BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg335256
Length=2883
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20060.1 | Symbols: | ATP binding microtubule motor family ... 1628 0.0
> AT1G20060.1 | Symbols: | ATP binding microtubule motor family
protein | chr1:6950655-6956293 REVERSE LENGTH=2981
Length=2981
Score = 1628 bits (881), Expect = 0.0
Identities = 1021/1088 (94%), Gaps = 11/1088 (1%)
Strand=Plus/Plus
Query 1 ATGGAGGAGAAACAGAAAAGTCTCAGTCCTCCGCCGTGCCCTTCCACTGTAACAGTGCGA 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1 ATGGAGGAGAAACAGAAAAGTCTCAGTCCTCCGCCGTGTCCTTCCACTGTAACAGTGCGA 60
Query 61 CGGAATCCTTCGAGGAGAGCTAGAGCAACGCCGTATACAACTGCAACTAAGCCACCTTTC 120
||||||||| |||||||||||||||||||||||| ||| ||| |||||||||||||| ||
Sbjct 61 CGGAATCCTCCGAGGAGAGCTAGAGCAACGCCGTTTACTACTACAACTAAGCCACCTCTC 120
Query 121 TCCTCTTTAGCCTCCGCGATAA-CCCACGACGTTCCTACTTTTCCGATCGACGAGATTCT 179
||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 121 TCCTCTTTAGCCTGCGCGA-AACCCCACGACGTTCCTACTTTTCCGATCGACGAGATTCT 179
Query 180 CTCCATCCAAATCCCACAATCCGAACCAAAACAATCGATTCCAGAGAGTTTGAAGATTTT 239
||| |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct 180 CTCTATCCAAATCCCACAATCCGAACCAAAACCAGCGATTGCAGAGAGTTTGAAGATTTT 239
Query 240 CCTGAGAATCAAACCTTTGAAAAGC-TTCACAAAGGTT---ACCACAACGAAG-GCCAGA 294
||||||||||||||| |||| || | ||||| |||||| ||||| |||||| | ||||
Sbjct 240 CCTGAGAATCAAACCATTGAGAA-CTTTCACCAAGGTTACGACCACCACGAAGAG-CAGA 297
Query 295 CCTAGAAATGTGTGGCCACAGAAACCTTCgaagaagaacatcgcgaaagagaacaggaat 354
||||||||||||||||||||||| |||||||||||||||| |||||||||||| || |||
Sbjct 298 CCTAGAAATGTGTGGCCACAGAATCCTTCGAAGAAGAACAACGCGAAAGAGAATAGAAAT 357
Query 355 ccggagattacgaagaaggttaagaagaaggaagaagaagCTTGTATCACTCTCAACGAT 414
|||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct 358 CCGGAGATTACGAAGAAGGTTAGGAAGAAGGACGAAGAAGCTTGTATTACTCTCAACGAT 417
Query 415 CCTTATTCAGTCACATTAACTCCGCCTCAATCGTTGCAAGAGCTGAAACGAAGTAAGACT 474
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 TCTTATTCAGTTACGTTAACTCCGCCTCAATCGTTGCAAGAGCTGAAACGAAGTAAGACT 477
Query 475 GAAGTATACGAAGGGTTTTCTCATGTTTTCCCGGCGGATTGTTCTCAGAACGATGTGTAT 534
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 GAGGTATACGAAGGGTTTTCTCATGTTTTCCCGGCGGATTGTTCTCAGAACGATGTGTAT 537
Query 535 GATAAAATGGTTCAACCTTTGTTGGAGGATTTCATGAAAGGGAAAAGCGGAATGTTGGCG 594
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 538 GATAAAATGGTTCAACCTTTGTTGGAGGATTTCATGAAAGGGAAAAGTGGAATGTTGGCG 597
Query 595 GCATTGGGACCTAGCGGCTCGGGGAAGACTCATACGGTCTTTGGAACTTTGAAGGATCCT 654
