTTCTTCTTGGCTCACCG-C-TGTAAAGCGAGCTTTCCGAT 58 Query 59 CTCCGACCAAGAAAGATCATAATAACGACGTCgaagaagatgaggaaaagaagagagaga 118 ||||||| ||||||||||||| ||| ||||||||||||||||| |||||||||||||||| Sbjct 59 CTCCGACGAAGAAAGATCATAGTAATGACGTCGAAGAAGATGAAGAAAAGAAGAGAGAGA 118 Query 119 agagaCGGTGGTTTAGAAAACCGGCGACTCAAGAATCTCCGGTGAAGTCTTCCGGTATCT 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 AGAGACGGTGGTTTAGAAAACCGGCGACTCAAGAATCTCCGGTGAAGTCTTCCGGTATCT 178 Query 179 CTCCGCC-GCCACCACCTCAAGAATCAGTTAACGCAAACTCACAAA-CTTCTCCGGAGAC 236 |||| || | |||| | |||| ||| |||||| ||||||| ||| | ||||||||||| Sbjct 179 CTCCACCAG-CACCTCAGGAAGATTCACTTAACGTAAACTCA-AAACCCTCTCCGGAGAC 236 Query 237 AGCACCGAGTTACGCAACGACGACGCCGTTATCGAACGCCGG-AAACCCTCCGTCCGCCG 295 |||||||||||||||||| ||||||||| ||| |||||||| |||||| |||||||||| Sbjct 237 AGCACCGAGTTACGCAACTACGACGCCGCCATCCAACGCCGGTAAACCC-CCGTCCGCCG 295 Query 296 TCGTCCCCATCGCCACGTCAGCATCTAAGACACTCGCACCGAGAAGGATTTATTACGCAA 355 | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 296 TAGTCCCCATCGCCACGTCAGCATCTAAGACACTCGCACCGAGGCGGATTTATTACGCAA 355 Query 356 GAGAAAATTACGCTGCTGTTGTTATCCAGACTTCTTTCAGAGGATATTTGGCAAGAAGAG 415 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 356 GAGAAAATTACGCTGCTGTTGTCATCCAGACTTCTTTCAGAGGATATTTGGCAAGAAGAG 415 Query 416 CATTAAGAGCATTAAAAGGGTTAGTGAAGCTACAAGCATTGGTGAGGGGTCATAATGTGA 475 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 416 CATTAAGAGCATTAAAAGGGTTAGTGAAGCTACAAGCATTGGTGAGGGGACATAATGTGA 475 Query 476 GAAAACAAGCCAAAATGACATTAAGGTGTATGCAAGCTCTGGTTCGAGTCCAGTCTCGTG 535 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 GAAAGCAAGCTAAAATGACATTAAGGTGTATGCAAGCTCTGGTTCGAGTCCAGTCTCGTG 535 Query 536 TGCTTGACCAACGCAAACGCTTGTCTCATGACGGTAGTCGCAAATCCGCGTTCAGCGACT 595 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 536 TGCTTGACCAACGCAAACGCTTGTCTCATGACGGTAGTCGCAAATCCGCGTTCAGTGACT 595 Query 596 CTCACGCTGTTTATGAATCTCGATATCTTCAAGAGATATCAGATCGACAATCCATGTCAA 655 |||||||||||| ||||||||| ||||||||||| | |||||||||||||||||||||| Sbjct 596 CTCACGCTGTTTTTGAATCTCGCTATCTTCAAGATTTGTCAGATCGACAATCCATGTCAA 655 Query 656 GAGAAGGAAGCAGCGCCGCGGAAGATTGGGATGACCGACCACACACGATAGACGAAGTGA 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 656 GAGAAGGAAGCAGCGCCGCGGAAGATTGGGATGACCGACCACACACGATAGACGCAGTGA 715 Query 716 AAGCGATGCTACAACGGAGACGGGACACAGCATTGAGACATGAGAAGACTAATTTGTCTC 775 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 716 AAGTGATGCTACAACGGAGACGGGACACAGCATTGAGACATGACAAGACTAATTTGTCAC 775 Query 776 AAGCTTTCTCTCAACATATGTGGAGAACGGTTCGTAACCAATCCGTGGGAGGAGACCACG 835 |||||||||||||| | |||||||| |||||| ||||||||||| || |||| |||||| Sbjct 776 