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 598 GCGTTGGGACCTAGCGGCTCGGGGAAGACTCATACGGTCTTTGGAAGTTTGAAGGATCCT 657
Query 655 GGAATTGTGCCAATTACACTCCGTCAAATTTTCAAGAAGAGTC-ATGAGAGTTCTTCTGG 713
||||||||||||||||||||||||||||||||||| |||| | ||||||||| ||||||
Sbjct 658 GGAATTGTGCCAATTACACTCCGTCAAATTTTCAAAAAGAA-CGATGAGAGTTGTTCTGG 716
Query 714 ACCTTTGAGGTTATTTAACTTGTCCATATTTGAAATATGCTCTGAACGAGGGAAAGGGGA 773
| ||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 717 ATCTTTGAGGTCATTTAACTTGTCGATATTTGAAATATGTTCTGAACGAGGGAAAGGGGA 776
Query 774 GAAAGCTTATGATTTACTAGCTGGTGAAAGCTCTGAATTGTCTGTGCAGCAATCAACCAT 833
|||||| |||||||| |||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 777 GAAAGCATATGATTTGCTAGGTGGTGAAAGCTCTGAATTGTCTGTTCAGCAATCAACCAT 836
Query 834 CAGGGGTTTGAAAGAGGTCCCAATCCAGAATTTGGAGGAGGCAGAGTCTTTAATTGGACA 893
|||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||
Sbjct 837 CAGGGGTTTGAAAGAGGTTCCAATCCAGAATCTGGAAGAAGCAGAGTCTTTAATTGGACA 896
Query 894 AGCAATGCTGAAACGTGCGACAGCTACTACAAACTCAAATAGCCAGTCAAGTCGCTCACA 953
||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||||||
Sbjct 897 GGCAATGCTGAAACGTGCAACGGCTACAACAAACTCCAACAGCCAATCAAGTCGCTCACA 956
Query 954 GTGCATCATTAACATACGAGCATCATGCAATGGCTTTTCCAACGAAACAAAAATGCAGTC 1013
|||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 957 ATGCATCATCAACATACGAGCATCATGCAATGGCTTTTCCAACGAAACAAAATTGCAGTC 1016
Query 1014 TAGTGATGCTATGCTGACGATAGTGGACCTGGCGGGAGCAGAAAGAGAGAAAAGAACTGG 1073
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1017 TAGTGATGCTATGCTGACAATAGTGGACCTGGCGGGAGCAGAAAGAGAGAAAAGAACAGG 1076
Query 1074 AAATCAGG 1081
||||||||
Sbjct 1077 AAATCAGG 1084
Score = 1134 bits (614), Expect = 0.0
Identities = 795/878 (91%), Gaps = 29/878 (3%)
Strand=Plus/Plus
Query 1809 AAGGAATGTCGATAATGATTCTTGCAACCTTATCAAGGCAAGAAGAGAAGCTGGAGCAGA 1868
||||||||||||| | ||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1872 AAGGAATGTCGATGACGATTCTTGCAATCTTATAAAGGCCAGAAGAGAAGCTGGAGCAGA 1931
Query 1869 AGAATCCAGCGAGTCTCCTGTG-CT--A---AGGAATGTCGATGATGATTCTTGCAACCT 1922
||||||||||||| |||||||| || | |||||||||||||||||||||||||||||
Sbjct 1932 AGAATCCAGCGAGACTCCTGTGCCTAAAGTGAGGAATGTCGATGATGATTCTTGCAACCT 1991
Query 1923 TGTCAAGGCAAGAAGAGAAGCTGGAGCAGAAGAATCGAGCGAGTCTCCTGTGC------- 1975
| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1992 TATCAAGGCAAGAAGAGAAGCTGGAGCAGAAGAATCCAGCGAGTCTCCTGTGCTTAGTGT 2051
Query 1976 -C-AAGGAATGTCGATGATGATTCTTGCAACCTTATCAAGGCAAGAAAAGAAGCTGGAGC 2033
| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
Sbjct 2052 GCTAAGGAATGTCGATGATGATTCTTGCAACCTTATCGAGGCAAGAAGAGAAGCTGGCTC 2111
Query 2034 AGAAGAATCCAGCGAGTCTCCTGTGCCTTATGTTGTAAGGAATGTCGATGTTGATTCTTG 2093
||||||||||||| |||||||||| ||| ||| || || ||||||||||||||||||||
Sbjct 2112 AGAAGAATCCAGCAAGTCTCCTGTCCCTAATG-TG--AGAAATGTCGATGTTGATTCTTG 2168
Query 2094 CAACCTTATCAAGCCAAGAGGGGAAGCCAGCGCAGAAGAATCGAGCGAGTCTCCTGTGCC 2153
|||||||||||| || ||| | ||||||||| |||||||||| ||||||||||||||||
Sbjct 2169 CAACCTTATCAATCCCAGAAGAGAAGCCAGCACAGAAGAATCCAGCGAGTCTCCTGTGCT 2228
Query 2154 AAGCAAAAATGTGAAAGATGCTGAGCTTGTTCGATGTCACTTGTCTTC-GCAGAATGATG 2212
|||||||||||||||||||||||| ||||||| ||||||||||||||| | |||||||||
Sbjct 2229 AAGCAAAAATGTGAAAGATGCTGAACTTGTTCCATGTCACTTGTCTTCTG-AGAATGATG 2287
Query 2213 CTGAGCCAAGAGAGTCTGTCAATTCTGAAGAAAATGTGGGGATTCCTTTTGCGACTACTC 2272
| ||||||||| | ||||| |||||||||||||||||||||||||||| | ||| |||||
Sbjct 2288 CAGAGCCAAGACAATCTGTTAATTCTGAAGAAAATGTGGGGATTCCTTCTACGATTACTC 2347
Query 2273 ATGATGAAGCTGAAGTTACTGACTTTCCAAGAGATCAGGCCATCCAGAATCAAGATGATC 2332
||| ||||||||||||||| |||||| ||| || | | || ||||||||||||||||
Sbjct 2348 ATGTTGAAGCTGAAGTTACCGACTTT-CAA-AG---A-G--AT-CAGAATCAAGATGATC 2398
Query 2333 CAACACCTTCACCAGAACAAGTTGAAGTTAGTCAAGATTGCATCAACAGCCGGATGTCTA 2392
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 2399 CAACACCTTCACCAGAACAAGTTGAAGTTAGTCAAGATTGCATCAACAGCGGGCTGTCTA 2458
Query 2393 ATGTTCAAACAAAATCCGCAATATCCCGTAGATTTCCAGATTCAGAGAAAAAAGAAAGAA 2452
| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 2459 ACGTTCAAACAAAATCCGCAATATCCCGCAGATTTCCAGATTCAGAGAAGCAAGAAAGAA 2518
Query 2453 ACAGAAGACTGTTGCCAGTGTCATCCAGATCGCTAACTGAGAAAATGAATGACTTGGACA 2512
|||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |
Sbjct 2519 ACAGAAGACTGTTGCCAGCGTCATCCAGGTCGCTAACTGAGGAAATGAATGACTTGGAGA 2578
Query 2513 TAAAAGAGAACCAGATTGAGAAACCACAGGTTAAAACCGCCAAGACTCGTGTTCAAAAGA 2572
||||||| | ||||| |||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct 2579 TAAAAGATATCCAGACTGAGAAACAACAGGTTAAAACCACCAACACTCGTGTTCAAAAGA 2638
Query 2573 AAGCAGAATCAATCCAAGGTCAGGAAATTGAAGTCCCTGCCCGTGAAGCAGAACCTGCAT 2632
|||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 2639 AAGCAGTATCAATCCAAGGTCAGGAAACTGAAGTCCCTCCCCGTGAAGCAGAACCTGCAT 2698
Query 2633 CAACTAAGAAACAGAGGAATGGACAGAAACCAAAAAGG 2670
||||||||||||||| ||||||||||||||||||||||
Sbjct 2699 CAACTAAGAAACAGAAGAATGGACAGAAACCAAAAAGG 2736
Score = 841 bits (455), Expect = 0.0
Identities = 618/693 (89%), Gaps = 25/693 (4%)
Strand=Plus/Plus
Query 1384 GGAAAGAAAGCTGATCCAGCAGACCGATCATCTCCAAGGCTAGAGCCTGTTTCCCATGAT 1443
|||||||| ||||||||| ||||| |||||||||| ||||| || | |||| |||| |||
Sbjct 1543 GGAAAGAAGGCTGATCCAACAGACAGATCATCTCCGAGGCTGGAACATGTTGCCCAGGAT 1602