AAGCTTTCTCTCAAAAGATGTGGAGGACGGTTGGTAACCAATCCACGGAAGGACACCACG 835 Query 836 AGGTGGAACTTGAGGAGGAAAGACCAAAATGGCTTGACCGGTGGATGGCTACTAGACCGT 895 |||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 836 AGGTAGAACTTGAAGAGGAAAGGCCAAAATGGCTTGACCGGTGGATGGCTACTAGACCGT 895 Query 896 GGGATAAACGAGCTAGTAGTAGAGCTTCGGTTGACCAAAGGATTTCAGTTAAAACCGTTG 955 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 896 GGGATAAACGAGCTAGTAGTAGAGCTTCGGTTGACCAAAGGGTTTCAGTTAAAACCGTTG 955 Query 956 AAATCGACACTTCTCAGCCTTACTCAAGAACAAGAACAGGAAGCCCGAGTCGTAGCCAAA 1015 |||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct 956 AAATCGACACTTCTCAGCCTTACTCAAGAACAGGAGCAGGAAGCCCGAGTCGTGGCCAAA 1015 Query 1016 GACCTAGTTCCCCATCAAGAACTAGCCACCATTACCAATCCCGCAATAATTTCTCAGCCA 1075 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 GACCTAGTTCCCCATCAAGAACTAGCCACCATTACCAATCCCGCAATAATTTCTCAGCCA 1075 Query 1076 CTCCATCTCCGGCTCAGTCTAGACCAATACATATTCGGTCAGCTAGTCCACGGTGCCAGA 1135 |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1076 CTCCATCTCCGGCTAAGTCTAGACCAATACTTATTCGGTCAGCTAGTCCACGGTGCCAGA 1135 Query 1136 GAGACCCGAGGGAAGACCGGGACCGAGTAGCTTATAGTTACACATCAAACACACCAAGCT 1195 ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||| Sbjct 1136 GAGACCCGAGGGAAGACCGTGACCGAGCAGCTTATAGTTATACATCAAACACACCAAGCT 1195 Query 1196 TGAGATCTAACTATAGTTTCACAGCTAGGAGTGGATGTAGCATTAGTACCACAATGGTTA 1255 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1196 TGAGATCCAATTATAGTTTCACAGCTAGGAGTGGATGTAGCATTAGTACCACAATGGTTA 1255 Query 1256 ATAATGCATCATTGTTGCCTAATTACATGGCTAGTACGGAGTCGGCTAAGGCGAGGATCC 1315 ||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||| Sbjct 1256 ATAATGCATCATTGTTGCCTAATTACATGGCGAGTACAGAGTCAGCTAAAGCGAGGATCC 1315 Query 1316 GGTCTCAGAGCGCACCGAGGCAACGAG-CCTCAACTCCCGAGAGGGACCGTGCGGGTTTG 1374 ||||||| || |||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 1316 GGTCTCATAGTGCACCGAGGCAACG-GCCCTCAACTCCCGAGAGGGACCGTGCGGGTTTG 1374 Query 1375 GTCAAGAAACGGCTCTCGTACCCTGTACCCCCGCCAGCGGAATATGAGGACAATAATAGC 1434 |||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct 1375 GTCAAGAAACGGCTCTCGTATCCGGTACCACCGCCAGCGGAGTATGAGGACAATAATAGC 1434 Query 1435 TTAAGGAGTCCAAGCTTTAAGAGTGTGGCTGGTTCACATTTTGGTGGAATGTTAGAGCAG 1494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1435 TTAAGGAGTCCAAGCTTTAAGAGTGTGGCTGGTTCACATTTTGGTGGAATGTTAGAGCAG 1494 Query 1495 CAATCGAATTACTCTTCATGTTGCACTGAGTCTAATGGTATTGAGATCTCTCCAGCTTCT 1554 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct 1495 CAATCGAATTACTCTTCATGTTGCACTGAGTCTAACGGTGTTGAGATCTCTCCAGCTTCT 1554 Query 1555 ACTAGTGACTTTAGGAATTGGCTTAGATGA 1584 |||||||||||||||||||||||||||||| Sbjct 1555 ACTAGTGACTTTAGGAATTGGCTTAGATGA 1584 > AT4G00820.1 | Symbols: iqd17 | IQ-domain 17 | chr4:349116-351550 FORWARD LENGTH=2032 Length=2032 Score = 617 bits (334), Expect = 8e-176 Identities = 948/1226 (77%), Gaps = 116/1226 (9%) Strand=Plus/Plus Query 351 CGCAAGAGAAAATTACGCTGCTGTTGTTATCCAGACTTCTTTCAGAGGATATTTGGCAAG 410 |||||||||| ||||||| |||||||| ||||| ||| ||||||||| ||||||||||| Sbjct 568 CGCAAGAGAAGATTACGCAGCTGTTGTAATCCAAACTGGTTTCAGAGGCTATTTGGCAAG 627 Query 411 AAGAGCATTAAGAGCATTAAAAGGGTTAGTGAAGCTACAAGCATTGGTGAGGGGTCATAA 470 |||||||||||||||||| |||||| |||||||| |||||||| | ||||| ||||| || Sbjct 628 AAGAGCATTAAGAGCATTGAAAGGGCTAGTGAAGTTACAAGCACTAGTGAGAGGTCACAA 687 Query 471 TGTGAGAAAACAAGCCAAA-ATGACATTAAGGTGTATGCAAGCTCTGGTTCGAGTCCAGT 529 |||||| || ||||| ||| ||||| |||||||||||||||||||| ||||||||||| | Sbjct 688 TGTGAGGAAGCAAGC-AAAGATGACTTTAAGGTGTATGCAAGCTCTAGTTCGAGTCCAAT 746 Query 530 CTCGTGTGCTTGACCAACGCAAACGCTTGTCTCATGACGGTAGTCGCAAATCCGCGTTCA 589 ||||||||||||||||||| |||||||||||||| || |||||||||||||| || |||| Sbjct 747 CTCGTGTGCTTGACCAACGGAAACGCTTGTCTCACGATGGTAGTCGCAAATCTGCCTTCA 806 Query 590 GCGACTCTCAC-GCTGTT-TATGAATCTCGATATCTTCAAGAGATATCAGATC-GACA-A 645 ||||| |||| | ||| | |||||||| ||||||||||| |||||||| | || | | Sbjct 807 GCGACACTCAAAG-TGTGCTC-GAATCTCGTTATCTTCAAGAAATATCAGA-CAGA-AGA 862 Query 646 TCCATGTCAAGAGAAGGAAGCAGCGCCGCGGAAGATTGGGATGACCGACCACACACGATA 705 |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||| Sbjct 863 TCCATGTCAAGAGAAGGAAGTAGCATTGCGGAAGATTGGGATGATCGACCACACACGATT 922 Query 706 GACGAAGTGAAAGCGATGCTACAACGGAGACGGGACACA-GCATTGAGACATGAGAAG-A 763 || ||||||||||| ||| | |||| ||||| |||| | || ||||||| ||||| | | Sbjct 923 GAGGAAGTGAAAGCAATGTTGCAACAAAGACGAGACA-ATGCGTTGAGACGTGAGA-GTA 980 Query 764 -CTAAT--T-TGTCTCAAGCTTTCTCTCAACATATGT-GGAGAACG-GTTCGTAACCAAT 817 | ||| | | || |||||||||||||| || | | ||||||| | ||| | | Sbjct 981 AC-AATAGTATATCACAAGCTTTCTCTCACCAGGT-TCGGAGAACAAGAG-GTAGTTATT 1037 Query 818 CCGTGGGAGGAGACCACGAGGTGGAACTTGAGGAGGAAAGACCAAAATGGCTT-GACCGG 876 | | ||||||| ||| | | | || || || ||||| |||||| || ||| | Sbjct 1038 C--TAC-AGGAGAC---GAG-T--A--T-GAAGAAGAGAGACCGAAATGG-TTAGACAGA 1084 Query 877 TGGATGGCTACTAGACCGTGGGATAAACGAGCTAGTA-GTAGAGCTTCG-GTTGACCAAA 934 ||||||||| ||| ||||||||||||||||||| | | || | | || |||| Sbjct 1085 TGGATGGCTTCTAAACCGTGGGATAAACGAGCTTCAACG--GATCAAAGAGT--ACCACC 1140 Query 935 GGATTTCAGTTAAAACCGTTGAAATCGACACTTCTCAGCCTTACTCAA---G----AACA 987 || ||| | |||||||| || ||||| |||||||| || || | || | ||| Sbjct 1141 GG-TTT-AC--AAAACCGTGGAGATCGATACTTCTCAACCGTATTTAACCCGCGGTAACT 1196 Query 988 --AGAACAGG---AAGCCCGAGTCGTAGCCAAAGACCTAGTTCCCCATCAAGAACTAGCC 1042 ||||| || ||| || || ||||||||||| |||||||| |||||||| || |||| Sbjct 