Query 1444 AAAAATGAGCGAGAGCACATCATCATGCGGAATTTTTCTAAAGTCTTATGGAATGTTTTG 1503
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1603 AAAAATGAGCGAGAGCACATCATTATGCGGAATTTCTCTAAAGTCTTATGGAATGTTTTG 1662
Query 1504 AAGCAGTACAACGAGAAACTAAAAGTTGCAGAAGGTGAAATTTGCACTCTCAAGGATAGC 1563
||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1663 AAGCAGTGCAACGAGAAACTAAAAGTTGCTGAAGGTGAAATTTTCACTCTCAAGGATAGC 1722
Query 1564 CTTCGAAGAGAACAGCTAAAATCTCTTGTTTTGGAGACAGAGTTGAGCAGTCTCAAGTCC 1623
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 1723 CTTCGAAGAGAACAGCTAAAATCTCTTGGATTGGAGACAGAGTTGATCAGTCTCAAGTCC 1782
Query 1624 TCTTGCCTGGCAGAGCCATGTATACCTGAGGTAGAAGCCTTTGTACATGCAAAAGAAAAC 1683
||||| |||||| |||||||||||||||||||||||| | ||||| ||||||||||| ||
Sbjct 1783 TCTTGTCTGGCACAGCCATGTATACCTGAGGTAGAAGTCATTGTAAATGCAAAAGAACAC 1842
Query 1684 TTTGAGGTTGCCGCGAG-TATGACAAATGTGGTAAGGAATGTTGATGATGATTCTTGCAA 1742
|||||||||| |||| | | |||| || | | ||||||||| ||||| |||||||||||
Sbjct 1843 TTTGAGGTTGACGCG-GCTTTGACTAA--T-GAAAGGAATGTCGATGACGATTCTTGCAA 1898
Query 1743 CCTTATAAAGGTAAGAAGAGAAGCTGGAGCAGAAGAATCCAGCGAGTCTCCTGTGCCTTA 1802
|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1899 TCTTATAAAGGCCAGAAGAGAAGCTGGAGCAGAAGAATCCAGCGAGACTCCTGTGCCTAA 1958
Query 1803 TGTTGTAAGGAATGTCGATAATGATTCTTGCAACCTTATCAAGGCAAGAAGAGAAGCTGG 1862
| || |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1959 AG-TG--AGGAATGTCGATGATGATTCTTGCAACCTTATCAAGGCAAGAAGAGAAGCTGG 2015
Query 1863 AGCAGAAGAATCCAGCGAGTCTCCTGTGCT-A-------A-GGAATGTCGATGATGATTC 1913
|||||||||||||||||||||||||||||| | | |||||||||||||||||||
Sbjct 2016 AGCAGAAGAATCCAGCGAGTCTCCTGTGCTTAGTGTGCTAAGGAATGTCGATGATGATTC 2075
Query 1914 TTGCAACCTTGTCAAGGCAAGAAGAGAAGCTGGAGCAGAAGAATCGAGCGAGTCTCCTGT 1973
|||||||||| || ||||||||||||||||||| |||||||||| ||| ||||||||||
Sbjct 2076 TTGCAACCTTATCGAGGCAAGAAGAGAAGCTGGCTCAGAAGAATCCAGCAAGTCTCCTGT 2135
Query 1974 GCC-AA-G-GA-A--TGTCGATGATGATTCTTGCAACCTTATCAAGGCAAGAAAAGAAGC 2027
|| || | || | |||||||| ||||||||||||||||||||| | |||| ||||||
Sbjct 2136 CCCTAATGTGAGAAATGTCGATGTTGATTCTTGCAACCTTATCAATCCCAGAAGAGAAGC 2195
Query 2028 TGG-AGCAGAAGAATCCAGCGAGTCTCCTGTGC 2059
| | |||||||||||||||||||||||||||
Sbjct 2196 CAGCA-CAGAAGAATCCAGCGAGTCTCCTGTGC 2227
Score = 425 bits (230), Expect = 9e-118
Identities = 234/236 (99%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 1148 TAACAAGGTACTTGCGAGATTACCTAGAGGGAAAAAAGAGGATGGCTTTGATTTTAACTG 1207
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1250 TAACAAGGTACTTGCGAGATTACCTAGAGGGGAAAAAGAGGATGGCTTTGATTTTAACTG 1309
Query 1208 TCAAAGCAGGGGAAGAGGATTATCTTGATACCTCCTATCTTTTGAGACAAGCATCACCGT 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 TCAAAGCAGGGGAAGAGGATTATCTTGATACCTCCTATCTTTTGAGACAAGCATCACCGT 1369
Query 1268 ATATGAAAATCAAATTTGATAACACCGAGGAACCTTGCAACAAGAGACAGCTCAAGACAT 1327
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1370 ATATGAAAATCAAATTTGATAACACTGAGGAACCTTGCAACAAGAGACAGCTCAAGACAT 1429
Query 1328 TTCCAAGAGCTGaaaaaaaCAAGAAGATTAAACTTAGTGCTCCCAAGACTTCCCAA 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1430 TTCCAAGAGCTGAAAAAAACAAGAAGATTAAACTTAGTGCTCCCAAGACTTCCCAA 1485
Score = 327 bits (177), Expect = 3e-88
Identities = 238/266 (89%), Gaps = 10/266 (4%)
Strand=Plus/Plus
Query 1893 AAGGAATGTCGATGATGATTCTTGCAACCTTGTCAAGGCAAGAAGAGAAGCTGGAGCAGA 1952
||||||||||||||| ||||||||||| ||| | ||||| ||||||||||||||||||||
Sbjct 1872 AAGGAATGTCGATGACGATTCTTGCAATCTTATAAAGGCCAGAAGAGAAGCTGGAGCAGA 1931
Query 1953 AGAATCGAGCGAGTCTCCTGTGCC---A---AGGAATGTCGATGATGATTCTTGCAACCT 2006
|||||| |||||| |||||||||| | |||||||||||||||||||||||||||||
Sbjct 1932 AGAATCCAGCGAGACTCCTGTGCCTAAAGTGAGGAATGTCGATGATGATTCTTGCAACCT 1991
Query 2007 TATCAAGGCAAGAAAAGAAGCTGGAGCAGAAGAATCCAGCGAGTCTCCTGTGCCTTA-TG 2065
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1992 TATCAAGGCAAGAAGAGAAGCTGGAGCAGAAGAATCCAGCGAGTCTCCTGTGC-TTAGTG 2050
Query 2066 TTG-TAAGGAATGTCGATGTTGATTCTTGCAACCTTATCAAGCCAAGAGGGGAAGCCAGC 2124
| | ||||||||||||||| ||||||||||||||||||| || ||||| | ||||| ||
Sbjct 2051 T-GCTAAGGAATGTCGATGATGATTCTTGCAACCTTATCGAGGCAAGAAGAGAAGCTGGC 2109
Query 2125 GCAGAAGAATCGAGCGAGTCTCCTGT 2150
|||||||||| ||| ||||||||||
Sbjct 2110 TCAGAAGAATCCAGCAAGTCTCCTGT 2135
Score = 326 bits (176), Expect = 1e-87
Identities = 242/272 (89%), Gaps = 12/272 (4%)
Strand=Plus/Plus
Query 1717 AGGAATGTTGATGATGATTCTTGCAACCTTATAAAGGTAAGAAGAGAAGCTGGAGCAGAA 1776
|||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 1963 AGGAATGTCGATGATGATTCTTGCAACCTTATCAAGGCAAGAAGAGAAGCTGGAGCAGAA 2022
Query 1777 GAATCCAGCGAGTCTCCTGTGCCTTA-TGTTG-TAAGGAATGTCGATAATGATTCTTGCA 1834
|||||||||||||||||||||| ||| ||| | |||||||||||||| ||||||||||||
Sbjct 2023 GAATCCAGCGAGTCTCCTGTGC-TTAGTGT-GCTAAGGAATGTCGATGATGATTCTTGCA 2080
Query 1835 ACCTTATCAAGGCAAGAAGAGAAGCTGGAGCAGAAGAATCCAGCGAGTCTCCTGTGC-TA 1893
|||||||| ||||||||||||||||||| |||||||||||||| |||||||||| | ||
Sbjct 2081 ACCTTATCGAGGCAAGAAGAGAAGCTGGCTCAGAAGAATCCAGCAAGTCTCCTGTCCCTA 2140
Query 1894 A-G-GA-A--TGTCGATGATGATTCTTGCAACCTTGTCAAGGCAAGAAGAGAAGCTGG-A 1947
| | || | |||||||| |||||||||||||||| |||| | ||||||||||| | |
Sbjct 2141 ATGTGAGAAATGTCGATGTTGATTCTTGCAACCTTATCAATCCCAGAAGAGAAGCCAGCA 2200