1197 CGAGAACCGGTGCAAGTCCAAGCCGTAGCCAAAGGCCTAGTTCACCATCAAGGACCAGCC 1256 Query 1043 ACCATTACCAATCC-CGCAATAATT-TC-TCAGCCACTCCATCTCCGGCTCAGTCTAGAC 1099 ||||||||||| | | |||| || || ||||| || |||||||||||| | ||||||| Sbjct 1257 ACCATTACCAA-CAACACAAT--TTCTCATCAGCTACACCATCTCCGGCTAAATCTAGAC 1313 Query 1100 CAATACATATTCGGTCAGCTAGTCCACGG-TGCCAGAGAGACCCGAGGGAAGACCGGGAC 1158 | ||||| ||||| || |||||||| ||| | ||| | ||| || | | | || | Sbjct 1314 CGATACAAATTCGATCCGCTAGTCCGCGGAT-CCA-A-AGA---GATG-AT--C-GGT-C 1362 Query 1159 CGAGTAGCTTATAGTTACACATCAAACACACCAAGCTTGAGATCTAACTATAGTTTCACA 1218 | ||| | | | | |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1363 AGCGTA-C--A-ACT-ACACATCAAACACACCTAGCTTGAGATCTAACTATAGTTTCACA 1417 Query 1219 GCTAGGAGTGGATGTAGCATTAGTACCAC-A--A-TGGT--TA-ATAATGCAT-CATTGT 1270 || || ||||| | ||| || ||||||| | | | | || | ||||| | ||||| Sbjct 1418 GCAAGAAGTGGTTATAGTGTTTGTACCACTACTACTACTGCTACA-AATGC-TGCATTG- 1474 Query 1271 TGCCTAATTACATGGCTAGTACGGAGTCGGCTAAGGCGAGGATCCGGTCTCAGAGCGCAC 1330 || || |||||||| | |||||| || |||||||| || |||||||||||||| |||| Sbjct 1475 --CCAAACTACATGGCGATTACGGAATCTGCTAAGGCTAGAATCCGGTCTCAGAGTGCAC 1532 Query 1331 CGAGGCAACGAGCCT-CAACTCCCGAGAGGGACCGTG-CGGGTTTGGTCAAGAAA-CGGC 1387 | |||||||| |||| |||| ||||||| || ||| | | || | | ||||| |||| Sbjct 1533 CAAGGCAACG-GCCTTCAACACCCGAGAAAGAACGTATCAG-TTCAG-CTAGAAAACGGC 1589 Query 1388 TCTCGTACCCTGTACC-CC-C-GCCAGCGG-AATATGAGGACAATAATAGCTTAAGGAGT 1443 | |||| || || || || | ||| || | || ||| | | | | || ||||||||| Sbjct 1590 TTTCGTTTCCAGTTCCACCGCTGCC-GCAGCAA-ATG-G-ATGGTCAGAGTTTAAGGAGT 1645 Query 1444 CCAAGCTTT-AAGAGTGT-GGCTGGTTCACATTTTGGTGGAATGTTAGAGCAGCAATCGA 1501 ||||| ||| |||||| | || ||| ||||| || |||| | || | | || ||||| | Sbjct 1646 CCAAG-TTTCAAGAGTATAGG-TGGCTCACAATTGGGTGCATTGG-A-A-CAACAATCAA 1700 Query 1502 ATTACTCTTCATGTTGCACTGAGTCT 1527 |||||||||| ||||| ||||||||| Sbjct 1701 ATTACTCTTCTTGTTGTACTGAGTCT 1726 > AT4G14750.1 | Symbols: IQD19 | IQ-domain 19 | chr4:8470381-8472187 FORWARD LENGTH=1516 Length=1516 Score = 91.6 bits (49), Expect = 2e-17 Identities = 96/117 (82%), Gaps = 10/117 (9%) Strand=Plus/Plus Query 401 ATTTGGC-AAGAAGAGCATTAAGAGCATTAAAAGGGTTAGTGAAGCTACAAGCATTGGTG 459 ||||||| | ||| |||||||||||||||||||||||||||||| |||||||| | ||| Sbjct 421 ATTTGGCGAGGAA-AGCATTAAGAGCATTAAAAGGGTTAGTGAAATTACAAGCACTAGTG 479 Query 460 AGGGGTCATA-ATGTGAGAAAACAAGCCAAAA--TGACA-TTAAGGTGTATGCAAGC 512 || |||||| | || || |||||||| || | | ||| ||| | ||||||||||| Sbjct 480 AGAGGTCATTTA-GTAAGGAAACAAGC-AACAGCT-ACACTTA-GATGTATGCAAGC 532 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78212449110 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5