Query 1948 GCAGAAGAATCGAGCGAGTCTCCTGTGCCAAG 1979
|||||||||| |||||||||||||||| |||
Sbjct 2201 -CAGAAGAATCCAGCGAGTCTCCTGTGCTAAG 2231
Score = 267 bits (144), Expect = 6e-70
Identities = 168/180 (93%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 2704 AGGAGACTCCAACCTGCTTCGTCTGTGTTATTAACAAGAGAAATAAACACTTTAGAAATC 2763
|||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||
Sbjct 2734 AGGAGACTCCAACCTGCTTCTTCTGTGTTATTAACAAGAGAAATAAACACCTTGGAGATA 2793
Query 2764 GAGGATGATATCGCCGAGCCAAAGGGGACCAGAGGTGGAAAGAAGACGACAATGTCACAA 2823
||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||
Sbjct 2794 GAGGATGATATCGCCGAGCCAAAGGTGAACAGAGGTGGAAAGAAGACGACAGTGTCACAA 2853
Query 2824 CCGAGAAGCCAAGGGAGTGTGACTCTCCTCCGCCTCTTAACAAACAATCTTCATCTCTAA 2883
|||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||||||
Sbjct 2854 CCGAGAAGCCAAGGGAGTGTCACTCTCCTCCGCCTCCTCACAAACAACCTTCATCTCTAA 2913
Score = 217 bits (117), Expect = 6e-55
Identities = 157/176 (89%), Gaps = 3/176 (2%)
Strand=Plus/Plus
Query 1977 AAGGAATGTCGATGATGATTCTTGCAACCTTATCAAGGCAAGAAAAGAAGCTGGAGCAGA 2036
||||||||||||||| ||||||||||| ||||| ||||| |||| |||||||||||||||
Sbjct 1872 AAGGAATGTCGATGACGATTCTTGCAATCTTATAAAGGCCAGAAGAGAAGCTGGAGCAGA 1931
Query 2037 AGAATCCAGCGAGTCTCCTGTGCCTTATGTTGTAAGGAATGTCGATGTTGATTCTTGCAA 2096
||||||||||||| ||||||||||| | || | | |||||||||||| ||||||||||||
Sbjct 1932 AGAATCCAGCGAGACTCCTGTGCCTAAAGT-G-A-GGAATGTCGATGATGATTCTTGCAA 1988
Query 2097 CCTTATCAAGCCAAGAGGGGAAGCCAGCGCAGAAGAATCGAGCGAGTCTCCTGTGC 2152
|||||||||| ||||| | ||||| | ||||||||||| ||||||||||||||||
Sbjct 1989 CCTTATCAAGGCAAGAAGAGAAGCTGGAGCAGAAGAATCCAGCGAGTCTCCTGTGC 2044
Score = 213 bits (115), Expect = 8e-54
Identities = 164/187 (88%), Gaps = 5/187 (3%)
Strand=Plus/Plus
Query 1710 TGTGGTAAGGAATGTTGATGATGATTCTTGCAACCTTATAAAGGTAAGAAGAGAAGCTGG 1769
|||| |||||||||| ||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 2049 TGTGCTAAGGAATGTCGATGATGATTCTTGCAACCTTATCGAGGCAAGAAGAGAAGCTGG 2108
Query 1770 AGCAGAAGAATCCAGCGAGTCTCCTGTGCCTTATGTTGTAAGGAATGTCGATAATGATTC 1829
|||||||||||||| |||||||||| ||| ||| || || ||||||||| ||||||
Sbjct 2109 CTCAGAAGAATCCAGCAAGTCTCCTGTCCCTAATG-TG--AGAAATGTCGATGTTGATTC 2165
Query 1830 TTGCAACCTTATCAAGGCAAGAAGAGAAG-CTGGAGCAGAAGAATCCAGCGAGTCTCCTG 1888
||||||||||||||| | |||||||||| | | | ||||||||||||||||||||||||
Sbjct 2166 TTGCAACCTTATCAATCCCAGAAGAGAAGCCAGCA-CAGAAGAATCCAGCGAGTCTCCTG 2224
Query 1889 TGCTAAG 1895
|||||||
Sbjct 2225 TGCTAAG 2231
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143276789208
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5